Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 AC097372.5-201ENST00000623665 376 ntBASIC-0.56□□□□□ -2.5
RPL39P62891 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC-0.57□□□□□ -2.5
RPL39P62891 RNU6-1249P-201ENST00000363237 111 ntBASIC-0.57□□□□□ -2.5
RPL39P62891 SNORD114-26-201ENST00000363543 72 ntBASIC-0.57□□□□□ -2.5
RPL39P62891 RN7SKP266-201ENST00000410232 287 ntBASIC-0.57□□□□□ -2.5
RPL39P62891 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC-0.57□□□□□ -2.5
RPL39P62891 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC-0.57□□□□□ -2.5
RPL39P62891 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC-0.57□□□□□ -2.5
RPL39P62891 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC-0.57□□□□□ -2.5
RPL39P62891 NDUFB4P10-201ENST00000452541 359 ntBASIC-0.57□□□□□ -2.5
RPL39P62891 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC-0.57□□□□□ -2.5
RPL39P62891 RNA5SP503-201ENST00000517047 117 ntBASIC-0.57□□□□□ -2.5
RPL39P62891 AC024060.1-201ENST00000607052 494 ntBASIC-0.57□□□□□ -2.5
RPL39P62891 MIR5739-201ENST00000619803 80 ntBASIC-0.57□□□□□ -2.5
RPL39P62891 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC-0.58□□□□□ -2.5
RPL39P62891 SNORD115-3-201ENST00000363100 82 ntBASIC-0.58□□□□□ -2.5
RPL39P62891 Y_RNA.238-201ENST00000364441 102 ntBASIC-0.58□□□□□ -2.5
RPL39P62891 RNU6-1074P-201ENST00000383995 104 ntBASIC-0.58□□□□□ -2.5
RPL39P62891 AL161935.2-201ENST00000414627 60 ntBASIC-0.58□□□□□ -2.5
RPL39P62891 SNX2P2-201ENST00000424553 323 ntBASIC-0.58□□□□□ -2.5
RPL39P62891 DAP3P1-201ENST00000441522 278 ntBASIC-0.58□□□□□ -2.5
RPL39P62891 AC016717.1-201ENST00000448918 286 ntBASIC-0.58□□□□□ -2.5
RPL39P62891 SNRPGP12-201ENST00000449481 213 ntBASIC-0.58□□□□□ -2.5
RPL39P62891 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC-0.58□□□□□ -2.5
RPL39P62891 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC-0.58□□□□□ -2.5
RPL39P62891 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC-0.58□□□□□ -2.5
RPL39P62891 NACAP3-201ENST00000552100 481 ntBASIC-0.58□□□□□ -2.5
RPL39P62891 AL132857.1-201ENST00000555180 708 ntBASIC-0.58□□□□□ -2.5
RPL39P62891 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC-0.58□□□□□ -2.5
RPL39P62891 AC015688.6-201ENST00000577737 104 ntBASIC-0.58□□□□□ -2.5
RPL39P62891 MIR3664-201ENST00000579074 99 ntBASIC-0.58□□□□□ -2.5
RPL39P62891 BPTFP1-201ENST00000579209 492 ntBASIC-0.58□□□□□ -2.5
RPL39P62891 AP003465.2-201ENST00000602571 373 ntBASIC-0.58□□□□□ -2.5
RPL39P62891 AC091057.3-201ENST00000602684 733 ntBASIC-0.58□□□□□ -2.5
RPL39P62891 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC-0.58□□□□□ -2.5
RPL39P62891 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC-0.58□□□□□ -2.5
RPL39P62891 AC008133.2-201ENST00000624540 351 ntBASIC-0.58□□□□□ -2.5
RPL39P62891 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC-0.58□□□□□ -2.5
RPL39P62891 MIR95-201ENST00000385072 81 ntBASIC-0.59□□□□□ -2.5
RPL39P62891 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC-0.59□□□□□ -2.5
RPL39P62891 AC096649.2-201ENST00000416186 393 ntBASIC-0.59□□□□□ -2.5
RPL39P62891 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC-0.59□□□□□ -2.5
RPL39P62891 AC006548.1-201ENST00000427470 102 ntBASIC-0.59□□□□□ -2.5
RPL39P62891 NANOGP2-201ENST00000435391 727 ntBASIC-0.59□□□□□ -2.5
RPL39P62891 TIMM9P1-201ENST00000436122 256 ntBASIC-0.59□□□□□ -2.5
RPL39P62891 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC-0.59□□□□□ -2.5
RPL39P62891 Y_RNA.670-201ENST00000516255 105 ntBASIC-0.59□□□□□ -2.5
RPL39P62891 AC008562.1-201ENST00000521763 330 ntBASIC-0.59□□□□□ -2.5
RPL39P62891 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC-0.59□□□□□ -2.5
RPL39P62891 ZKSCAN7P1-201ENST00000543668 673 ntBASIC-0.59□□□□□ -2.5
RPL39P62891 Z82243.1-201ENST00000609432 473 ntBASIC-0.59□□□□□ -2.5
RPL39P62891 CR381572.1-201ENST00000625098 102 ntBASIC-0.59□□□□□ -2.5
RPL39P62891 AC068647.2-201ENST00000637380 353 ntBASIC-0.59□□□□□ -2.5
RPL39P62891 ANKRD36BP1-202ENST00000604892 1417 ntBASIC-0.59□□□□□ -2.5
RPL39P62891 MTND5P16-201ENST00000460269 1703 ntBASIC-0.6□□□□□ -2.51
RPL39P62891 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC-0.6□□□□□ -2.51
RPL39P62891 RNU6ATAC8P-201ENST00000408460 126 ntBASIC-0.6□□□□□ -2.51
RPL39P62891 AL606662.1-201ENST00000445763 553 ntBASIC-0.6□□□□□ -2.51
RPL39P62891 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC-0.6□□□□□ -2.51
RPL39P62891 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC-0.6□□□□□ -2.51
RPL39P62891 HMGN1P13-201ENST00000505795 138 ntBASIC-0.6□□□□□ -2.51
RPL39P62891 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC-0.6□□□□□ -2.51
RPL39P62891 AC069113.3-201ENST00000521019 150 ntBASIC-0.6□□□□□ -2.51
RPL39P62891 AL357312.1-201ENST00000603879 298 ntBASIC-0.6□□□□□ -2.51
RPL39P62891 AC055764.2-201ENST00000610089 670 ntBASIC-0.6□□□□□ -2.51
RPL39P62891 AC130324.3-201ENST00000614165 542 ntBASIC-0.6□□□□□ -2.51
RPL39P62891 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC-0.6□□□□□ -2.51
RPL39P62891 RNU6-486P-201ENST00000363116 107 ntBASIC-0.61□□□□□ -2.51
RPL39P62891 RNU6-833P-201ENST00000363486 107 ntBASIC-0.61□□□□□ -2.51
RPL39P62891 RNU4-41P-201ENST00000364426 143 ntBASIC-0.61□□□□□ -2.51
RPL39P62891 MIR106A-201ENST00000384870 81 ntBASIC-0.61□□□□□ -2.51
RPL39P62891 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC-0.61□□□□□ -2.51
RPL39P62891 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC-0.61□□□□□ -2.51
RPL39P62891 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC-0.61□□□□□ -2.51
RPL39P62891 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC-0.61□□□□□ -2.51
RPL39P62891 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC-0.61□□□□□ -2.51
RPL39P62891 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC-0.61□□□□□ -2.51
RPL39P62891 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC-0.61□□□□□ -2.51
RPL39P62891 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC-0.61□□□□□ -2.51
RPL39P62891 AC091874.1-201ENST00000511402 339 ntBASIC-0.61□□□□□ -2.51
RPL39P62891 CYB5AP5-201ENST00000549779 389 ntBASIC-0.61□□□□□ -2.51
RPL39P62891 MIR4764-201ENST00000580680 88 ntBASIC-0.61□□□□□ -2.51
RPL39P62891 BBIP1P1-201ENST00000602999 279 ntBASIC-0.61□□□□□ -2.51
RPL39P62891 RNU4-5P-201ENST00000607255 135 ntBASIC-0.61□□□□□ -2.51
RPL39P62891 AP002826.1-201ENST00000608835 315 ntBASIC-0.61□□□□□ -2.51
RPL39P62891 AC021506.2-201ENST00000612354 169 ntBASIC-0.61□□□□□ -2.51
RPL39P62891 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC-0.61□□□□□ -2.51
RPL39P62891 uc_338.15-201ENST00000615470 191 ntBASIC-0.61□□□□□ -2.51
RPL39P62891 AL049737.1-201ENST00000413920 1403 ntBASIC-0.62□□□□□ -2.51
RPL39P62891 RNU4-79P-201ENST00000362764 141 ntBASIC-0.62□□□□□ -2.51
RPL39P62891 RNA5SP275-201ENST00000363936 118 ntBASIC-0.62□□□□□ -2.51
RPL39P62891 Y_RNA.493-201ENST00000384422 102 ntBASIC-0.62□□□□□ -2.51
RPL39P62891 AL136372.1-201ENST00000403060 228 ntBASIC-0.62□□□□□ -2.51
RPL39P62891 RNU2-49P-201ENST00000410666 184 ntBASIC-0.62□□□□□ -2.51
RPL39P62891 MTCO3P5-201ENST00000433620 714 ntBASIC-0.62□□□□□ -2.51
RPL39P62891 RPS15AP9-201ENST00000439856 381 ntBASIC-0.62□□□□□ -2.51
RPL39P62891 KATNBL1P6-201ENST00000453433 915 ntBASIC-0.62□□□□□ -2.51
RPL39P62891 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC-0.62□□□□□ -2.51
RPL39P62891 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC-0.62□□□□□ -2.51
RPL39P62891 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC-0.62□□□□□ -2.51
Retrieved 100 of 98,524 protein–RNA pairs in 142.8 ms