Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 AC005771.1-201ENST00000585581 349 ntBASIC1.91□□□□□ -2.1
NUDCD3Q8IVD9 BNIP3P30-201ENST00000601184 574 ntBASIC1.91□□□□□ -2.1
NUDCD3Q8IVD9 SNRPGP19-201ENST00000603826 189 ntBASIC1.91□□□□□ -2.1
NUDCD3Q8IVD9 AC093788.1-201ENST00000609356 927 ntBASIC1.91□□□□□ -2.1
NUDCD3Q8IVD9 AL627230.6-201ENST00000611129 280 ntBASIC1.91□□□□□ -2.1
NUDCD3Q8IVD9 AF246928.1-201ENST00000623768 87 ntBASIC1.91□□□□□ -2.1
NUDCD3Q8IVD9 AC091932.3-201ENST00000624223 323 ntBASIC1.91□□□□□ -2.1
NUDCD3Q8IVD9 AL157786.1-207ENST00000627771 695 ntBASIC1.91□□□□□ -2.1
NUDCD3Q8IVD9 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC1.91□□□□□ -2.1
NUDCD3Q8IVD9 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
NUDCD3Q8IVD9 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC1.9□□□□□ -2.1
NUDCD3Q8IVD9 MTND4P4-201ENST00000439033 1366 ntBASIC1.9□□□□□ -2.11
NUDCD3Q8IVD9 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC1.9□□□□□ -2.11
NUDCD3Q8IVD9 SNORD114-19-201ENST00000363072 75 ntBASIC1.9□□□□□ -2.11
NUDCD3Q8IVD9 RNA5SP240-201ENST00000365355 128 ntBASIC1.9□□□□□ -2.11
NUDCD3Q8IVD9 SNORA20.2-201ENST00000383922 131 ntBASIC1.9□□□□□ -2.11
NUDCD3Q8IVD9 RNU6-1179P-201ENST00000384667 107 ntBASIC1.9□□□□□ -2.11
NUDCD3Q8IVD9 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
NUDCD3Q8IVD9 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
NUDCD3Q8IVD9 AL031577.2-201ENST00000404133 280 ntBASIC1.9□□□□□ -2.11
NUDCD3Q8IVD9 MORN2-203ENST00000409131 544 ntTSL 5 BASIC1.9□□□□□ -2.11
NUDCD3Q8IVD9 AL030996.1-201ENST00000411430 235 ntBASIC1.9□□□□□ -2.11
NUDCD3Q8IVD9 AC127391.1-201ENST00000411737 98 ntBASIC1.9□□□□□ -2.11
NUDCD3Q8IVD9 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC1.9□□□□□ -2.11
NUDCD3Q8IVD9 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC1.9□□□□□ -2.11
NUDCD3Q8IVD9 MTND4P20-201ENST00000424125 869 ntBASIC1.9□□□□□ -2.11
NUDCD3Q8IVD9 AIMP1P2-201ENST00000425294 312 ntBASIC1.9□□□□□ -2.11
NUDCD3Q8IVD9 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC1.9□□□□□ -2.11
NUDCD3Q8IVD9 AC104850.1-201ENST00000435940 476 ntBASIC1.9□□□□□ -2.11
NUDCD3Q8IVD9 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC1.9□□□□□ -2.11
NUDCD3Q8IVD9 AL161788.1-201ENST00000441805 169 ntBASIC1.9□□□□□ -2.11
NUDCD3Q8IVD9 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC1.9□□□□□ -2.11
NUDCD3Q8IVD9 CYP2C59P-201ENST00000457790 269 ntBASIC1.9□□□□□ -2.11
NUDCD3Q8IVD9 AC117503.1-201ENST00000472241 394 ntBASIC1.9□□□□□ -2.11
NUDCD3Q8IVD9 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC1.9□□□□□ -2.11
NUDCD3Q8IVD9 HMGB3P17-201ENST00000504195 649 ntBASIC1.9□□□□□ -2.11
NUDCD3Q8IVD9 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC1.9□□□□□ -2.11
NUDCD3Q8IVD9 PSMA3P-201ENST00000555485 635 ntBASIC1.9□□□□□ -2.11
NUDCD3Q8IVD9 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC1.9□□□□□ -2.11
NUDCD3Q8IVD9 MIR4529-201ENST00000578110 78 ntBASIC1.9□□□□□ -2.11
NUDCD3Q8IVD9 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.9□□□□□ -2.11
NUDCD3Q8IVD9 MIR4287-201ENST00000579398 78 ntBASIC1.9□□□□□ -2.11
NUDCD3Q8IVD9 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
NUDCD3Q8IVD9 AC078899.2-201ENST00000595282 212 ntBASIC1.9□□□□□ -2.11
NUDCD3Q8IVD9 AL138889.2-201ENST00000603883 242 ntBASIC1.9□□□□□ -2.11
NUDCD3Q8IVD9 NDUFA8P1-201ENST00000605525 367 ntBASIC1.9□□□□□ -2.11
NUDCD3Q8IVD9 AC096772.1-201ENST00000609146 564 ntBASIC1.9□□□□□ -2.11
NUDCD3Q8IVD9 AC023510.2-201ENST00000622162 746 ntBASIC1.9□□□□□ -2.11
NUDCD3Q8IVD9 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC1.9□□□□□ -2.11
NUDCD3Q8IVD9 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC1.9□□□□□ -2.11
NUDCD3Q8IVD9 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.9□□□□□ -2.11
NUDCD3Q8IVD9 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC1.89□□□□□ -2.11
NUDCD3Q8IVD9 RNU6-61P-201ENST00000365528 109 ntBASIC1.89□□□□□ -2.11
NUDCD3Q8IVD9 RNU6-1032P-201ENST00000384100 107 ntBASIC1.89□□□□□ -2.11
NUDCD3Q8IVD9 MIR95-201ENST00000385072 81 ntBASIC1.89□□□□□ -2.11
NUDCD3Q8IVD9 RNU2-20P-201ENST00000410425 191 ntBASIC1.89□□□□□ -2.11
NUDCD3Q8IVD9 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
NUDCD3Q8IVD9 AL135786.1-201ENST00000415892 214 ntBASIC1.89□□□□□ -2.11
NUDCD3Q8IVD9 EDDM3CP-201ENST00000415977 425 ntBASIC1.89□□□□□ -2.11
NUDCD3Q8IVD9 AC138623.1-201ENST00000418060 216 ntBASIC1.89□□□□□ -2.11
NUDCD3Q8IVD9 AC096920.1-201ENST00000423991 241 ntBASIC1.89□□□□□ -2.11
NUDCD3Q8IVD9 AC008267.5-201ENST00000424928 265 ntBASIC1.89□□□□□ -2.11
NUDCD3Q8IVD9 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC1.89□□□□□ -2.11
NUDCD3Q8IVD9 CALM1P1-201ENST00000442082 433 ntBASIC1.89□□□□□ -2.11
NUDCD3Q8IVD9 AC009238.1-201ENST00000442165 424 ntBASIC1.89□□□□□ -2.11
NUDCD3Q8IVD9 MTND6P13-201ENST00000443510 523 ntBASIC1.89□□□□□ -2.11
NUDCD3Q8IVD9 AC009237.6-201ENST00000446969 424 ntBASIC1.89□□□□□ -2.11
NUDCD3Q8IVD9 NDUFB1P2-201ENST00000449477 176 ntBASIC1.89□□□□□ -2.11
NUDCD3Q8IVD9 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC1.89□□□□□ -2.11
NUDCD3Q8IVD9 HMGB1P30-201ENST00000492455 606 ntBASIC1.89□□□□□ -2.11
NUDCD3Q8IVD9 MTCYBP35-201ENST00000503630 1137 ntBASIC1.89□□□□□ -2.11
NUDCD3Q8IVD9 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC1.89□□□□□ -2.11
NUDCD3Q8IVD9 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC1.89□□□□□ -2.11
NUDCD3Q8IVD9 SCARNA24.1-201ENST00000516465 137 ntBASIC1.89□□□□□ -2.11
NUDCD3Q8IVD9 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC1.89□□□□□ -2.11
NUDCD3Q8IVD9 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC1.89□□□□□ -2.11
NUDCD3Q8IVD9 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC1.89□□□□□ -2.11
NUDCD3Q8IVD9 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC1.89□□□□□ -2.11
NUDCD3Q8IVD9 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC1.89□□□□□ -2.11
NUDCD3Q8IVD9 MTATP6P24-201ENST00000576835 677 ntBASIC1.89□□□□□ -2.11
NUDCD3Q8IVD9 AC008521.1-201ENST00000587471 187 ntBASIC1.89□□□□□ -2.11
NUDCD3Q8IVD9 AL109918.3-201ENST00000603072 338 ntBASIC1.89□□□□□ -2.11
NUDCD3Q8IVD9 AC021646.1-201ENST00000605469 484 ntBASIC1.89□□□□□ -2.11
NUDCD3Q8IVD9 AL121992.2-201ENST00000606262 256 ntBASIC1.89□□□□□ -2.11
NUDCD3Q8IVD9 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC1.89□□□□□ -2.11
NUDCD3Q8IVD9 AL360219.1-201ENST00000610230 366 ntBASIC1.89□□□□□ -2.11
NUDCD3Q8IVD9 AC022202.1-201ENST00000613515 211 ntBASIC1.89□□□□□ -2.11
NUDCD3Q8IVD9 AC122133.1-201ENST00000613964 233 ntBASIC1.89□□□□□ -2.11
NUDCD3Q8IVD9 U6.42-201ENST00000618440 107 ntBASIC1.89□□□□□ -2.11
NUDCD3Q8IVD9 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.89□□□□□ -2.11
NUDCD3Q8IVD9 AC019226.2-201ENST00000625973 424 ntBASIC1.89□□□□□ -2.11
NUDCD3Q8IVD9 MIR3529-201ENST00000637713 78 ntBASIC1.89□□□□□ -2.11
NUDCD3Q8IVD9 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
NUDCD3Q8IVD9 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.89□□□□□ -2.11
NUDCD3Q8IVD9 RNY1P12-201ENST00000364251 105 ntBASIC1.88□□□□□ -2.11
NUDCD3Q8IVD9 RNU6-384P-201ENST00000364900 104 ntBASIC1.88□□□□□ -2.11
NUDCD3Q8IVD9 XGY1-201ENST00000381172 446 ntBASIC1.88□□□□□ -2.11
NUDCD3Q8IVD9 SNORA67.3-201ENST00000384366 140 ntBASIC1.88□□□□□ -2.11
NUDCD3Q8IVD9 RNU6-843P-201ENST00000384454 104 ntBASIC1.88□□□□□ -2.11
NUDCD3Q8IVD9 RNU1-57P-201ENST00000384491 166 ntBASIC1.88□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 82.7 ms