Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC0.54□□□□□ -2.32
CCDC58Q4VC31 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC0.54□□□□□ -2.32
CCDC58Q4VC31 AC118282.2-201ENST00000508739 374 ntBASIC0.54□□□□□ -2.32
CCDC58Q4VC31 AC008837.2-201ENST00000513076 418 ntBASIC0.54□□□□□ -2.32
CCDC58Q4VC31 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC0.54□□□□□ -2.32
CCDC58Q4VC31 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC0.54□□□□□ -2.32
CCDC58Q4VC31 snoU13.31-201ENST00000607291 104 ntBASIC0.54□□□□□ -2.32
CCDC58Q4VC31 AL365204.3-201ENST00000612448 685 ntBASIC0.54□□□□□ -2.32
CCDC58Q4VC31 AC040896.1-201ENST00000613819 479 ntBASIC0.54□□□□□ -2.32
CCDC58Q4VC31 5S_rRNA.11-201ENST00000618635 84 ntBASIC0.54□□□□□ -2.32
CCDC58Q4VC31 AL161781.1-201ENST00000354277 403 ntBASIC0.53□□□□□ -2.32
CCDC58Q4VC31 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC0.53□□□□□ -2.32
CCDC58Q4VC31 RNA5SP99-201ENST00000364020 114 ntBASIC0.53□□□□□ -2.32
CCDC58Q4VC31 MIR92A1-201ENST00000385233 78 ntBASIC0.53□□□□□ -2.32
CCDC58Q4VC31 HMGN1P14-201ENST00000412459 517 ntBASIC0.53□□□□□ -2.32
CCDC58Q4VC31 ZNF965P-201ENST00000432501 817 ntBASIC0.53□□□□□ -2.32
CCDC58Q4VC31 OFD1P3Y-201ENST00000453312 783 ntBASIC0.53□□□□□ -2.32
CCDC58Q4VC31 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC0.53□□□□□ -2.32
CCDC58Q4VC31 TRBVA-201ENST00000498804 316 ntBASIC0.53□□□□□ -2.32
CCDC58Q4VC31 MTCYBP40-201ENST00000509390 1135 ntBASIC0.53□□□□□ -2.32
CCDC58Q4VC31 AC093259.1-201ENST00000509755 300 ntBASIC0.53□□□□□ -2.32
CCDC58Q4VC31 RNU6-1092P-201ENST00000516955 87 ntBASIC0.53□□□□□ -2.32
CCDC58Q4VC31 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC0.53□□□□□ -2.32
CCDC58Q4VC31 BNIP3P16-201ENST00000589779 534 ntBASIC0.53□□□□□ -2.32
CCDC58Q4VC31 AC008751.2-201ENST00000597885 980 ntBASIC0.53□□□□□ -2.32
CCDC58Q4VC31 AC106730.3-201ENST00000624568 641 ntBASIC0.53□□□□□ -2.32
CCDC58Q4VC31 AL133216.2-202ENST00000634512 349 ntBASIC0.53□□□□□ -2.32
CCDC58Q4VC31 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.53□□□□□ -2.33
CCDC58Q4VC31 FARSBP1-201ENST00000435808 1778 ntBASIC0.52□□□□□ -2.33
CCDC58Q4VC31 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC0.52□□□□□ -2.33
CCDC58Q4VC31 SNX2P2-201ENST00000424553 323 ntBASIC0.52□□□□□ -2.33
CCDC58Q4VC31 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC0.52□□□□□ -2.33
CCDC58Q4VC31 Z82205.1-201ENST00000428456 297 ntBASIC0.52□□□□□ -2.33
CCDC58Q4VC31 AL669831.1-202ENST00000428504 417 ntBASIC0.52□□□□□ -2.33
CCDC58Q4VC31 C8orf59P1-201ENST00000429930 303 ntBASIC0.52□□□□□ -2.33
CCDC58Q4VC31 USP9YP22-201ENST00000438971 294 ntBASIC0.52□□□□□ -2.33
CCDC58Q4VC31 AC244505.5-201ENST00000443639 207 ntBASIC0.52□□□□□ -2.33
CCDC58Q4VC31 AL157398.1-201ENST00000452981 186 ntBASIC0.52□□□□□ -2.33
CCDC58Q4VC31 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC0.52□□□□□ -2.33
CCDC58Q4VC31 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC0.52□□□□□ -2.33
CCDC58Q4VC31 RN7SKP265-201ENST00000516448 223 ntBASIC0.52□□□□□ -2.33
CCDC58Q4VC31 AC018630.3-201ENST00000542637 96 ntBASIC0.52□□□□□ -2.33
CCDC58Q4VC31 AC233266.2-201ENST00000567067 528 ntBASIC0.52□□□□□ -2.33
CCDC58Q4VC31 AC009269.6-201ENST00000621778 588 ntBASIC0.52□□□□□ -2.33
CCDC58Q4VC31 AC130454.1-201ENST00000622948 401 ntBASIC0.52□□□□□ -2.33
CCDC58Q4VC31 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC0.52□□□□□ -2.33
CCDC58Q4VC31 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.51□□□□□ -2.33
CCDC58Q4VC31 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.51□□□□□ -2.33
CCDC58Q4VC31 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC0.51□□□□□ -2.33
CCDC58Q4VC31 FGF7P8-201ENST00000402994 292 ntBASIC0.51□□□□□ -2.33
CCDC58Q4VC31 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC0.51□□□□□ -2.33
CCDC58Q4VC31 ISCA1P1-201ENST00000426679 387 ntBASIC0.51□□□□□ -2.33
CCDC58Q4VC31 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC0.51□□□□□ -2.33
CCDC58Q4VC31 AL591043.1-201ENST00000432461 424 ntBASIC0.51□□□□□ -2.33
CCDC58Q4VC31 KATNBL1P3-201ENST00000443475 909 ntBASIC0.51□□□□□ -2.33
CCDC58Q4VC31 MTCYBP11-201ENST00000447254 1109 ntBASIC0.51□□□□□ -2.33
CCDC58Q4VC31 AC023194.1-201ENST00000493084 308 ntBASIC0.51□□□□□ -2.33
CCDC58Q4VC31 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC0.51□□□□□ -2.33
CCDC58Q4VC31 PDCD5P2-201ENST00000507570 312 ntBASIC0.51□□□□□ -2.33
CCDC58Q4VC31 AC018630.2-201ENST00000534866 2403 ntBASIC0.51□□□□□ -2.33
CCDC58Q4VC31 RN7SL622P-201ENST00000585292 275 ntBASIC0.51□□□□□ -2.33
CCDC58Q4VC31 PCF11-AS1-201ENST00000602322 1516 ntBASIC0.51□□□□□ -2.33
CCDC58Q4VC31 AC133794.1-201ENST00000602731 914 ntBASIC0.51□□□□□ -2.33
CCDC58Q4VC31 AC084824.5-201ENST00000612009 413 ntBASIC0.51□□□□□ -2.33
CCDC58Q4VC31 AC009032.1-201ENST00000617574 431 ntBASIC0.51□□□□□ -2.33
CCDC58Q4VC31 AC013470.4-201ENST00000619978 986 ntBASIC0.51□□□□□ -2.33
CCDC58Q4VC31 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.5□□□□□ -2.33
CCDC58Q4VC31 ATP8A2P2-201ENST00000437678 1568 ntBASIC0.5□□□□□ -2.33
CCDC58Q4VC31 MIR520E-201ENST00000384867 87 ntBASIC0.5□□□□□ -2.33
CCDC58Q4VC31 MIR186-201ENST00000384988 86 ntBASIC0.5□□□□□ -2.33
CCDC58Q4VC31 TAF13P2-201ENST00000416876 286 ntBASIC0.5□□□□□ -2.33
CCDC58Q4VC31 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC0.5□□□□□ -2.33
CCDC58Q4VC31 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC0.5□□□□□ -2.33
CCDC58Q4VC31 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC0.5□□□□□ -2.33
CCDC58Q4VC31 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC0.5□□□□□ -2.33
CCDC58Q4VC31 AC130509.1-201ENST00000464158 433 ntBASIC0.5□□□□□ -2.33
CCDC58Q4VC31 BET1P1-201ENST00000482276 359 ntBASIC0.5□□□□□ -2.33
CCDC58Q4VC31 HMGN1P7-201ENST00000491722 313 ntBASIC0.5□□□□□ -2.33
CCDC58Q4VC31 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC0.5□□□□□ -2.33
CCDC58Q4VC31 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC0.5□□□□□ -2.33
CCDC58Q4VC31 RNU6-965P-201ENST00000516721 96 ntBASIC0.5□□□□□ -2.33
CCDC58Q4VC31 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC0.5□□□□□ -2.33
CCDC58Q4VC31 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC0.5□□□□□ -2.33
CCDC58Q4VC31 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC0.5□□□□□ -2.33
CCDC58Q4VC31 AP001004.1-201ENST00000582468 324 ntBASIC0.5□□□□□ -2.33
CCDC58Q4VC31 AC112220.2-201ENST00000605513 533 ntBASIC0.5□□□□□ -2.33
CCDC58Q4VC31 AL359821.1-201ENST00000605519 182 ntBASIC0.5□□□□□ -2.33
CCDC58Q4VC31 AP001033.2-201ENST00000609701 1003 ntBASIC0.5□□□□□ -2.33
CCDC58Q4VC31 AL590240.4-201ENST00000616908 390 ntBASIC0.5□□□□□ -2.33
CCDC58Q4VC31 AC022513.1-201ENST00000624512 117 ntBASIC0.5□□□□□ -2.33
CCDC58Q4VC31 RNU6-743P-201ENST00000364151 106 ntBASIC0.49□□□□□ -2.33
CCDC58Q4VC31 SNORD115-48-201ENST00000364764 76 ntBASIC0.49□□□□□ -2.33
CCDC58Q4VC31 AC114482.1-201ENST00000418010 247 ntBASIC0.49□□□□□ -2.33
CCDC58Q4VC31 RPL21P111-201ENST00000418453 477 ntBASIC0.49□□□□□ -2.33
CCDC58Q4VC31 RPS15AP12-201ENST00000419498 388 ntBASIC0.49□□□□□ -2.33
CCDC58Q4VC31 AL592045.1-201ENST00000429867 352 ntBASIC0.49□□□□□ -2.33
CCDC58Q4VC31 HSPE1P9-201ENST00000440046 311 ntBASIC0.49□□□□□ -2.33
CCDC58Q4VC31 AC134050.1-201ENST00000495088 933 ntBASIC0.49□□□□□ -2.33
CCDC58Q4VC31 BLNK-209ENST00000495266 440 ntTSL 5 BASIC0.49□□□□□ -2.33
CCDC58Q4VC31 SNORA3.4-201ENST00000515969 96 ntBASIC0.49□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 95.5 ms