Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC2.51□□□□□ -2.01
CX3CL1P78423 SNORA31.6-201ENST00000516241 130 ntBASIC2.51□□□□□ -2.01
CX3CL1P78423 RN7SKP282-201ENST00000516824 299 ntBASIC2.51□□□□□ -2.01
CX3CL1P78423 AC007536.1-201ENST00000533382 349 ntBASIC2.51□□□□□ -2.01
CX3CL1P78423 AC025423.5-201ENST00000550230 219 ntBASIC2.51□□□□□ -2.01
CX3CL1P78423 SARNP-203ENST00000552080 726 ntTSL 2 BASIC2.51□□□□□ -2.01
CX3CL1P78423 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC2.51□□□□□ -2.01
CX3CL1P78423 MIR5680-201ENST00000577577 84 ntBASIC2.51□□□□□ -2.01
CX3CL1P78423 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC2.51□□□□□ -2.01
CX3CL1P78423 MIR3944-201ENST00000581277 108 ntBASIC2.51□□□□□ -2.01
CX3CL1P78423 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC2.51□□□□□ -2.01
CX3CL1P78423 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC2.51□□□□□ -2.01
CX3CL1P78423 OR1M4P-201ENST00000589199 287 ntBASIC2.51□□□□□ -2.01
CX3CL1P78423 SRGNP1-201ENST00000603392 451 ntBASIC2.51□□□□□ -2.01
CX3CL1P78423 AL670379.10-201ENST00000604330 253 ntBASIC2.51□□□□□ -2.01
CX3CL1P78423 BNIP3P10-201ENST00000605360 577 ntBASIC2.51□□□□□ -2.01
CX3CL1P78423 AL670379.9-201ENST00000605428 253 ntBASIC2.51□□□□□ -2.01
CX3CL1P78423 MIR7112-201ENST00000616126 65 ntBASIC2.51□□□□□ -2.01
CX3CL1P78423 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC2.51□□□□□ -2.01
CX3CL1P78423 AL136221.1-201ENST00000621449 509 ntBASIC2.51□□□□□ -2.01
CX3CL1P78423 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC2.51□□□□□ -2.01
CX3CL1P78423 AC092435.3-201ENST00000565538 3654 ntBASIC2.51□□□□□ -2.01
CX3CL1P78423 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC2.51□□□□□ -2.01
CX3CL1P78423 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
CX3CL1P78423 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC2.51□□□□□ -2.01
CX3CL1P78423 CASC19-280ENST00000642102 1351 ntBASIC2.5□□□□□ -2.01
CX3CL1P78423 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC2.5□□□□□ -2.01
CX3CL1P78423 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
CX3CL1P78423 RNU6-1252P-201ENST00000363054 104 ntBASIC2.5□□□□□ -2.01
CX3CL1P78423 SNORD73A-201ENST00000386062 65 ntBASIC2.5□□□□□ -2.01
CX3CL1P78423 AL512633.1-201ENST00000399931 655 ntBASIC2.5□□□□□ -2.01
CX3CL1P78423 MIR887-201ENST00000401258 79 ntBASIC2.5□□□□□ -2.01
CX3CL1P78423 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC2.5□□□□□ -2.01
CX3CL1P78423 NDUFA5P4-201ENST00000436704 385 ntBASIC2.5□□□□□ -2.01
CX3CL1P78423 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC2.5□□□□□ -2.01
CX3CL1P78423 AL031274.1-201ENST00000450334 232 ntBASIC2.5□□□□□ -2.01
CX3CL1P78423 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
CX3CL1P78423 AC006026.2-201ENST00000457376 180 ntBASIC2.5□□□□□ -2.01
CX3CL1P78423 AP001324.2-201ENST00000461163 319 ntBASIC2.5□□□□□ -2.01
CX3CL1P78423 RN7SL863P-201ENST00000462370 296 ntBASIC2.5□□□□□ -2.01
CX3CL1P78423 RN7SL807P-201ENST00000470923 297 ntBASIC2.5□□□□□ -2.01
CX3CL1P78423 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC2.5□□□□□ -2.01
CX3CL1P78423 AC018710.1-201ENST00000506509 158 ntBASIC2.5□□□□□ -2.01
CX3CL1P78423 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC2.5□□□□□ -2.01
CX3CL1P78423 RNU5F-8P-201ENST00000515941 111 ntBASIC2.5□□□□□ -2.01
CX3CL1P78423 SNORA31.26-201ENST00000517250 137 ntBASIC2.5□□□□□ -2.01
CX3CL1P78423 AP005597.4-201ENST00000526762 229 ntBASIC2.5□□□□□ -2.01
CX3CL1P78423 CR383656.8-201ENST00000549046 145 ntBASIC2.5□□□□□ -2.01
CX3CL1P78423 POC1B-211ENST00000549504 581 ntTSL 5 BASIC2.5□□□□□ -2.01
CX3CL1P78423 AC018638.8-201ENST00000588755 281 ntBASIC2.5□□□□□ -2.01
CX3CL1P78423 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC2.5□□□□□ -2.01
CX3CL1P78423 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
CX3CL1P78423 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC2.5□□□□□ -2.01
CX3CL1P78423 AC018692.3-201ENST00000623929 123 ntBASIC2.5□□□□□ -2.01
CX3CL1P78423 AC138627.2-201ENST00000624202 601 ntBASIC2.5□□□□□ -2.01
CX3CL1P78423 U4.7-201ENST00000638126 106 ntBASIC2.5□□□□□ -2.01
CX3CL1P78423 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC2.5□□□□□ -2.01
CX3CL1P78423 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.5□□□□□ -2.01
CX3CL1P78423 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC2.49□□□□□ -2.01
CX3CL1P78423 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
CX3CL1P78423 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
CX3CL1P78423 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC2.49□□□□□ -2.01
CX3CL1P78423 RNU6-254P-201ENST00000363377 107 ntBASIC2.49□□□□□ -2.01
CX3CL1P78423 SNORD113-7-201ENST00000363762 77 ntBASIC2.49□□□□□ -2.01
CX3CL1P78423 Y_RNA.390-201ENST00000383932 102 ntBASIC2.49□□□□□ -2.01
CX3CL1P78423 Y_RNA.414-201ENST00000384011 101 ntBASIC2.49□□□□□ -2.01
CX3CL1P78423 U3.26-201ENST00000391236 204 ntBASIC2.49□□□□□ -2.01
CX3CL1P78423 FGF7P8-201ENST00000402994 292 ntBASIC2.49□□□□□ -2.01
CX3CL1P78423 AL117339.3-201ENST00000418733 162 ntBASIC2.49□□□□□ -2.01
CX3CL1P78423 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC2.49□□□□□ -2.01
CX3CL1P78423 AL365400.1-201ENST00000431854 640 ntBASIC2.49□□□□□ -2.01
CX3CL1P78423 AC006445.1-201ENST00000491925 405 ntBASIC2.49□□□□□ -2.01
CX3CL1P78423 MTCO2P30-201ENST00000503662 364 ntBASIC2.49□□□□□ -2.01
CX3CL1P78423 PRDX4P1-201ENST00000507189 574 ntBASIC2.49□□□□□ -2.01
CX3CL1P78423 MTCYBP40-201ENST00000509390 1135 ntBASIC2.49□□□□□ -2.01
CX3CL1P78423 AC098799.2-201ENST00000509466 868 ntBASIC2.49□□□□□ -2.01
CX3CL1P78423 RN7SKP43-201ENST00000516173 320 ntBASIC2.49□□□□□ -2.01
CX3CL1P78423 SCARNA11.3-201ENST00000517276 130 ntBASIC2.49□□□□□ -2.01
CX3CL1P78423 AC109479.2-201ENST00000517842 174 ntBASIC2.49□□□□□ -2.01
CX3CL1P78423 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC2.49□□□□□ -2.01
CX3CL1P78423 AC087854.1-201ENST00000519706 414 ntBASIC2.49□□□□□ -2.01
CX3CL1P78423 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC2.49□□□□□ -2.01
CX3CL1P78423 PSMA3P-201ENST00000555485 635 ntBASIC2.49□□□□□ -2.01
CX3CL1P78423 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC2.49□□□□□ -2.01
CX3CL1P78423 RPL23AP78-201ENST00000599928 470 ntBASIC2.49□□□□□ -2.01
CX3CL1P78423 AP000787.2-201ENST00000604432 568 ntBASIC2.49□□□□□ -2.01
CX3CL1P78423 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC2.49□□□□□ -2.01
CX3CL1P78423 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC2.49□□□□□ -2.01
CX3CL1P78423 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC2.49□□□□□ -2.01
CX3CL1P78423 ATP5A1P2-202ENST00000616464 443 ntBASIC2.49□□□□□ -2.01
CX3CL1P78423 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC2.49□□□□□ -2.01
CX3CL1P78423 MIR3529-201ENST00000637713 78 ntBASIC2.49□□□□□ -2.01
CX3CL1P78423 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC2.49□□□□□ -2.01
CX3CL1P78423 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
CX3CL1P78423 RBBP8P1-201ENST00000449447 1844 ntBASIC2.48□□□□□ -2.01
CX3CL1P78423 SNORA68.1-201ENST00000364537 132 ntBASIC2.48□□□□□ -2.01
CX3CL1P78423 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC2.48□□□□□ -2.01
CX3CL1P78423 RNU6-1083P-201ENST00000384022 107 ntBASIC2.48□□□□□ -2.01
CX3CL1P78423 SNORA7.4-201ENST00000384249 137 ntBASIC2.48□□□□□ -2.01
CX3CL1P78423 SNORD15B-201ENST00000384714 146 ntBASIC2.48□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 91.9 ms