Protein–RNA interactions for Protein: Q5M7Z0

RNFT1, E3 ubiquitin-protein ligase RNFT1, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT1Q5M7Z0 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC4.43□□□□□ -1.7
RNFT1Q5M7Z0 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
RNFT1Q5M7Z0 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC4.43□□□□□ -1.7
RNFT1Q5M7Z0 AC126755.2-208ENST00000327792 462 ntBASIC4.43□□□□□ -1.7
RNFT1Q5M7Z0 AC138969.1-213ENST00000331436 462 ntBASIC4.43□□□□□ -1.7
RNFT1Q5M7Z0 FHIT-201ENST00000341848 174 ntTSL 3 BASIC4.43□□□□□ -1.7
RNFT1Q5M7Z0 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
RNFT1Q5M7Z0 U3.30-201ENST00000391308 210 ntBASIC4.43□□□□□ -1.7
RNFT1Q5M7Z0 RPL21P17-201ENST00000397467 475 ntBASIC4.43□□□□□ -1.7
RNFT1Q5M7Z0 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC4.43□□□□□ -1.7
RNFT1Q5M7Z0 RNA5SP31-201ENST00000411144 127 ntBASIC4.43□□□□□ -1.7
RNFT1Q5M7Z0 EDDM3CP-201ENST00000415977 425 ntBASIC4.43□□□□□ -1.7
RNFT1Q5M7Z0 AC074117.2-201ENST00000417130 397 ntBASIC4.43□□□□□ -1.7
RNFT1Q5M7Z0 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC4.43□□□□□ -1.7
RNFT1Q5M7Z0 AL359073.1-201ENST00000448036 403 ntBASIC4.43□□□□□ -1.7
RNFT1Q5M7Z0 AC000111.2-201ENST00000448200 210 ntBASIC4.43□□□□□ -1.7
RNFT1Q5M7Z0 RN7SL354P-201ENST00000469282 294 ntBASIC4.43□□□□□ -1.7
RNFT1Q5M7Z0 RPS26P45-201ENST00000471748 340 ntBASIC4.43□□□□□ -1.7
RNFT1Q5M7Z0 AC091179.3-201ENST00000474761 144 ntBASIC4.43□□□□□ -1.7
RNFT1Q5M7Z0 AC016632.1-201ENST00000503994 196 ntBASIC4.43□□□□□ -1.7
RNFT1Q5M7Z0 RNU6-65P-201ENST00000516332 98 ntBASIC4.43□□□□□ -1.7
RNFT1Q5M7Z0 IGKV1-32-201ENST00000519290 311 ntBASIC4.43□□□□□ -1.7
RNFT1Q5M7Z0 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC4.43□□□□□ -1.7
RNFT1Q5M7Z0 AC019206.1-201ENST00000621938 425 ntBASIC4.43□□□□□ -1.7
RNFT1Q5M7Z0 AC063976.2-201ENST00000425667 3556 ntBASIC4.43□□□□□ -1.7
RNFT1Q5M7Z0 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
RNFT1Q5M7Z0 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
RNFT1Q5M7Z0 Z82209.1-201ENST00000422141 2135 ntBASIC4.43□□□□□ -1.7
RNFT1Q5M7Z0 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
RNFT1Q5M7Z0 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC4.42□□□□□ -1.7
RNFT1Q5M7Z0 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
RNFT1Q5M7Z0 U8.1-201ENST00000362843 134 ntBASIC4.42□□□□□ -1.7
RNFT1Q5M7Z0 Y_RNA.281-201ENST00000364774 94 ntBASIC4.42□□□□□ -1.7
RNFT1Q5M7Z0 Y_RNA.368-201ENST00000365547 113 ntBASIC4.42□□□□□ -1.7
RNFT1Q5M7Z0 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
RNFT1Q5M7Z0 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC4.42□□□□□ -1.7
RNFT1Q5M7Z0 RNU6-837P-201ENST00000391056 108 ntBASIC4.42□□□□□ -1.7
RNFT1Q5M7Z0 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC4.42□□□□□ -1.7
RNFT1Q5M7Z0 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC4.42□□□□□ -1.7
RNFT1Q5M7Z0 HSPE1P21-201ENST00000438283 308 ntBASIC4.42□□□□□ -1.7
RNFT1Q5M7Z0 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC4.42□□□□□ -1.7
RNFT1Q5M7Z0 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC4.42□□□□□ -1.7
RNFT1Q5M7Z0 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC4.42□□□□□ -1.7
RNFT1Q5M7Z0 UBE2CP3-201ENST00000502715 450 ntBASIC4.42□□□□□ -1.7
RNFT1Q5M7Z0 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC4.42□□□□□ -1.7
RNFT1Q5M7Z0 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
RNFT1Q5M7Z0 MIR4458-201ENST00000578872 75 ntBASIC4.42□□□□□ -1.7
RNFT1Q5M7Z0 MIR4724-201ENST00000579485 89 ntBASIC4.42□□□□□ -1.7
RNFT1Q5M7Z0 MIR6853-201ENST00000619642 74 ntBASIC4.42□□□□□ -1.7
RNFT1Q5M7Z0 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC4.42□□□□□ -1.7
RNFT1Q5M7Z0 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC4.42□□□□□ -1.7
RNFT1Q5M7Z0 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
RNFT1Q5M7Z0 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
RNFT1Q5M7Z0 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
RNFT1Q5M7Z0 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
RNFT1Q5M7Z0 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC4.42□□□□□ -1.7
RNFT1Q5M7Z0 AC073073.2-201ENST00000609827 2578 ntBASIC4.42□□□□□ -1.7
RNFT1Q5M7Z0 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
RNFT1Q5M7Z0 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC4.41□□□□□ -1.7
RNFT1Q5M7Z0 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC4.41□□□□□ -1.7
RNFT1Q5M7Z0 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
RNFT1Q5M7Z0 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
RNFT1Q5M7Z0 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
RNFT1Q5M7Z0 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
RNFT1Q5M7Z0 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC4.41□□□□□ -1.7
RNFT1Q5M7Z0 AL590240.1-201ENST00000334118 313 ntBASIC4.41□□□□□ -1.7
RNFT1Q5M7Z0 RNA5SP332-201ENST00000391063 115 ntBASIC4.41□□□□□ -1.7
RNFT1Q5M7Z0 AL512604.1-201ENST00000404812 257 ntBASIC4.41□□□□□ -1.7
RNFT1Q5M7Z0 U6atac.2-201ENST00000408644 118 ntBASIC4.41□□□□□ -1.7
RNFT1Q5M7Z0 RN7SKP16-201ENST00000410180 299 ntBASIC4.41□□□□□ -1.7
RNFT1Q5M7Z0 BX510359.2-201ENST00000417920 305 ntBASIC4.41□□□□□ -1.7
RNFT1Q5M7Z0 MLLT10P1-201ENST00000418346 262 ntBASIC4.41□□□□□ -1.7
RNFT1Q5M7Z0 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC4.41□□□□□ -1.7
RNFT1Q5M7Z0 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
RNFT1Q5M7Z0 SCARNA22-201ENST00000503991 125 ntBASIC4.41□□□□□ -1.7
RNFT1Q5M7Z0 RN7SKP19-201ENST00000516016 252 ntBASIC4.41□□□□□ -1.7
RNFT1Q5M7Z0 SCARNA15.2-201ENST00000516409 127 ntBASIC4.41□□□□□ -1.7
RNFT1Q5M7Z0 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
RNFT1Q5M7Z0 AC018630.3-201ENST00000542637 96 ntBASIC4.41□□□□□ -1.7
RNFT1Q5M7Z0 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC4.41□□□□□ -1.7
RNFT1Q5M7Z0 AC233702.9-201ENST00000581528 203 ntBASIC4.41□□□□□ -1.7
RNFT1Q5M7Z0 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC4.41□□□□□ -1.7
RNFT1Q5M7Z0 AC015813.4-201ENST00000610469 179 ntBASIC4.41□□□□□ -1.7
RNFT1Q5M7Z0 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC4.41□□□□□ -1.7
RNFT1Q5M7Z0 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC4.41□□□□□ -1.7
RNFT1Q5M7Z0 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
RNFT1Q5M7Z0 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.41□□□□□ -1.7
RNFT1Q5M7Z0 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC4.41□□□□□ -1.7
RNFT1Q5M7Z0 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
RNFT1Q5M7Z0 OFD1P6Y-202ENST00000451061 2724 ntBASIC4.41□□□□□ -1.7
RNFT1Q5M7Z0 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
RNFT1Q5M7Z0 NEAT1-202ENST00000501122 22743 ntBASIC4.41□□□□□ -1.7
RNFT1Q5M7Z0 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
RNFT1Q5M7Z0 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC4.4□□□□□ -1.7
RNFT1Q5M7Z0 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC4.4□□□□□ -1.7
RNFT1Q5M7Z0 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.7
RNFT1Q5M7Z0 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
RNFT1Q5M7Z0 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
RNFT1Q5M7Z0 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
RNFT1Q5M7Z0 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC4.4□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 112.5 ms