Protein–RNA interactions for Protein: Q8IWA6

CCDC60, Coiled-coil domain-containing protein 60, humanhuman

Predicted RBP Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60Q8IWA6 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC2.58□□□□□ -2
CCDC60Q8IWA6 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC2.58□□□□□ -2
CCDC60Q8IWA6 AC000111.3-201ENST00000433478 193 ntBASIC2.58□□□□□ -2
CCDC60Q8IWA6 AL596276.1-201ENST00000434465 418 ntBASIC2.58□□□□□ -2
CCDC60Q8IWA6 RPS15AP7-201ENST00000439294 405 ntBASIC2.58□□□□□ -2
CCDC60Q8IWA6 AC098831.1-201ENST00000440661 216 ntBASIC2.58□□□□□ -2
CCDC60Q8IWA6 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.58□□□□□ -2
CCDC60Q8IWA6 RPL23AP49-201ENST00000492925 468 ntBASIC2.58□□□□□ -2
CCDC60Q8IWA6 RPS27P27-201ENST00000498779 255 ntBASIC2.58□□□□□ -2
CCDC60Q8IWA6 AC092436.1-201ENST00000506450 503 ntBASIC2.58□□□□□ -2
CCDC60Q8IWA6 AC112206.3-201ENST00000514578 389 ntBASIC2.58□□□□□ -2
CCDC60Q8IWA6 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC2.58□□□□□ -2
CCDC60Q8IWA6 COX6CP5-201ENST00000527162 228 ntBASIC2.58□□□□□ -2
CCDC60Q8IWA6 OR5BN1P-201ENST00000532955 829 ntBASIC2.58□□□□□ -2
CCDC60Q8IWA6 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC2.58□□□□□ -2
CCDC60Q8IWA6 MIR4703-201ENST00000577728 79 ntBASIC2.58□□□□□ -2
CCDC60Q8IWA6 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC2.58□□□□□ -2
CCDC60Q8IWA6 AC008945.2-201ENST00000606056 604 ntBASIC2.58□□□□□ -2
CCDC60Q8IWA6 AC087241.4-201ENST00000612441 480 ntBASIC2.58□□□□□ -2
CCDC60Q8IWA6 ATM-228ENST00000639240 498 ntTSL 5 BASIC2.58□□□□□ -2
CCDC60Q8IWA6 ATM-230ENST00000640388 578 ntTSL 5 BASIC2.58□□□□□ -2
CCDC60Q8IWA6 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
CCDC60Q8IWA6 AC080100.1-201ENST00000624239 5356 ntBASIC2.57□□□□□ -2
CCDC60Q8IWA6 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC2.57□□□□□ -2
CCDC60Q8IWA6 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.57□□□□□ -2
CCDC60Q8IWA6 MIR6073-201ENST00000352083 89 ntBASIC2.57□□□□□ -2
CCDC60Q8IWA6 RNU6-898P-201ENST00000365627 104 ntBASIC2.57□□□□□ -2
CCDC60Q8IWA6 SNORA40C-201ENST00000391285 128 ntBASIC2.57□□□□□ -2
CCDC60Q8IWA6 RPL21P90-201ENST00000415692 466 ntBASIC2.57□□□□□ -2
CCDC60Q8IWA6 MTCYBP5-201ENST00000423752 1135 ntBASIC2.57□□□□□ -2
CCDC60Q8IWA6 DNAJC19P4-201ENST00000440115 345 ntBASIC2.57□□□□□ -2
CCDC60Q8IWA6 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC2.57□□□□□ -2
CCDC60Q8IWA6 HMGN2P10-201ENST00000448085 265 ntBASIC2.57□□□□□ -2
CCDC60Q8IWA6 AL118520.1-201ENST00000450770 291 ntBASIC2.57□□□□□ -2
CCDC60Q8IWA6 TPTE2P5-203ENST00000458118 728 ntBASIC2.57□□□□□ -2
CCDC60Q8IWA6 OARD1-209ENST00000471367 401 ntTSL 2 BASIC2.57□□□□□ -2
CCDC60Q8IWA6 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC2.57□□□□□ -2
CCDC60Q8IWA6 SNORA31.15-201ENST00000516771 132 ntBASIC2.57□□□□□ -2
CCDC60Q8IWA6 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC2.57□□□□□ -2
CCDC60Q8IWA6 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC2.57□□□□□ -2
CCDC60Q8IWA6 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC2.57□□□□□ -2
CCDC60Q8IWA6 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC2.57□□□□□ -2
CCDC60Q8IWA6 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC2.57□□□□□ -2
CCDC60Q8IWA6 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC2.57□□□□□ -2
CCDC60Q8IWA6 AL121821.2-201ENST00000556081 394 ntBASIC2.57□□□□□ -2
CCDC60Q8IWA6 AC021739.1-201ENST00000559631 174 ntBASIC2.57□□□□□ -2
CCDC60Q8IWA6 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC2.57□□□□□ -2
CCDC60Q8IWA6 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.57□□□□□ -2
CCDC60Q8IWA6 MTATP6P3-201ENST00000581686 676 ntBASIC2.57□□□□□ -2
CCDC60Q8IWA6 AC060766.3-201ENST00000591442 263 ntBASIC2.57□□□□□ -2
CCDC60Q8IWA6 AC073534.2-201ENST00000620377 381 ntBASIC2.57□□□□□ -2
CCDC60Q8IWA6 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
CCDC60Q8IWA6 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
CCDC60Q8IWA6 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
CCDC60Q8IWA6 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
CCDC60Q8IWA6 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.56□□□□□ -2
CCDC60Q8IWA6 U8.2-201ENST00000363156 134 ntBASIC2.56□□□□□ -2
CCDC60Q8IWA6 U8.8-201ENST00000365399 135 ntBASIC2.56□□□□□ -2
CCDC60Q8IWA6 Z98749.2-208ENST00000381646 500 ntBASIC2.56□□□□□ -2
CCDC60Q8IWA6 RNU6-166P-201ENST00000384371 107 ntBASIC2.56□□□□□ -2
CCDC60Q8IWA6 MTCO3P40-201ENST00000392516 676 ntBASIC2.56□□□□□ -2
CCDC60Q8IWA6 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.56□□□□□ -2
CCDC60Q8IWA6 RNA5SP425-201ENST00000410336 112 ntBASIC2.56□□□□□ -2
CCDC60Q8IWA6 MTCYBP8-201ENST00000422855 651 ntBASIC2.56□□□□□ -2
CCDC60Q8IWA6 AL139415.2-201ENST00000431968 163 ntBASIC2.56□□□□□ -2
CCDC60Q8IWA6 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.56□□□□□ -2
CCDC60Q8IWA6 MTND1P1-201ENST00000445453 368 ntBASIC2.56□□□□□ -2
CCDC60Q8IWA6 AC003071.1-201ENST00000451219 789 ntBASIC2.56□□□□□ -2
CCDC60Q8IWA6 AC092001.1-201ENST00000453012 261 ntBASIC2.56□□□□□ -2
CCDC60Q8IWA6 TRBV1-201ENST00000476502 284 ntBASIC2.56□□□□□ -2
CCDC60Q8IWA6 FAM92A1P2-202ENST00000504766 877 ntBASIC2.56□□□□□ -2
CCDC60Q8IWA6 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC2.56□□□□□ -2
CCDC60Q8IWA6 AC113155.1-201ENST00000511141 769 ntBASIC2.56□□□□□ -2
CCDC60Q8IWA6 RNU6ATAC13P-201ENST00000516152 131 ntBASIC2.56□□□□□ -2
CCDC60Q8IWA6 RNU6-581P-201ENST00000516214 105 ntBASIC2.56□□□□□ -2
CCDC60Q8IWA6 RNU6-1178P-201ENST00000516674 107 ntBASIC2.56□□□□□ -2
CCDC60Q8IWA6 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC2.56□□□□□ -2
CCDC60Q8IWA6 AC006199.1-201ENST00000548728 219 ntBASIC2.56□□□□□ -2
CCDC60Q8IWA6 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC2.56□□□□□ -2
CCDC60Q8IWA6 AC009163.5-201ENST00000575421 637 ntBASIC2.56□□□□□ -2
CCDC60Q8IWA6 AL645944.1-201ENST00000603857 493 ntBASIC2.56□□□□□ -2
CCDC60Q8IWA6 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.56□□□□□ -2
CCDC60Q8IWA6 AP001596.2-201ENST00000608410 312 ntBASIC2.56□□□□□ -2
CCDC60Q8IWA6 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC2.56□□□□□ -2
CCDC60Q8IWA6 AP001486.3-201ENST00000615334 372 ntBASIC2.56□□□□□ -2
CCDC60Q8IWA6 AL354950.2-201ENST00000617939 290 ntBASIC2.56□□□□□ -2
CCDC60Q8IWA6 U6.42-201ENST00000618440 107 ntBASIC2.56□□□□□ -2
CCDC60Q8IWA6 AC124864.2-201ENST00000624736 186 ntBASIC2.56□□□□□ -2
CCDC60Q8IWA6 AC099654.12-201ENST00000639868 649 ntBASIC2.56□□□□□ -2
CCDC60Q8IWA6 AC093536.2-201ENST00000565257 1406 ntBASIC2.56□□□□□ -2
CCDC60Q8IWA6 ZNF271P-202ENST00000465539 1970 ntBASIC2.56□□□□□ -2
CCDC60Q8IWA6 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.56□□□□□ -2
CCDC60Q8IWA6 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.56□□□□□ -2
CCDC60Q8IWA6 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
CCDC60Q8IWA6 RNU6-461P-201ENST00000364195 107 ntBASIC2.55□□□□□ -2
CCDC60Q8IWA6 RNU6-750P-201ENST00000390946 107 ntBASIC2.55□□□□□ -2
CCDC60Q8IWA6 RNU6-1158P-201ENST00000391167 107 ntBASIC2.55□□□□□ -2
CCDC60Q8IWA6 MIR1261-201ENST00000408659 82 ntBASIC2.55□□□□□ -2
CCDC60Q8IWA6 RNU4-46P-201ENST00000410818 138 ntBASIC2.55□□□□□ -2
CCDC60Q8IWA6 RN7SKP284-201ENST00000411002 343 ntBASIC2.55□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 127.3 ms