Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 AC023157.2-201ENST00000540596 141 ntBASIC3.78□□□□□ -1.8
TRIM48Q8IWZ4 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.78□□□□□ -1.8
TRIM48Q8IWZ4 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.78□□□□□ -1.8
TRIM48Q8IWZ4 AC020895.1-201ENST00000595362 272 ntBASIC3.78□□□□□ -1.8
TRIM48Q8IWZ4 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC3.78□□□□□ -1.8
TRIM48Q8IWZ4 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC3.78□□□□□ -1.8
TRIM48Q8IWZ4 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
TRIM48Q8IWZ4 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
TRIM48Q8IWZ4 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.78□□□□□ -1.8
TRIM48Q8IWZ4 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
TRIM48Q8IWZ4 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.77□□□□□ -1.81
TRIM48Q8IWZ4 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.77□□□□□ -1.81
TRIM48Q8IWZ4 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.77□□□□□ -1.81
TRIM48Q8IWZ4 AC010615.1-201ENST00000594254 1764 ntBASIC3.77□□□□□ -1.81
TRIM48Q8IWZ4 USP8P1-201ENST00000494673 3183 ntBASIC3.77□□□□□ -1.81
TRIM48Q8IWZ4 Y_RNA.105-201ENST00000363182 111 ntBASIC3.77□□□□□ -1.81
TRIM48Q8IWZ4 RNU6-527P-201ENST00000363425 104 ntBASIC3.77□□□□□ -1.81
TRIM48Q8IWZ4 Y_RNA.489-201ENST00000384410 101 ntBASIC3.77□□□□□ -1.81
TRIM48Q8IWZ4 SNORA48.7-201ENST00000391302 135 ntBASIC3.77□□□□□ -1.81
TRIM48Q8IWZ4 MIR190B-201ENST00000401119 79 ntBASIC3.77□□□□□ -1.81
TRIM48Q8IWZ4 RPS29P13-201ENST00000402041 169 ntBASIC3.77□□□□□ -1.81
TRIM48Q8IWZ4 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC3.77□□□□□ -1.81
TRIM48Q8IWZ4 AL139247.1-201ENST00000422768 325 ntBASIC3.77□□□□□ -1.81
TRIM48Q8IWZ4 FTH1P6-201ENST00000430768 320 ntBASIC3.77□□□□□ -1.81
TRIM48Q8IWZ4 NDUFB4P6-201ENST00000436819 366 ntBASIC3.77□□□□□ -1.81
TRIM48Q8IWZ4 AC083863.1-201ENST00000438811 231 ntBASIC3.77□□□□□ -1.81
TRIM48Q8IWZ4 Z98949.2-201ENST00000440996 144 ntBASIC3.77□□□□□ -1.81
TRIM48Q8IWZ4 SNORD127-201ENST00000458892 86 ntBASIC3.77□□□□□ -1.81
TRIM48Q8IWZ4 RNU6-1132P-201ENST00000459214 107 ntBASIC3.77□□□□□ -1.81
TRIM48Q8IWZ4 RPL30P10-201ENST00000488148 337 ntBASIC3.77□□□□□ -1.81
TRIM48Q8IWZ4 RNA5SP164-201ENST00000516533 110 ntBASIC3.77□□□□□ -1.81
TRIM48Q8IWZ4 RNA5SP143-201ENST00000516936 115 ntBASIC3.77□□□□□ -1.81
TRIM48Q8IWZ4 AC109329.1-201ENST00000518744 317 ntBASIC3.77□□□□□ -1.81
TRIM48Q8IWZ4 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC3.77□□□□□ -1.81
TRIM48Q8IWZ4 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC3.77□□□□□ -1.81
TRIM48Q8IWZ4 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3.77□□□□□ -1.81
TRIM48Q8IWZ4 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC3.77□□□□□ -1.81
TRIM48Q8IWZ4 AC008962.1-201ENST00000605729 304 ntBASIC3.77□□□□□ -1.81
TRIM48Q8IWZ4 FTX_3.1-201ENST00000610451 147 ntBASIC3.77□□□□□ -1.81
TRIM48Q8IWZ4 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
TRIM48Q8IWZ4 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
TRIM48Q8IWZ4 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.77□□□□□ -1.81
TRIM48Q8IWZ4 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC3.77□□□□□ -1.81
TRIM48Q8IWZ4 HSPA8P1-201ENST00000425843 1833 ntBASIC3.77□□□□□ -1.81
TRIM48Q8IWZ4 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.77□□□□□ -1.81
TRIM48Q8IWZ4 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC3.76□□□□□ -1.81
TRIM48Q8IWZ4 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
TRIM48Q8IWZ4 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.76□□□□□ -1.81
TRIM48Q8IWZ4 Y_RNA.276-201ENST00000364732 109 ntBASIC3.76□□□□□ -1.81
TRIM48Q8IWZ4 RNA5SP189-201ENST00000364920 115 ntBASIC3.76□□□□□ -1.81
TRIM48Q8IWZ4 RNA5SP167-201ENST00000365461 116 ntBASIC3.76□□□□□ -1.81
TRIM48Q8IWZ4 SNORA12.2-201ENST00000391040 156 ntBASIC3.76□□□□□ -1.81
TRIM48Q8IWZ4 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
TRIM48Q8IWZ4 RNU6ATAC23P-201ENST00000408448 123 ntBASIC3.76□□□□□ -1.81
TRIM48Q8IWZ4 RNU2-38P-201ENST00000410856 79 ntBASIC3.76□□□□□ -1.81
TRIM48Q8IWZ4 RNU6-130P-201ENST00000411112 103 ntBASIC3.76□□□□□ -1.81
TRIM48Q8IWZ4 AL445584.1-201ENST00000431451 330 ntBASIC3.76□□□□□ -1.81
TRIM48Q8IWZ4 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
TRIM48Q8IWZ4 FCF1P4-201ENST00000448326 183 ntBASIC3.76□□□□□ -1.81
TRIM48Q8IWZ4 RPL31P13-201ENST00000484151 370 ntBASIC3.76□□□□□ -1.81
TRIM48Q8IWZ4 RNU2-53P-201ENST00000516257 147 ntBASIC3.76□□□□□ -1.81
TRIM48Q8IWZ4 RNU6-703P-201ENST00000516946 107 ntBASIC3.76□□□□□ -1.81
TRIM48Q8IWZ4 AC010186.2-204ENST00000537668 439 ntBASIC3.76□□□□□ -1.81
TRIM48Q8IWZ4 LINC00933-203ENST00000559812 219 ntBASIC3.76□□□□□ -1.81
TRIM48Q8IWZ4 AC087499.8-201ENST00000578406 226 ntBASIC3.76□□□□□ -1.81
TRIM48Q8IWZ4 AC006077.1-201ENST00000604746 343 ntBASIC3.76□□□□□ -1.81
TRIM48Q8IWZ4 AC011373.1-201ENST00000607270 237 ntBASIC3.76□□□□□ -1.81
TRIM48Q8IWZ4 DLEU2_2.2-201ENST00000615474 90 ntBASIC3.76□□□□□ -1.81
TRIM48Q8IWZ4 AC027309.3-201ENST00000623419 351 ntBASIC3.76□□□□□ -1.81
TRIM48Q8IWZ4 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
TRIM48Q8IWZ4 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.76□□□□□ -1.81
TRIM48Q8IWZ4 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
TRIM48Q8IWZ4 AC010733.2-201ENST00000589496 5702 ntBASIC3.75□□□□□ -1.81
TRIM48Q8IWZ4 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC3.75□□□□□ -1.81
TRIM48Q8IWZ4 AP001486.2-201ENST00000561652 5113 ntBASIC3.75□□□□□ -1.81
TRIM48Q8IWZ4 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.75□□□□□ -1.81
TRIM48Q8IWZ4 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC3.75□□□□□ -1.81
TRIM48Q8IWZ4 OR56A5-201ENST00000340110 738 ntBASIC3.75□□□□□ -1.81
TRIM48Q8IWZ4 RNU6-50P-201ENST00000362356 103 ntBASIC3.75□□□□□ -1.81
TRIM48Q8IWZ4 RNU6-105P-201ENST00000363909 104 ntBASIC3.75□□□□□ -1.81
TRIM48Q8IWZ4 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
TRIM48Q8IWZ4 Y_RNA.477-201ENST00000384352 108 ntBASIC3.75□□□□□ -1.81
TRIM48Q8IWZ4 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
TRIM48Q8IWZ4 PTMAP2-201ENST00000397627 327 ntBASIC3.75□□□□□ -1.81
TRIM48Q8IWZ4 U3.37-201ENST00000408528 213 ntBASIC3.75□□□□□ -1.81
TRIM48Q8IWZ4 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC3.75□□□□□ -1.81
TRIM48Q8IWZ4 AL356968.1-201ENST00000416622 474 ntBASIC3.75□□□□□ -1.81
TRIM48Q8IWZ4 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.75□□□□□ -1.81
TRIM48Q8IWZ4 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC3.75□□□□□ -1.81
TRIM48Q8IWZ4 ARL5AP4-201ENST00000430731 512 ntBASIC3.75□□□□□ -1.81
TRIM48Q8IWZ4 Z82188.1-201ENST00000436709 154 ntBASIC3.75□□□□□ -1.81
TRIM48Q8IWZ4 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
TRIM48Q8IWZ4 RPL21P129-201ENST00000491732 478 ntBASIC3.75□□□□□ -1.81
TRIM48Q8IWZ4 RPL23AP49-201ENST00000492925 468 ntBASIC3.75□□□□□ -1.81
TRIM48Q8IWZ4 RPL30P5-201ENST00000494923 336 ntBASIC3.75□□□□□ -1.81
TRIM48Q8IWZ4 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC3.75□□□□□ -1.81
TRIM48Q8IWZ4 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC3.75□□□□□ -1.81
TRIM48Q8IWZ4 AC074250.1-201ENST00000511117 192 ntBASIC3.75□□□□□ -1.81
TRIM48Q8IWZ4 AC010265.1-201ENST00000513509 211 ntBASIC3.75□□□□□ -1.81
TRIM48Q8IWZ4 SNORA43.2-201ENST00000516652 128 ntBASIC3.75□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 145.6 ms