Protein–RNA interactions for Protein: Q00341

HDLBP, Vigilin, humanhuman

Known RBP Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBPQ00341 RNU6-105P-201ENST00000363909 104 ntBASIC4.37□□□□□ -1.71
HDLBPQ00341 RNU1-33P-201ENST00000364249 162 ntBASIC4.37□□□□□ -1.71
HDLBPQ00341 U8.8-201ENST00000365399 135 ntBASIC4.37□□□□□ -1.71
HDLBPQ00341 AC117470.1-201ENST00000381974 330 ntBASIC4.37□□□□□ -1.71
HDLBPQ00341 RNU6-474P-201ENST00000384243 107 ntBASIC4.37□□□□□ -1.71
HDLBPQ00341 RNU6-842P-201ENST00000384269 107 ntBASIC4.37□□□□□ -1.71
HDLBPQ00341 snosnR66.1-201ENST00000391095 99 ntBASIC4.37□□□□□ -1.71
HDLBPQ00341 Z82205.1-201ENST00000428456 297 ntBASIC4.37□□□□□ -1.71
HDLBPQ00341 AC011816.1-201ENST00000441346 546 ntBASIC4.37□□□□□ -1.71
HDLBPQ00341 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC4.37□□□□□ -1.71
HDLBPQ00341 RPS29P20-201ENST00000489592 171 ntBASIC4.37□□□□□ -1.71
HDLBPQ00341 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC4.37□□□□□ -1.71
HDLBPQ00341 SCARNA15.1-201ENST00000516384 125 ntBASIC4.37□□□□□ -1.71
HDLBPQ00341 RNU6-988P-201ENST00000519081 107 ntBASIC4.37□□□□□ -1.71
HDLBPQ00341 MIR4474-201ENST00000579189 78 ntBASIC4.37□□□□□ -1.71
HDLBPQ00341 MIR3200-201ENST00000580767 85 ntBASIC4.37□□□□□ -1.71
HDLBPQ00341 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC4.37□□□□□ -1.71
HDLBPQ00341 PART1_1.1-201ENST00000611761 217 ntBASIC4.37□□□□□ -1.71
HDLBPQ00341 DLEU2_6.2-201ENST00000620994 136 ntBASIC4.37□□□□□ -1.71
HDLBPQ00341 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
HDLBPQ00341 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC4.37□□□□□ -1.71
HDLBPQ00341 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC4.37□□□□□ -1.71
HDLBPQ00341 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC4.36□□□□□ -1.71
HDLBPQ00341 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
HDLBPQ00341 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
HDLBPQ00341 AC091152.2-201ENST00000591628 2569 ntBASIC4.36□□□□□ -1.71
HDLBPQ00341 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
HDLBPQ00341 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC4.36□□□□□ -1.71
HDLBPQ00341 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
HDLBPQ00341 RNU6-428P-201ENST00000362942 107 ntBASIC4.36□□□□□ -1.71
HDLBPQ00341 RNU6-336P-201ENST00000364891 107 ntBASIC4.36□□□□□ -1.71
HDLBPQ00341 Y_RNA.473-201ENST00000384333 102 ntBASIC4.36□□□□□ -1.71
HDLBPQ00341 AC245291.1-201ENST00000419501 328 ntBASIC4.36□□□□□ -1.71
HDLBPQ00341 EIF4EP2-201ENST00000422816 654 ntBASIC4.36□□□□□ -1.71
HDLBPQ00341 IGKV1OR9-2-201ENST00000431378 277 ntBASIC4.36□□□□□ -1.71
HDLBPQ00341 SETP5-201ENST00000437270 562 ntBASIC4.36□□□□□ -1.71
HDLBPQ00341 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC4.36□□□□□ -1.71
HDLBPQ00341 AC010265.1-201ENST00000513509 211 ntBASIC4.36□□□□□ -1.71
HDLBPQ00341 RNU6-470P-201ENST00000515954 104 ntBASIC4.36□□□□□ -1.71
HDLBPQ00341 SCARNA16.2-201ENST00000516520 172 ntBASIC4.36□□□□□ -1.71
HDLBPQ00341 Y_RNA.711-201ENST00000516993 102 ntBASIC4.36□□□□□ -1.71
HDLBPQ00341 CR383656.8-201ENST00000549046 145 ntBASIC4.36□□□□□ -1.71
HDLBPQ00341 HMGN2P15-201ENST00000585707 270 ntBASIC4.36□□□□□ -1.71
HDLBPQ00341 AC006504.6-201ENST00000590142 199 ntBASIC4.36□□□□□ -1.71
HDLBPQ00341 AC006077.1-201ENST00000604746 343 ntBASIC4.36□□□□□ -1.71
HDLBPQ00341 MIR3976-201ENST00000606807 139 ntBASIC4.36□□□□□ -1.71
HDLBPQ00341 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC4.36□□□□□ -1.71
HDLBPQ00341 uc_338.22-201ENST00000622722 187 ntBASIC4.36□□□□□ -1.71
HDLBPQ00341 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
HDLBPQ00341 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
HDLBPQ00341 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC4.36□□□□□ -1.71
HDLBPQ00341 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC4.36□□□□□ -1.71
HDLBPQ00341 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC4.35□□□□□ -1.71
HDLBPQ00341 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
HDLBPQ00341 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
HDLBPQ00341 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
HDLBPQ00341 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
HDLBPQ00341 AC010680.1-201ENST00000590024 3590 ntBASIC4.35□□□□□ -1.71
HDLBPQ00341 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
HDLBPQ00341 RNU6-227P-201ENST00000362865 103 ntBASIC4.35□□□□□ -1.71
HDLBPQ00341 RNU6-942P-201ENST00000363002 107 ntBASIC4.35□□□□□ -1.71
HDLBPQ00341 RNU6-1059P-201ENST00000363752 98 ntBASIC4.35□□□□□ -1.71
HDLBPQ00341 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
HDLBPQ00341 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC4.35□□□□□ -1.71
HDLBPQ00341 RNU6-55P-201ENST00000411092 107 ntBASIC4.35□□□□□ -1.71
HDLBPQ00341 UBE2Q2P12-201ENST00000414573 204 ntBASIC4.35□□□□□ -1.71
HDLBPQ00341 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC4.35□□□□□ -1.71
HDLBPQ00341 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC4.35□□□□□ -1.71
HDLBPQ00341 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC4.35□□□□□ -1.71
HDLBPQ00341 AL714022.1-201ENST00000439897 151 ntBASIC4.35□□□□□ -1.71
HDLBPQ00341 CYCSP32-201ENST00000440548 321 ntBASIC4.35□□□□□ -1.71
HDLBPQ00341 AL137792.2-201ENST00000443484 235 ntBASIC4.35□□□□□ -1.71
HDLBPQ00341 MIR2053-201ENST00000459295 91 ntBASIC4.35□□□□□ -1.71
HDLBPQ00341 RN7SL601P-201ENST00000471221 293 ntBASIC4.35□□□□□ -1.71
HDLBPQ00341 AC116655.1-201ENST00000508324 901 ntBASIC4.35□□□□□ -1.71
HDLBPQ00341 SNORD19.2-201ENST00000516978 73 ntBASIC4.35□□□□□ -1.71
HDLBPQ00341 SNORA31.18-201ENST00000517043 134 ntBASIC4.35□□□□□ -1.71
HDLBPQ00341 AC008011.1-201ENST00000545989 227 ntBASIC4.35□□□□□ -1.71
HDLBPQ00341 AC020895.1-201ENST00000595362 272 ntBASIC4.35□□□□□ -1.71
HDLBPQ00341 AC024581.2-201ENST00000619986 252 ntBASIC4.35□□□□□ -1.71
HDLBPQ00341 MIR3529-201ENST00000637713 78 ntBASIC4.35□□□□□ -1.71
HDLBPQ00341 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC4.35□□□□□ -1.71
HDLBPQ00341 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
HDLBPQ00341 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
HDLBPQ00341 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC4.35□□□□□ -1.71
HDLBPQ00341 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
HDLBPQ00341 AC004944.1-201ENST00000517807 3059 ntBASIC4.35□□□□□ -1.71
HDLBPQ00341 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC4.34□□□□□ -1.71
HDLBPQ00341 AC007496.3-201ENST00000624987 3443 ntBASIC4.34□□□□□ -1.71
HDLBPQ00341 AL356274.2-201ENST00000624379 3752 ntBASIC4.34□□□□□ -1.71
HDLBPQ00341 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
HDLBPQ00341 RNU6-858P-201ENST00000362436 107 ntBASIC4.34□□□□□ -1.71
HDLBPQ00341 RNU6-1115P-201ENST00000362490 106 ntBASIC4.34□□□□□ -1.71
HDLBPQ00341 Y_RNA.162-201ENST00000363683 102 ntBASIC4.34□□□□□ -1.71
HDLBPQ00341 RNU6-692P-201ENST00000384496 107 ntBASIC4.34□□□□□ -1.71
HDLBPQ00341 SNORD116-20-201ENST00000384529 92 ntBASIC4.34□□□□□ -1.71
HDLBPQ00341 RNU6-331P-201ENST00000384724 107 ntBASIC4.34□□□□□ -1.71
HDLBPQ00341 BTF3L4P2-201ENST00000392798 346 ntBASIC4.34□□□□□ -1.71
HDLBPQ00341 AC005300.1-201ENST00000428401 373 ntBASIC4.34□□□□□ -1.71
HDLBPQ00341 AC008155.2-201ENST00000464337 397 ntBASIC4.34□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 116.4 ms