Protein–RNA interactions for Protein: Q496Y0

LONRF3, LON peptidase N-terminal domain and RING finger protein 3, humanhuman

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LONRF3Q496Y0 RNU6-371P-201ENST00000364283 108 ntBASIC3.66□□□□□ -1.82
LONRF3Q496Y0 RNU4-76P-201ENST00000364509 141 ntBASIC3.66□□□□□ -1.82
LONRF3Q496Y0 RNU6-1013P-201ENST00000384180 107 ntBASIC3.66□□□□□ -1.82
LONRF3Q496Y0 Y_RNA.474-201ENST00000384341 102 ntBASIC3.66□□□□□ -1.82
LONRF3Q496Y0 RNU6-45P-201ENST00000384471 107 ntBASIC3.66□□□□□ -1.82
LONRF3Q496Y0 AL357075.1-201ENST00000404107 726 ntBASIC3.66□□□□□ -1.82
LONRF3Q496Y0 RPS4XP7-201ENST00000406274 780 ntBASIC3.66□□□□□ -1.82
LONRF3Q496Y0 BPY2DP-201ENST00000422208 265 ntBASIC3.66□□□□□ -1.82
LONRF3Q496Y0 RPS29P2-201ENST00000479278 136 ntBASIC3.66□□□□□ -1.82
LONRF3Q496Y0 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC3.66□□□□□ -1.82
LONRF3Q496Y0 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC3.66□□□□□ -1.82
LONRF3Q496Y0 SNORA19.2-201ENST00000516013 114 ntBASIC3.66□□□□□ -1.82
LONRF3Q496Y0 RNU6-273P-201ENST00000516937 96 ntBASIC3.66□□□□□ -1.82
LONRF3Q496Y0 AC025755.1-201ENST00000521306 278 ntBASIC3.66□□□□□ -1.82
LONRF3Q496Y0 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC3.66□□□□□ -1.82
LONRF3Q496Y0 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC3.66□□□□□ -1.82
LONRF3Q496Y0 AP003122.3-201ENST00000526316 255 ntBASIC3.66□□□□□ -1.82
LONRF3Q496Y0 AC084851.1-201ENST00000529105 249 ntBASIC3.66□□□□□ -1.82
LONRF3Q496Y0 AP000889.2-201ENST00000532684 490 ntBASIC3.66□□□□□ -1.82
LONRF3Q496Y0 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC3.66□□□□□ -1.82
LONRF3Q496Y0 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC3.66□□□□□ -1.82
LONRF3Q496Y0 MIR4782-201ENST00000577987 79 ntBASIC3.66□□□□□ -1.82
LONRF3Q496Y0 AC012493.2-201ENST00000595083 291 ntBASIC3.66□□□□□ -1.82
LONRF3Q496Y0 AC078899.3-201ENST00000599065 212 ntBASIC3.66□□□□□ -1.82
LONRF3Q496Y0 AC012119.1-201ENST00000603184 222 ntBASIC3.66□□□□□ -1.82
LONRF3Q496Y0 YPEL5P2-201ENST00000605553 359 ntBASIC3.66□□□□□ -1.82
LONRF3Q496Y0 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC3.66□□□□□ -1.82
LONRF3Q496Y0 AC135507.2-201ENST00000612443 309 ntBASIC3.66□□□□□ -1.82
LONRF3Q496Y0 AC022418.1-201ENST00000624118 445 ntBASIC3.66□□□□□ -1.82
LONRF3Q496Y0 AC091903.1-201ENST00000624322 454 ntBASIC3.66□□□□□ -1.82
LONRF3Q496Y0 U2.21-201ENST00000637295 81 ntBASIC3.66□□□□□ -1.82
LONRF3Q496Y0 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC3.66□□□□□ -1.82
LONRF3Q496Y0 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
LONRF3Q496Y0 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.65□□□□□ -1.82
LONRF3Q496Y0 MIR148B-201ENST00000362252 99 ntBASIC3.65□□□□□ -1.83
LONRF3Q496Y0 Y_RNA.58-201ENST00000362807 102 ntBASIC3.65□□□□□ -1.83
LONRF3Q496Y0 RNU6-254P-201ENST00000363377 107 ntBASIC3.65□□□□□ -1.83
LONRF3Q496Y0 Y_RNA.154-201ENST00000363624 102 ntBASIC3.65□□□□□ -1.83
LONRF3Q496Y0 RNY3P1-201ENST00000365085 102 ntBASIC3.65□□□□□ -1.83
LONRF3Q496Y0 RNY3-201ENST00000365484 102 ntBASIC3.65□□□□□ -1.83
LONRF3Q496Y0 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
LONRF3Q496Y0 Y_RNA.490-201ENST00000384413 102 ntBASIC3.65□□□□□ -1.83
LONRF3Q496Y0 MIR627-201ENST00000384979 97 ntBASIC3.65□□□□□ -1.83
LONRF3Q496Y0 AL356057.2-201ENST00000403318 432 ntBASIC3.65□□□□□ -1.83
LONRF3Q496Y0 RPLP0P7-201ENST00000416050 667 ntBASIC3.65□□□□□ -1.83
LONRF3Q496Y0 AC233279.1-201ENST00000455300 423 ntBASIC3.65□□□□□ -1.83
LONRF3Q496Y0 RPL7P43-201ENST00000478876 753 ntBASIC3.65□□□□□ -1.83
LONRF3Q496Y0 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.65□□□□□ -1.83
LONRF3Q496Y0 RNU6-572P-201ENST00000516724 80 ntBASIC3.65□□□□□ -1.83
LONRF3Q496Y0 RNU6-1088P-201ENST00000516850 104 ntBASIC3.65□□□□□ -1.83
LONRF3Q496Y0 AL157871.3-201ENST00000557231 293 ntBASIC3.65□□□□□ -1.83
LONRF3Q496Y0 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC3.65□□□□□ -1.83
LONRF3Q496Y0 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC3.65□□□□□ -1.83
LONRF3Q496Y0 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC3.65□□□□□ -1.83
LONRF3Q496Y0 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC3.65□□□□□ -1.83
LONRF3Q496Y0 AL353621.2-201ENST00000605340 133 ntBASIC3.65□□□□□ -1.83
LONRF3Q496Y0 uc_338.15-201ENST00000615470 191 ntBASIC3.65□□□□□ -1.83
LONRF3Q496Y0 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
LONRF3Q496Y0 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
LONRF3Q496Y0 Y_RNA.33-201ENST00000362591 102 ntBASIC3.64□□□□□ -1.83
LONRF3Q496Y0 MIR578-201ENST00000384828 96 ntBASIC3.64□□□□□ -1.83
LONRF3Q496Y0 U3.19-201ENST00000390893 196 ntBASIC3.64□□□□□ -1.83
LONRF3Q496Y0 RPL21P75-201ENST00000396599 483 ntBASIC3.64□□□□□ -1.83
LONRF3Q496Y0 RPL21P28-201ENST00000401418 483 ntBASIC3.64□□□□□ -1.83
LONRF3Q496Y0 NDUFB4P4-201ENST00000404822 243 ntBASIC3.64□□□□□ -1.83
LONRF3Q496Y0 AC023141.4-201ENST00000412031 328 ntBASIC3.64□□□□□ -1.83
LONRF3Q496Y0 RPL21P90-201ENST00000415692 466 ntBASIC3.64□□□□□ -1.83
LONRF3Q496Y0 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC3.64□□□□□ -1.83
LONRF3Q496Y0 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.64□□□□□ -1.83
LONRF3Q496Y0 MTATP6P7-201ENST00000453315 681 ntBASIC3.64□□□□□ -1.83
LONRF3Q496Y0 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC3.64□□□□□ -1.83
LONRF3Q496Y0 RPL21P39-201ENST00000463605 483 ntBASIC3.64□□□□□ -1.83
LONRF3Q496Y0 AC087190.1-201ENST00000484462 480 ntBASIC3.64□□□□□ -1.83
LONRF3Q496Y0 AC093591.1-201ENST00000491435 481 ntBASIC3.64□□□□□ -1.83
LONRF3Q496Y0 RPL21P16-201ENST00000495531 483 ntBASIC3.64□□□□□ -1.83
LONRF3Q496Y0 SNORA14.1-201ENST00000516113 141 ntBASIC3.64□□□□□ -1.83
LONRF3Q496Y0 RNU6-256P-201ENST00000516747 97 ntBASIC3.64□□□□□ -1.83
LONRF3Q496Y0 AC068657.1-201ENST00000520807 306 ntBASIC3.64□□□□□ -1.83
LONRF3Q496Y0 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC3.64□□□□□ -1.83
LONRF3Q496Y0 HPRT1P3-201ENST00000539521 576 ntBASIC3.64□□□□□ -1.83
LONRF3Q496Y0 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC3.64□□□□□ -1.83
LONRF3Q496Y0 MIR3941-201ENST00000582572 103 ntBASIC3.64□□□□□ -1.83
LONRF3Q496Y0 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC3.64□□□□□ -1.83
LONRF3Q496Y0 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
LONRF3Q496Y0 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.64□□□□□ -1.83
LONRF3Q496Y0 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.64□□□□□ -1.83
LONRF3Q496Y0 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.64□□□□□ -1.83
LONRF3Q496Y0 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
LONRF3Q496Y0 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.64□□□□□ -1.83
LONRF3Q496Y0 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.63□□□□□ -1.83
LONRF3Q496Y0 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
LONRF3Q496Y0 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.63□□□□□ -1.83
LONRF3Q496Y0 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC3.63□□□□□ -1.83
LONRF3Q496Y0 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
LONRF3Q496Y0 Y_RNA.67-201ENST00000362870 100 ntBASIC3.63□□□□□ -1.83
LONRF3Q496Y0 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
LONRF3Q496Y0 RPS20P15-201ENST00000412792 311 ntBASIC3.63□□□□□ -1.83
LONRF3Q496Y0 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC3.63□□□□□ -1.83
LONRF3Q496Y0 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC3.63□□□□□ -1.83
LONRF3Q496Y0 MTND4P17-201ENST00000470444 350 ntBASIC3.63□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 189.9 ms