Protein–RNA interactions for Protein: Q8N8U3

RTL3, Retrotransposon Gag-like protein 3, humanhuman

Known RBP Predictions only

Length 475 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL3Q8N8U3 MIR3670-3-201ENST00000584855 65 ntBASIC2.54□□□□□ -2
RTL3Q8N8U3 AC025165.5-201ENST00000602802 578 ntBASIC2.54□□□□□ -2
RTL3Q8N8U3 AC025449.1-201ENST00000603896 529 ntBASIC2.54□□□□□ -2
RTL3Q8N8U3 AC007621.1-201ENST00000604544 437 ntBASIC2.54□□□□□ -2
RTL3Q8N8U3 AL121992.2-201ENST00000606262 256 ntBASIC2.54□□□□□ -2
RTL3Q8N8U3 MIR3670-4-201ENST00000612260 65 ntBASIC2.54□□□□□ -2
RTL3Q8N8U3 CDC27P3-201ENST00000635418 1910 ntBASIC2.54□□□□□ -2
RTL3Q8N8U3 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
RTL3Q8N8U3 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
RTL3Q8N8U3 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.53□□□□□ -2
RTL3Q8N8U3 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.53□□□□□ -2
RTL3Q8N8U3 AC093536.2-201ENST00000565257 1406 ntBASIC2.53□□□□□ -2
RTL3Q8N8U3 OFD1P6Y-202ENST00000451061 2724 ntBASIC2.53□□□□□ -2
RTL3Q8N8U3 Y_RNA.33-201ENST00000362591 102 ntBASIC2.53□□□□□ -2
RTL3Q8N8U3 SNORA4.3-201ENST00000365564 137 ntBASIC2.53□□□□□ -2
RTL3Q8N8U3 RNU6-898P-201ENST00000365627 104 ntBASIC2.53□□□□□ -2
RTL3Q8N8U3 RNU6-456P-201ENST00000384493 107 ntBASIC2.53□□□□□ -2
RTL3Q8N8U3 Y_RNA.554-201ENST00000384672 102 ntBASIC2.53□□□□□ -2
RTL3Q8N8U3 RNU6-606P-201ENST00000384721 111 ntBASIC2.53□□□□□ -2
RTL3Q8N8U3 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.53□□□□□ -2
RTL3Q8N8U3 CIR1P3-201ENST00000405137 479 ntBASIC2.53□□□□□ -2
RTL3Q8N8U3 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC2.53□□□□□ -2
RTL3Q8N8U3 CYCSP48-201ENST00000417124 323 ntBASIC2.53□□□□□ -2
RTL3Q8N8U3 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC2.53□□□□□ -2
RTL3Q8N8U3 EIF1P1-201ENST00000421436 341 ntBASIC2.53□□□□□ -2
RTL3Q8N8U3 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC2.53□□□□□ -2
RTL3Q8N8U3 MTATP6P16-201ENST00000434543 526 ntBASIC2.53□□□□□ -2
RTL3Q8N8U3 UBE2V1P8-201ENST00000437166 265 ntBASIC2.53□□□□□ -2
RTL3Q8N8U3 RPS12P2-201ENST00000439728 269 ntBASIC2.53□□□□□ -2
RTL3Q8N8U3 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC2.53□□□□□ -2
RTL3Q8N8U3 FGF7P6-202ENST00000451282 293 ntBASIC2.53□□□□□ -2
RTL3Q8N8U3 AP000705.1-201ENST00000454567 350 ntBASIC2.53□□□□□ -2
RTL3Q8N8U3 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC2.53□□□□□ -2
RTL3Q8N8U3 AC133134.1-201ENST00000466800 359 ntBASIC2.53□□□□□ -2
RTL3Q8N8U3 AC079382.1-201ENST00000493346 557 ntBASIC2.53□□□□□ -2
RTL3Q8N8U3 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC2.53□□□□□ -2
RTL3Q8N8U3 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC2.53□□□□□ -2
RTL3Q8N8U3 AC109927.2-201ENST00000506416 303 ntBASIC2.53□□□□□ -2
RTL3Q8N8U3 AC009646.1-201ENST00000510455 318 ntBASIC2.53□□□□□ -2
RTL3Q8N8U3 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC2.53□□□□□ -2
RTL3Q8N8U3 Y_RNA.689-201ENST00000516589 107 ntBASIC2.53□□□□□ -2
RTL3Q8N8U3 ACA59.2-201ENST00000517061 156 ntBASIC2.53□□□□□ -2
RTL3Q8N8U3 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC2.53□□□□□ -2
RTL3Q8N8U3 AP001646.1-201ENST00000527936 915 ntBASIC2.53□□□□□ -2
RTL3Q8N8U3 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC2.53□□□□□ -2
RTL3Q8N8U3 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.53□□□□□ -2
RTL3Q8N8U3 MIR1273C-201ENST00000578669 77 ntBASIC2.53□□□□□ -2
RTL3Q8N8U3 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC2.53□□□□□ -2
RTL3Q8N8U3 AC098848.2-201ENST00000588023 330 ntBASIC2.53□□□□□ -2
RTL3Q8N8U3 AC093648.1-201ENST00000623546 606 ntBASIC2.53□□□□□ -2
RTL3Q8N8U3 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.53□□□□□ -2
RTL3Q8N8U3 MTND5P17-201ENST00000418405 1603 ntBASIC2.53□□□□□ -2
RTL3Q8N8U3 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
RTL3Q8N8U3 Y_RNA.111-201ENST00000363248 100 ntBASIC2.52□□□□□ -2.01
RTL3Q8N8U3 RNU6-395P-201ENST00000365662 106 ntBASIC2.52□□□□□ -2.01
RTL3Q8N8U3 Z98749.2-208ENST00000381646 500 ntBASIC2.52□□□□□ -2.01
RTL3Q8N8U3 AL359511.1-201ENST00000402970 211 ntBASIC2.52□□□□□ -2.01
RTL3Q8N8U3 MIR548F1-201ENST00000408667 84 ntBASIC2.52□□□□□ -2.01
RTL3Q8N8U3 RNU2-39P-201ENST00000410604 198 ntBASIC2.52□□□□□ -2.01
RTL3Q8N8U3 AC092809.3-201ENST00000415453 231 ntBASIC2.52□□□□□ -2.01
RTL3Q8N8U3 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC2.52□□□□□ -2.01
RTL3Q8N8U3 AC236972.1-201ENST00000433225 199 ntBASIC2.52□□□□□ -2.01
RTL3Q8N8U3 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC2.52□□□□□ -2.01
RTL3Q8N8U3 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
RTL3Q8N8U3 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC2.52□□□□□ -2.01
RTL3Q8N8U3 AL139109.1-201ENST00000455491 297 ntBASIC2.52□□□□□ -2.01
RTL3Q8N8U3 AL356010.1-201ENST00000456364 102 ntBASIC2.52□□□□□ -2.01
RTL3Q8N8U3 MIR892C-201ENST00000516410 77 ntBASIC2.52□□□□□ -2.01
RTL3Q8N8U3 Y_RNA.693-201ENST00000516641 110 ntBASIC2.52□□□□□ -2.01
RTL3Q8N8U3 MTND4LP26-201ENST00000518144 282 ntBASIC2.52□□□□□ -2.01
RTL3Q8N8U3 RPL7P20-201ENST00000520308 745 ntBASIC2.52□□□□□ -2.01
RTL3Q8N8U3 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC2.52□□□□□ -2.01
RTL3Q8N8U3 AC104383.1-201ENST00000530297 370 ntBASIC2.52□□□□□ -2.01
RTL3Q8N8U3 AK6P1-201ENST00000540219 478 ntBASIC2.52□□□□□ -2.01
RTL3Q8N8U3 AL512310.1-201ENST00000548639 172 ntBASIC2.52□□□□□ -2.01
RTL3Q8N8U3 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.52□□□□□ -2.01
RTL3Q8N8U3 HMGB1P33-201ENST00000563485 527 ntBASIC2.52□□□□□ -2.01
RTL3Q8N8U3 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC2.52□□□□□ -2.01
RTL3Q8N8U3 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC2.52□□□□□ -2.01
RTL3Q8N8U3 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.52□□□□□ -2.01
RTL3Q8N8U3 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.52□□□□□ -2.01
RTL3Q8N8U3 SEPT14P19-203ENST00000633205 211 ntBASIC2.52□□□□□ -2.01
RTL3Q8N8U3 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.52□□□□□ -2.01
RTL3Q8N8U3 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC2.52□□□□□ -2.01
RTL3Q8N8U3 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
RTL3Q8N8U3 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC2.52□□□□□ -2.01
RTL3Q8N8U3 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
RTL3Q8N8U3 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC2.52□□□□□ -2.01
RTL3Q8N8U3 ZNF680P1-201ENST00000436625 1469 ntBASIC2.52□□□□□ -2.01
RTL3Q8N8U3 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.51□□□□□ -2.01
RTL3Q8N8U3 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
RTL3Q8N8U3 MIR454-201ENST00000390180 115 ntBASIC2.51□□□□□ -2.01
RTL3Q8N8U3 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
RTL3Q8N8U3 RNU6-780P-201ENST00000391030 104 ntBASIC2.51□□□□□ -2.01
RTL3Q8N8U3 CD3D-202ENST00000392884 476 ntTSL 2 BASIC2.51□□□□□ -2.01
RTL3Q8N8U3 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.51□□□□□ -2.01
RTL3Q8N8U3 AL109913.1-201ENST00000421173 514 ntBASIC2.51□□□□□ -2.01
RTL3Q8N8U3 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC2.51□□□□□ -2.01
RTL3Q8N8U3 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC2.51□□□□□ -2.01
RTL3Q8N8U3 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC2.51□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 124.9 ms