Protein–RNA interactions for Protein: Q53GD3

SLC44A4, Choline transporter-like protein 4, humanhuman

Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A4Q53GD3 LRRC37A5P-203ENST00000580181 585 ntBASIC3.55□□□□□ -1.84
SLC44A4Q53GD3 AC107294.3-201ENST00000609211 526 ntBASIC3.55□□□□□ -1.84
SLC44A4Q53GD3 RNU6ATAC35P-201ENST00000609276 444 ntBASIC3.55□□□□□ -1.84
SLC44A4Q53GD3 AC002076.2-201ENST00000617362 122 ntBASIC3.55□□□□□ -1.84
SLC44A4Q53GD3 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.55□□□□□ -1.84
SLC44A4Q53GD3 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC3.55□□□□□ -1.84
SLC44A4Q53GD3 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.55□□□□□ -1.84
SLC44A4Q53GD3 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
SLC44A4Q53GD3 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.54□□□□□ -1.84
SLC44A4Q53GD3 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC3.54□□□□□ -1.84
SLC44A4Q53GD3 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
SLC44A4Q53GD3 Y_RNA.187-201ENST00000363918 113 ntBASIC3.54□□□□□ -1.84
SLC44A4Q53GD3 RNU6-283P-201ENST00000364788 107 ntBASIC3.54□□□□□ -1.84
SLC44A4Q53GD3 Y_RNA.395-201ENST00000383945 109 ntBASIC3.54□□□□□ -1.84
SLC44A4Q53GD3 Y_RNA.459-201ENST00000384251 102 ntBASIC3.54□□□□□ -1.84
SLC44A4Q53GD3 SNORA48.8-201ENST00000391324 134 ntBASIC3.54□□□□□ -1.84
SLC44A4Q53GD3 RNU6-607P-201ENST00000411283 108 ntBASIC3.54□□□□□ -1.84
SLC44A4Q53GD3 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC3.54□□□□□ -1.84
SLC44A4Q53GD3 AC113618.1-201ENST00000416747 285 ntBASIC3.54□□□□□ -1.84
SLC44A4Q53GD3 PMCHL1-202ENST00000423102 261 ntBASIC3.54□□□□□ -1.84
SLC44A4Q53GD3 FABP5P14-201ENST00000437273 393 ntBASIC3.54□□□□□ -1.84
SLC44A4Q53GD3 MTND3P2-201ENST00000438452 342 ntBASIC3.54□□□□□ -1.84
SLC44A4Q53GD3 Z75741.1-201ENST00000446793 314 ntBASIC3.54□□□□□ -1.84
SLC44A4Q53GD3 AC104472.2-201ENST00000469035 601 ntBASIC3.54□□□□□ -1.84
SLC44A4Q53GD3 RPS29P20-201ENST00000489592 171 ntBASIC3.54□□□□□ -1.84
SLC44A4Q53GD3 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC3.54□□□□□ -1.84
SLC44A4Q53GD3 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC3.54□□□□□ -1.84
SLC44A4Q53GD3 RNU6-1069P-201ENST00000516612 133 ntBASIC3.54□□□□□ -1.84
SLC44A4Q53GD3 RNU6-579P-201ENST00000516879 102 ntBASIC3.54□□□□□ -1.84
SLC44A4Q53GD3 RN7SKP209-201ENST00000516888 304 ntBASIC3.54□□□□□ -1.84
SLC44A4Q53GD3 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC3.54□□□□□ -1.84
SLC44A4Q53GD3 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC3.54□□□□□ -1.84
SLC44A4Q53GD3 AMZ2P1-203ENST00000565833 850 ntBASIC3.54□□□□□ -1.84
SLC44A4Q53GD3 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC3.54□□□□□ -1.84
SLC44A4Q53GD3 uc_338.22-201ENST00000622722 187 ntBASIC3.54□□□□□ -1.84
SLC44A4Q53GD3 AC006386.2-201ENST00000624491 75 ntBASIC3.54□□□□□ -1.84
SLC44A4Q53GD3 AC012005.1-201ENST00000624575 75 ntBASIC3.54□□□□□ -1.84
SLC44A4Q53GD3 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.54□□□□□ -1.84
SLC44A4Q53GD3 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
SLC44A4Q53GD3 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.54□□□□□ -1.84
SLC44A4Q53GD3 AC093908.1-201ENST00000623125 8092 ntBASIC3.54□□□□□ -1.84
SLC44A4Q53GD3 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
SLC44A4Q53GD3 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.53□□□□□ -1.84
SLC44A4Q53GD3 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
SLC44A4Q53GD3 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
SLC44A4Q53GD3 Y_RNA.145-201ENST00000363527 102 ntBASIC3.53□□□□□ -1.84
SLC44A4Q53GD3 RNU6-884P-201ENST00000363889 107 ntBASIC3.53□□□□□ -1.84
SLC44A4Q53GD3 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
SLC44A4Q53GD3 RNU6-1035P-201ENST00000384477 107 ntBASIC3.53□□□□□ -1.84
SLC44A4Q53GD3 SNORA40C-201ENST00000391285 128 ntBASIC3.53□□□□□ -1.84
SLC44A4Q53GD3 MIR450B-201ENST00000401182 78 ntBASIC3.53□□□□□ -1.84
SLC44A4Q53GD3 RNA5SP293-201ENST00000410527 113 ntBASIC3.53□□□□□ -1.84
SLC44A4Q53GD3 PGBD4P6-201ENST00000421501 610 ntBASIC3.53□□□□□ -1.84
SLC44A4Q53GD3 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC3.53□□□□□ -1.84
SLC44A4Q53GD3 SKA2P1-201ENST00000425592 390 ntBASIC3.53□□□□□ -1.84
SLC44A4Q53GD3 SETP5-201ENST00000437270 562 ntBASIC3.53□□□□□ -1.84
SLC44A4Q53GD3 AC125238.1-201ENST00000448842 249 ntBASIC3.53□□□□□ -1.84
SLC44A4Q53GD3 MTCO3P10-201ENST00000455912 772 ntBASIC3.53□□□□□ -1.84
SLC44A4Q53GD3 RPL30P15-201ENST00000457129 321 ntBASIC3.53□□□□□ -1.84
SLC44A4Q53GD3 AC010401.1-201ENST00000463867 348 ntBASIC3.53□□□□□ -1.84
SLC44A4Q53GD3 RPL27AP5-201ENST00000469428 449 ntBASIC3.53□□□□□ -1.84
SLC44A4Q53GD3 RPL30P14-201ENST00000482744 348 ntBASIC3.53□□□□□ -1.84
SLC44A4Q53GD3 AC011005.2-201ENST00000487324 359 ntBASIC3.53□□□□□ -1.84
SLC44A4Q53GD3 RPL39P5-202ENST00000512505 151 ntBASIC3.53□□□□□ -1.84
SLC44A4Q53GD3 RNA5SP380-201ENST00000517190 98 ntBASIC3.53□□□□□ -1.84
SLC44A4Q53GD3 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC3.53□□□□□ -1.84
SLC44A4Q53GD3 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC3.53□□□□□ -1.84
SLC44A4Q53GD3 RNU6-323P-201ENST00000521915 107 ntBASIC3.53□□□□□ -1.84
SLC44A4Q53GD3 APAF1-207ENST00000547743 651 ntTSL 3 BASIC3.53□□□□□ -1.84
SLC44A4Q53GD3 AC138761.3-201ENST00000579993 334 ntBASIC3.53□□□□□ -1.84
SLC44A4Q53GD3 MIR4276-201ENST00000584832 70 ntBASIC3.53□□□□□ -1.84
SLC44A4Q53GD3 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.53□□□□□ -1.84
SLC44A4Q53GD3 KLKP1-201ENST00000595979 403 ntBASIC3.53□□□□□ -1.84
SLC44A4Q53GD3 AC136443.5-201ENST00000603741 370 ntBASIC3.53□□□□□ -1.84
SLC44A4Q53GD3 MTND4LP5-201ENST00000605152 292 ntBASIC3.53□□□□□ -1.84
SLC44A4Q53GD3 AC068831.7-201ENST00000616954 363 ntBASIC3.53□□□□□ -1.84
SLC44A4Q53GD3 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.53□□□□□ -1.84
SLC44A4Q53GD3 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
SLC44A4Q53GD3 U6.99-201ENST00000637524 83 ntBASIC3.53□□□□□ -1.84
SLC44A4Q53GD3 AL732372.2-225ENST00000642124 456 ntBASIC3.53□□□□□ -1.84
SLC44A4Q53GD3 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC3.53□□□□□ -1.84
SLC44A4Q53GD3 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
SLC44A4Q53GD3 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC3.53□□□□□ -1.84
SLC44A4Q53GD3 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.53□□□□□ -1.84
SLC44A4Q53GD3 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.85
SLC44A4Q53GD3 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
SLC44A4Q53GD3 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.52□□□□□ -1.85
SLC44A4Q53GD3 RNU6-1188P-201ENST00000363795 107 ntBASIC3.52□□□□□ -1.85
SLC44A4Q53GD3 Y_RNA.212-201ENST00000364177 102 ntBASIC3.52□□□□□ -1.85
SLC44A4Q53GD3 SNORD14B-201ENST00000364533 90 ntBASIC3.52□□□□□ -1.85
SLC44A4Q53GD3 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
SLC44A4Q53GD3 SNORD116-11-201ENST00000383882 92 ntBASIC3.52□□□□□ -1.85
SLC44A4Q53GD3 RNU6-166P-201ENST00000384371 107 ntBASIC3.52□□□□□ -1.85
SLC44A4Q53GD3 RNU6-658P-201ENST00000384606 106 ntBASIC3.52□□□□□ -1.85
SLC44A4Q53GD3 Y_RNA.623-201ENST00000411128 95 ntBASIC3.52□□□□□ -1.85
SLC44A4Q53GD3 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC3.52□□□□□ -1.85
SLC44A4Q53GD3 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC3.52□□□□□ -1.85
SLC44A4Q53GD3 HMGB1P9-201ENST00000429856 646 ntBASIC3.52□□□□□ -1.85
SLC44A4Q53GD3 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC3.52□□□□□ -1.85
SLC44A4Q53GD3 AL590664.1-201ENST00000448065 339 ntBASIC3.52□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 111.4 ms