Protein–RNA interactions for Protein: Q05086

UBE3A, Ubiquitin-protein ligase E3A, humanhuman

Predictions only

Length 875 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3AQ05086 Y_RNA.573-201ENST00000384763 105 ntBASIC3.1□□□□□ -1.91
UBE3AQ05086 MIR147B-201ENST00000390185 80 ntBASIC3.1□□□□□ -1.91
UBE3AQ05086 SNORD115-47-201ENST00000391226 86 ntBASIC3.1□□□□□ -1.91
UBE3AQ05086 BTF3P7-201ENST00000407097 488 ntBASIC3.1□□□□□ -1.91
UBE3AQ05086 BX682237.1-201ENST00000415016 335 ntBASIC3.1□□□□□ -1.91
UBE3AQ05086 EIF1P1-201ENST00000421436 341 ntBASIC3.1□□□□□ -1.91
UBE3AQ05086 TRAPPC2P3-201ENST00000443200 321 ntBASIC3.1□□□□□ -1.91
UBE3AQ05086 HIGD1AP2-201ENST00000446367 280 ntBASIC3.1□□□□□ -1.91
UBE3AQ05086 MTND3P16-201ENST00000452205 344 ntBASIC3.1□□□□□ -1.91
UBE3AQ05086 RNU6-333P-201ENST00000459117 107 ntBASIC3.1□□□□□ -1.91
UBE3AQ05086 AL121769.1-201ENST00000469473 401 ntBASIC3.1□□□□□ -1.91
UBE3AQ05086 AC114781.4-201ENST00000513707 639 ntBASIC3.1□□□□□ -1.91
UBE3AQ05086 Y_RNA.687-201ENST00000516558 91 ntBASIC3.1□□□□□ -1.91
UBE3AQ05086 MIR3941-201ENST00000582572 103 ntBASIC3.1□□□□□ -1.91
UBE3AQ05086 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC3.1□□□□□ -1.91
UBE3AQ05086 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC3.1□□□□□ -1.91
UBE3AQ05086 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
UBE3AQ05086 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
UBE3AQ05086 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.09□□□□□ -1.91
UBE3AQ05086 RNY3P3-201ENST00000363816 102 ntBASIC3.09□□□□□ -1.91
UBE3AQ05086 Y_RNA.324-201ENST00000365165 102 ntBASIC3.09□□□□□ -1.91
UBE3AQ05086 RNU4-20P-201ENST00000365601 151 ntBASIC3.09□□□□□ -1.91
UBE3AQ05086 Y_RNA.453-201ENST00000384223 109 ntBASIC3.09□□□□□ -1.91
UBE3AQ05086 MIR9-1-201ENST00000385198 89 ntBASIC3.09□□□□□ -1.91
UBE3AQ05086 AL360182.1-201ENST00000397433 468 ntBASIC3.09□□□□□ -1.91
UBE3AQ05086 AL139095.1-201ENST00000404326 391 ntBASIC3.09□□□□□ -1.91
UBE3AQ05086 RNA5SP274-201ENST00000410484 108 ntBASIC3.09□□□□□ -1.91
UBE3AQ05086 RN7SKP123-201ENST00000410732 291 ntBASIC3.09□□□□□ -1.91
UBE3AQ05086 RPL32P35-201ENST00000415214 394 ntBASIC3.09□□□□□ -1.91
UBE3AQ05086 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC3.09□□□□□ -1.91
UBE3AQ05086 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC3.09□□□□□ -1.91
UBE3AQ05086 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC3.09□□□□□ -1.91
UBE3AQ05086 DYNLL1P5-201ENST00000467158 270 ntBASIC3.09□□□□□ -1.91
UBE3AQ05086 AC107626.1-201ENST00000471084 183 ntBASIC3.09□□□□□ -1.91
UBE3AQ05086 RPL21P99-201ENST00000480369 423 ntBASIC3.09□□□□□ -1.91
UBE3AQ05086 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC3.09□□□□□ -1.91
UBE3AQ05086 RN7SL20P-201ENST00000488827 297 ntBASIC3.09□□□□□ -1.91
UBE3AQ05086 RPL38P4-201ENST00000502376 214 ntBASIC3.09□□□□□ -1.91
UBE3AQ05086 AKIRIN2P1-201ENST00000505898 352 ntBASIC3.09□□□□□ -1.91
UBE3AQ05086 AC091885.1-201ENST00000506658 268 ntBASIC3.09□□□□□ -1.91
UBE3AQ05086 AC011352.1-201ENST00000512300 793 ntBASIC3.09□□□□□ -1.91
UBE3AQ05086 RNA5SP217-201ENST00000515959 91 ntBASIC3.09□□□□□ -1.91
UBE3AQ05086 SCARNA20.6-201ENST00000517251 106 ntBASIC3.09□□□□□ -1.91
UBE3AQ05086 MTND1P5-201ENST00000517906 940 ntBASIC3.09□□□□□ -1.91
UBE3AQ05086 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.09□□□□□ -1.91
UBE3AQ05086 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC3.09□□□□□ -1.91
UBE3AQ05086 AC007318.2-201ENST00000620999 243 ntBASIC3.09□□□□□ -1.91
UBE3AQ05086 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.09□□□□□ -1.92
UBE3AQ05086 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC3.09□□□□□ -1.92
UBE3AQ05086 OR4G1P-203ENST00000641984 1631 ntBASIC3.08□□□□□ -1.92
UBE3AQ05086 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
UBE3AQ05086 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.08□□□□□ -1.92
UBE3AQ05086 RNU6-858P-201ENST00000362436 107 ntBASIC3.08□□□□□ -1.92
UBE3AQ05086 CD3D-202ENST00000392884 476 ntTSL 2 BASIC3.08□□□□□ -1.92
UBE3AQ05086 MORN2-203ENST00000409131 544 ntTSL 5 BASIC3.08□□□□□ -1.92
UBE3AQ05086 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC3.08□□□□□ -1.92
UBE3AQ05086 ZNF885P-201ENST00000420174 1098 ntBASIC3.08□□□□□ -1.92
UBE3AQ05086 AC006026.2-201ENST00000457376 180 ntBASIC3.08□□□□□ -1.92
UBE3AQ05086 AL441985.1-201ENST00000457727 251 ntBASIC3.08□□□□□ -1.92
UBE3AQ05086 SNORD109B-201ENST00000458961 67 ntBASIC3.08□□□□□ -1.92
UBE3AQ05086 SNORD109A-201ENST00000459128 67 ntBASIC3.08□□□□□ -1.92
UBE3AQ05086 MRPL42P6-201ENST00000486397 371 ntBASIC3.08□□□□□ -1.92
UBE3AQ05086 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC3.08□□□□□ -1.92
UBE3AQ05086 RNU6-1038P-201ENST00000516516 104 ntBASIC3.08□□□□□ -1.92
UBE3AQ05086 CENPUP1-201ENST00000526649 1202 ntBASIC3.08□□□□□ -1.92
UBE3AQ05086 GLYCAM1-201ENST00000546596 285 ntBASIC3.08□□□□□ -1.92
UBE3AQ05086 AP003465.2-201ENST00000602571 373 ntBASIC3.08□□□□□ -1.92
UBE3AQ05086 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC3.08□□□□□ -1.92
UBE3AQ05086 AC010378.1-201ENST00000619270 362 ntBASIC3.08□□□□□ -1.92
UBE3AQ05086 MIR3688-2-201ENST00000636963 87 ntBASIC3.08□□□□□ -1.92
UBE3AQ05086 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
UBE3AQ05086 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
UBE3AQ05086 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC3.07□□□□□ -1.92
UBE3AQ05086 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC3.07□□□□□ -1.92
UBE3AQ05086 RNU6-451P-201ENST00000362921 107 ntBASIC3.07□□□□□ -1.92
UBE3AQ05086 Y_RNA.231-201ENST00000364358 102 ntBASIC3.07□□□□□ -1.92
UBE3AQ05086 RNU6-877P-201ENST00000383868 107 ntBASIC3.07□□□□□ -1.92
UBE3AQ05086 RNU6-748P-201ENST00000384648 107 ntBASIC3.07□□□□□ -1.92
UBE3AQ05086 MIR196B-201ENST00000384852 84 ntBASIC3.07□□□□□ -1.92
UBE3AQ05086 RNA5SP219-201ENST00000390940 113 ntBASIC3.07□□□□□ -1.92
UBE3AQ05086 AL512633.1-201ENST00000399931 655 ntBASIC3.07□□□□□ -1.92
UBE3AQ05086 FTH1P15-201ENST00000406984 280 ntBASIC3.07□□□□□ -1.92
UBE3AQ05086 RNU6ATAC25P-201ENST00000408798 117 ntBASIC3.07□□□□□ -1.92
UBE3AQ05086 ARL5AP1-201ENST00000418991 388 ntBASIC3.07□□□□□ -1.92
UBE3AQ05086 RPS3AP44-201ENST00000425466 790 ntBASIC3.07□□□□□ -1.92
UBE3AQ05086 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC3.07□□□□□ -1.92
UBE3AQ05086 CALM1P1-201ENST00000442082 433 ntBASIC3.07□□□□□ -1.92
UBE3AQ05086 EEF1B2P7-201ENST00000451177 676 ntBASIC3.07□□□□□ -1.92
UBE3AQ05086 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC3.07□□□□□ -1.92
UBE3AQ05086 RPL21P93-201ENST00000480465 489 ntBASIC3.07□□□□□ -1.92
UBE3AQ05086 SCARNA17.1-201ENST00000516211 143 ntBASIC3.07□□□□□ -1.92
UBE3AQ05086 SCARNA17.2-201ENST00000516334 143 ntBASIC3.07□□□□□ -1.92
UBE3AQ05086 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
UBE3AQ05086 OR11H5P-201ENST00000554039 926 ntBASIC3.07□□□□□ -1.92
UBE3AQ05086 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC3.07□□□□□ -1.92
UBE3AQ05086 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC3.07□□□□□ -1.92
UBE3AQ05086 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC3.07□□□□□ -1.92
UBE3AQ05086 AC010525.2-201ENST00000590920 195 ntBASIC3.07□□□□□ -1.92
UBE3AQ05086 AC002044.1-201ENST00000606707 158 ntBASIC3.07□□□□□ -1.92
UBE3AQ05086 SCARNA17.4-201ENST00000614296 143 ntBASIC3.07□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 89.2 ms