| RUFY3 | Q7L099 | MIR3945-201 | ENST00000581853 | 98 nt | BASIC | 1.97 | □□□□□ -2.09 | | |
| RUFY3 | Q7L099 | AC096772.1-201 | ENST00000609146 | 564 nt | BASIC | 1.97 | □□□□□ -2.09 | | |
| RUFY3 | Q7L099 | AC068944.2-201 | ENST00000610373 | 403 nt | BASIC | 1.97 | □□□□□ -2.09 | | |
| RUFY3 | Q7L099 | AC092656.1-203 | ENST00000624134 | 423 nt | BASIC | 1.97 | □□□□□ -2.09 | | |
| RUFY3 | Q7L099 | SMARCAD1-201 | ENST00000354268 | 4912 nt | APPRIS P3 TSL 1 (best) BASIC | 1.96 | □□□□□ -2.1 | | |
| RUFY3 | Q7L099 | RNU5E-1-201 | ENST00000362477 | 120 nt | BASIC | 1.96 | □□□□□ -2.1 | | |
| RUFY3 | Q7L099 | MIR95-201 | ENST00000385072 | 81 nt | BASIC | 1.96 | □□□□□ -2.1 | | |
| RUFY3 | Q7L099 | NLGN1-AS1-201 | ENST00000423873 | 815 nt | TSL 3 BASIC | 1.96 | □□□□□ -2.1 | | |
| RUFY3 | Q7L099 | SLC44A3-AS1-205 | ENST00000424505 | 612 nt | BASIC | 1.96 | □□□□□ -2.1 | | |
| RUFY3 | Q7L099 | MED28P2-201 | ENST00000475771 | 317 nt | BASIC | 1.96 | □□□□□ -2.1 | | |
| RUFY3 | Q7L099 | AC027335.1-201 | ENST00000515377 | 543 nt | TSL 4 BASIC | 1.96 | □□□□□ -2.1 | | |
| RUFY3 | Q7L099 | RNU6-311P-201 | ENST00000516224 | 102 nt | BASIC | 1.96 | □□□□□ -2.1 | | |
| RUFY3 | Q7L099 | AC011979.2-201 | ENST00000527568 | 352 nt | BASIC | 1.96 | □□□□□ -2.1 | | |
| RUFY3 | Q7L099 | AL035078.1-202 | ENST00000531627 | 413 nt | TSL 2 BASIC | 1.96 | □□□□□ -2.1 | | |
| RUFY3 | Q7L099 | AC090049.1-201 | ENST00000551075 | 1011 nt | TSL 3 BASIC | 1.96 | □□□□□ -2.1 | | |
| RUFY3 | Q7L099 | AC174048.1-201 | ENST00000603389 | 144 nt | BASIC | 1.96 | □□□□□ -2.1 | | |
| RUFY3 | Q7L099 | AC018714.1-201 | ENST00000605028 | 208 nt | BASIC | 1.96 | □□□□□ -2.1 | | |
| RUFY3 | Q7L099 | AC126118.1-201 | ENST00000607744 | 628 nt | BASIC | 1.96 | □□□□□ -2.1 | | |
| RUFY3 | Q7L099 | MYCBP2-AS1-209 | ENST00000631152 | 412 nt | TSL 5 BASIC | 1.96 | □□□□□ -2.1 | | |
| RUFY3 | Q7L099 | RGS13-201 | ENST00000391995 | 1505 nt | APPRIS P1 TSL 1 (best) BASIC | 1.96 | □□□□□ -2.1 | | |
| RUFY3 | Q7L099 | CFHR4-202 | ENST00000367416 | 2178 nt | APPRIS P1 TSL 2 BASIC | 1.95 | □□□□□ -2.1 | | |
| RUFY3 | Q7L099 | AL391994.1-201 | ENST00000254724 | 282 nt | BASIC | 1.95 | □□□□□ -2.1 | | |
| RUFY3 | Q7L099 | AC104462.1-201 | ENST00000414565 | 447 nt | TSL 2 BASIC | 1.95 | □□□□□ -2.1 | | |
| RUFY3 | Q7L099 | VN1R36P-201 | ENST00000414936 | 291 nt | BASIC | 1.95 | □□□□□ -2.1 | | |
| RUFY3 | Q7L099 | LINC01780-201 | ENST00000420059 | 442 nt | TSL 2 BASIC | 1.95 | □□□□□ -2.1 | | |
| RUFY3 | Q7L099 | AC008267.5-201 | ENST00000424928 | 265 nt | BASIC | 1.95 | □□□□□ -2.1 | | |
| RUFY3 | Q7L099 | HSFY7P-201 | ENST00000432672 | 318 nt | BASIC | 1.95 | □□□□□ -2.1 | | |
| RUFY3 | Q7L099 | HMGN2P3-201 | ENST00000433603 | 273 nt | BASIC | 1.95 | □□□□□ -2.1 | | |
| RUFY3 | Q7L099 | HMGN2P5-201 | ENST00000436882 | 273 nt | BASIC | 1.95 | □□□□□ -2.1 | | |
| RUFY3 | Q7L099 | HSFY8P-201 | ENST00000437934 | 318 nt | BASIC | 1.95 | □□□□□ -2.1 | | |
| RUFY3 | Q7L099 | HSPE1P21-201 | ENST00000438283 | 308 nt | BASIC | 1.95 | □□□□□ -2.1 | | |
| RUFY3 | Q7L099 | AC003071.1-201 | ENST00000451219 | 789 nt | BASIC | 1.95 | □□□□□ -2.1 | | |
| RUFY3 | Q7L099 | HSFY5P-201 | ENST00000453726 | 309 nt | BASIC | 1.95 | □□□□□ -2.1 | | |
| RUFY3 | Q7L099 | AC018868.1-201 | ENST00000491307 | 315 nt | BASIC | 1.95 | □□□□□ -2.1 | | |
| RUFY3 | Q7L099 | AC034244.1-201 | ENST00000507687 | 207 nt | BASIC | 1.95 | □□□□□ -2.1 | | |
| RUFY3 | Q7L099 | CBX3P4-201 | ENST00000538909 | 354 nt | BASIC | 1.95 | □□□□□ -2.1 | | |
| RUFY3 | Q7L099 | LINC02384-208 | ENST00000546086 | 565 nt | TSL 3 BASIC | 1.95 | □□□□□ -2.1 | | |
| RUFY3 | Q7L099 | AC136619.2-201 | ENST00000563361 | 631 nt | BASIC | 1.95 | □□□□□ -2.1 | | |
| RUFY3 | Q7L099 | MTCYBP33-201 | ENST00000575007 | 1130 nt | BASIC | 1.95 | □□□□□ -2.1 | | |
| RUFY3 | Q7L099 | MIR3122-201 | ENST00000577243 | 73 nt | BASIC | 1.95 | □□□□□ -2.1 | | |
| RUFY3 | Q7L099 | PTP4A1-204 | ENST00000578299 | 135 nt | TSL 2 BASIC | 1.95 | □□□□□ -2.1 | | |
| RUFY3 | Q7L099 | AC015813.2-201 | ENST00000578794 | 711 nt | APPRIS P1 TSL 3 BASIC | 1.95 | □□□□□ -2.1 | | |
| RUFY3 | Q7L099 | BNIP3P30-201 | ENST00000601184 | 574 nt | BASIC | 1.95 | □□□□□ -2.1 | | |
| RUFY3 | Q7L099 | AC073410.2-201 | ENST00000603240 | 332 nt | BASIC | 1.95 | □□□□□ -2.1 | | |
| RUFY3 | Q7L099 | AP000811.1-201 | ENST00000603803 | 651 nt | BASIC | 1.95 | □□□□□ -2.1 | | |
| RUFY3 | Q7L099 | AC005696.2-201 | ENST00000610120 | 626 nt | TSL 3 BASIC | 1.95 | □□□□□ -2.1 | | |
| RUFY3 | Q7L099 | TUSC7.1-201 | ENST00000610969 | 165 nt | BASIC | 1.95 | □□□□□ -2.1 | | |
| RUFY3 | Q7L099 | AP002782.1-201 | ENST00000623107 | 614 nt | BASIC | 1.95 | □□□□□ -2.1 | | |
| RUFY3 | Q7L099 | AC092192.1-201 | ENST00000633154 | 1018 nt | BASIC | 1.95 | □□□□□ -2.1 | | |
| RUFY3 | Q7L099 | TFEC-204 | ENST00000457268 | 6309 nt | TSL 3 BASIC | 1.94 | □□□□□ -2.1 | | |
| RUFY3 | Q7L099 | SNORD3E-201 | ENST00000362899 | 217 nt | BASIC | 1.94 | □□□□□ -2.1 | | |
| RUFY3 | Q7L099 | SNORD115-3-201 | ENST00000363100 | 82 nt | BASIC | 1.94 | □□□□□ -2.1 | | |
| RUFY3 | Q7L099 | RNU6-533P-201 | ENST00000384144 | 107 nt | BASIC | 1.94 | □□□□□ -2.1 | | |
| RUFY3 | Q7L099 | RNU1-57P-201 | ENST00000384491 | 166 nt | BASIC | 1.94 | □□□□□ -2.1 | | |
| RUFY3 | Q7L099 | AL365338.1-201 | ENST00000422282 | 858 nt | BASIC | 1.94 | □□□□□ -2.1 | | |
| RUFY3 | Q7L099 | AL137159.1-201 | ENST00000452808 | 512 nt | BASIC | 1.94 | □□□□□ -2.1 | | |
| RUFY3 | Q7L099 | OCIAD1-AS1-201 | ENST00000513576 | 265 nt | TSL 3 BASIC | 1.94 | □□□□□ -2.1 | | |
| RUFY3 | Q7L099 | AC108727.1-201 | ENST00000513802 | 393 nt | TSL 2 BASIC | 1.94 | □□□□□ -2.1 | | |
| RUFY3 | Q7L099 | RNU7-51P-201 | ENST00000516560 | 62 nt | BASIC | 1.94 | □□□□□ -2.1 | | |
| RUFY3 | Q7L099 | AP002428.1-201 | ENST00000527345 | 380 nt | TSL 3 BASIC | 1.94 | □□□□□ -2.1 | | |
| RUFY3 | Q7L099 | AP003122.4-201 | ENST00000530980 | 758 nt | BASIC | 1.94 | □□□□□ -2.1 | | |
| RUFY3 | Q7L099 | AL136038.2-201 | ENST00000553983 | 283 nt | TSL 3 BASIC | 1.94 | □□□□□ -2.1 | | |
| RUFY3 | Q7L099 | AC093249.1-201 | ENST00000567049 | 203 nt | BASIC | 1.94 | □□□□□ -2.1 | | |
| RUFY3 | Q7L099 | AC008741.1-201 | ENST00000569456 | 510 nt | TSL 3 BASIC | 1.94 | □□□□□ -2.1 | | |
| RUFY3 | Q7L099 | AL354943.1-201 | ENST00000572103 | 781 nt | BASIC | 1.94 | □□□□□ -2.1 | | |
| RUFY3 | Q7L099 | AC090897.2-201 | ENST00000581715 | 130 nt | BASIC | 1.94 | □□□□□ -2.1 | | |
| RUFY3 | Q7L099 | AC245748.3-201 | ENST00000588710 | 241 nt | TSL 3 BASIC | 1.94 | □□□□□ -2.1 | | |
| RUFY3 | Q7L099 | BNIP3P25-201 | ENST00000596023 | 559 nt | BASIC | 1.94 | □□□□□ -2.1 | | |
| RUFY3 | Q7L099 | DEFB131E-202 | ENST00000602581 | 683 nt | BASIC | 1.94 | □□□□□ -2.1 | | |
| RUFY3 | Q7L099 | AL078605.1-201 | ENST00000603529 | 500 nt | BASIC | 1.94 | □□□□□ -2.1 | | |
| RUFY3 | Q7L099 | SEPT7P9-203 | ENST00000604116 | 343 nt | BASIC | 1.94 | □□□□□ -2.1 | | |
| RUFY3 | Q7L099 | AC105129.3-201 | ENST00000605455 | 485 nt | BASIC | 1.94 | □□□□□ -2.1 | | |
| RUFY3 | Q7L099 | AC008781.3-201 | ENST00000622826 | 335 nt | TSL 2 BASIC | 1.94 | □□□□□ -2.1 | | |
| RUFY3 | Q7L099 | MT-CYB-201 | ENST00000361789 | 1141 nt | APPRIS P1 BASIC | 1.93 | □□□□□ -2.1 | | |
| RUFY3 | Q7L099 | SNORA8-201 | ENST00000384574 | 139 nt | BASIC | 1.93 | □□□□□ -2.1 | | |
| RUFY3 | Q7L099 | AL627390.1-201 | ENST00000396055 | 340 nt | BASIC | 1.93 | □□□□□ -2.1 | | |
| RUFY3 | Q7L099 | Y_RNA.623-201 | ENST00000411128 | 95 nt | BASIC | 1.93 | □□□□□ -2.1 | | |
| RUFY3 | Q7L099 | POLHP1-201 | ENST00000411806 | 470 nt | BASIC | 1.93 | □□□□□ -2.1 | | |
| RUFY3 | Q7L099 | AP000473.1-201 | ENST00000413645 | 550 nt | TSL 3 BASIC | 1.93 | □□□□□ -2.1 | | |
| RUFY3 | Q7L099 | UBE2V1P10-201 | ENST00000414685 | 269 nt | BASIC | 1.93 | □□□□□ -2.1 | | |
| RUFY3 | Q7L099 | PCDH9-AS3-201 | ENST00000434073 | 479 nt | TSL 2 BASIC | 1.93 | □□□□□ -2.1 | | |
| RUFY3 | Q7L099 | AL606517.1-201 | ENST00000446914 | 387 nt | BASIC | 1.93 | □□□□□ -2.1 | | |
| RUFY3 | Q7L099 | AL136380.1-201 | ENST00000447970 | 162 nt | BASIC | 1.93 | □□□□□ -2.1 | | |
| RUFY3 | Q7L099 | KATNBL1P6-201 | ENST00000453433 | 915 nt | BASIC | 1.93 | □□□□□ -2.1 | | |
| RUFY3 | Q7L099 | LINC02540-201 | ENST00000455554 | 570 nt | TSL 3 BASIC | 1.93 | □□□□□ -2.1 | | |
| RUFY3 | Q7L099 | AL356270.1-201 | ENST00000456587 | 522 nt | TSL 3 BASIC | 1.93 | □□□□□ -2.1 | | |
| RUFY3 | Q7L099 | snoU13.15-201 | ENST00000459407 | 104 nt | BASIC | 1.93 | □□□□□ -2.1 | | |
| RUFY3 | Q7L099 | RNA5SP57-201 | ENST00000459463 | 123 nt | BASIC | 1.93 | □□□□□ -2.1 | | |
| RUFY3 | Q7L099 | AP002075.1-201 | ENST00000505091 | 603 nt | TSL 3 BASIC | 1.93 | □□□□□ -2.1 | | |
| RUFY3 | Q7L099 | RNU2-53P-201 | ENST00000516257 | 147 nt | BASIC | 1.93 | □□□□□ -2.1 | | |
| RUFY3 | Q7L099 | RNU6-295P-201 | ENST00000516901 | 104 nt | BASIC | 1.93 | □□□□□ -2.1 | | |
| RUFY3 | Q7L099 | RNA5SP337-201 | ENST00000517007 | 109 nt | BASIC | 1.93 | □□□□□ -2.1 | | |
| RUFY3 | Q7L099 | RNU6-586P-201 | ENST00000517265 | 104 nt | BASIC | 1.93 | □□□□□ -2.1 | | |
| RUFY3 | Q7L099 | TMCO5B-203 | ENST00000529623 | 509 nt | TSL 4 BASIC | 1.93 | □□□□□ -2.1 | | |
| RUFY3 | Q7L099 | AC092490.2-202 | ENST00000544922 | 462 nt | TSL 3 BASIC | 1.93 | □□□□□ -2.1 | | |
| RUFY3 | Q7L099 | HSBP1P1-201 | ENST00000555205 | 166 nt | BASIC | 1.93 | □□□□□ -2.1 | | |
| RUFY3 | Q7L099 | LINC01195-201 | ENST00000570118 | 451 nt | TSL 3 BASIC | 1.93 | □□□□□ -2.1 | | |
| RUFY3 | Q7L099 | ELOCP5-201 | ENST00000604924 | 333 nt | BASIC | 1.93 | □□□□□ -2.1 | | |
| RUFY3 | Q7L099 | AC090517.3-201 | ENST00000625170 | 141 nt | BASIC | 1.93 | □□□□□ -2.1 | | |
| RUFY3 | Q7L099 | FSD1L-201 | ENST00000374707 | 7062 nt | TSL 1 (best) BASIC | 1.93 | □□□□□ -2.1 | | |