Protein–RNA interactions for Protein: P61011

SRP54, Signal recognition particle 54 kDa protein, humanhuman

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54P61011 ISCA1P6-201ENST00000427740 390 ntBASIC2.29□□□□□ -2.04
SRP54P61011 AL139415.2-201ENST00000431968 163 ntBASIC2.29□□□□□ -2.04
SRP54P61011 GPR143P-201ENST00000434155 205 ntBASIC2.29□□□□□ -2.04
SRP54P61011 IFNA11P-201ENST00000446352 526 ntBASIC2.29□□□□□ -2.04
SRP54P61011 AL360271.2-201ENST00000447710 161 ntBASIC2.29□□□□□ -2.04
SRP54P61011 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.29□□□□□ -2.04
SRP54P61011 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC2.29□□□□□ -2.04
SRP54P61011 AC006026.2-201ENST00000457376 180 ntBASIC2.29□□□□□ -2.04
SRP54P61011 CYP2C59P-201ENST00000457790 269 ntBASIC2.29□□□□□ -2.04
SRP54P61011 MTND3P7-201ENST00000474435 343 ntBASIC2.29□□□□□ -2.04
SRP54P61011 RPL23AP49-201ENST00000492925 468 ntBASIC2.29□□□□□ -2.04
SRP54P61011 AC117522.2-201ENST00000510049 657 ntBASIC2.29□□□□□ -2.04
SRP54P61011 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.29□□□□□ -2.04
SRP54P61011 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC2.29□□□□□ -2.04
SRP54P61011 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC2.29□□□□□ -2.04
SRP54P61011 PSMA3P-201ENST00000555485 635 ntBASIC2.29□□□□□ -2.04
SRP54P61011 MIR5692A1-201ENST00000580523 69 ntBASIC2.29□□□□□ -2.04
SRP54P61011 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC2.29□□□□□ -2.04
SRP54P61011 AC098848.2-201ENST00000588023 330 ntBASIC2.29□□□□□ -2.04
SRP54P61011 SNORD14A-201ENST00000606526 91 ntBASIC2.29□□□□□ -2.04
SRP54P61011 AP001486.3-201ENST00000615334 372 ntBASIC2.29□□□□□ -2.04
SRP54P61011 AC093648.1-201ENST00000623546 606 ntBASIC2.29□□□□□ -2.04
SRP54P61011 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC2.29□□□□□ -2.04
SRP54P61011 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
SRP54P61011 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
SRP54P61011 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
SRP54P61011 OR4G2P-201ENST00000328113 903 ntBASIC2.28□□□□□ -2.04
SRP54P61011 SNORD114-19-201ENST00000363072 75 ntBASIC2.28□□□□□ -2.04
SRP54P61011 Y_RNA.367-201ENST00000365544 101 ntBASIC2.28□□□□□ -2.04
SRP54P61011 RNU6-108P-201ENST00000365558 107 ntBASIC2.28□□□□□ -2.04
SRP54P61011 RNU6-297P-201ENST00000384636 107 ntBASIC2.28□□□□□ -2.04
SRP54P61011 Y_RNA.576-201ENST00000384781 102 ntBASIC2.28□□□□□ -2.04
SRP54P61011 RNU6-248P-201ENST00000410720 107 ntBASIC2.28□□□□□ -2.04
SRP54P61011 MTCO3P5-201ENST00000433620 714 ntBASIC2.28□□□□□ -2.04
SRP54P61011 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC2.28□□□□□ -2.04
SRP54P61011 AC104058.1-201ENST00000448028 297 ntBASIC2.28□□□□□ -2.04
SRP54P61011 AC012308.1-201ENST00000451232 178 ntBASIC2.28□□□□□ -2.04
SRP54P61011 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC2.28□□□□□ -2.04
SRP54P61011 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC2.28□□□□□ -2.04
SRP54P61011 MTCO2P6-201ENST00000463134 685 ntBASIC2.28□□□□□ -2.04
SRP54P61011 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC2.28□□□□□ -2.04
SRP54P61011 CBX3P7-201ENST00000532876 502 ntBASIC2.28□□□□□ -2.04
SRP54P61011 AC087241.2-201ENST00000535801 324 ntBASIC2.28□□□□□ -2.04
SRP54P61011 AC135279.1-201ENST00000543493 504 ntBASIC2.28□□□□□ -2.04
SRP54P61011 CR383656.8-201ENST00000549046 145 ntBASIC2.28□□□□□ -2.04
SRP54P61011 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC2.28□□□□□ -2.04
SRP54P61011 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC2.28□□□□□ -2.04
SRP54P61011 AC012414.6-201ENST00000568241 401 ntBASIC2.28□□□□□ -2.04
SRP54P61011 AC105137.2-201ENST00000569073 466 ntBASIC2.28□□□□□ -2.04
SRP54P61011 AC137800.2-201ENST00000574375 120 ntBASIC2.28□□□□□ -2.04
SRP54P61011 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.28□□□□□ -2.04
SRP54P61011 MIR5007-201ENST00000583098 95 ntBASIC2.28□□□□□ -2.04
SRP54P61011 BNIP3P30-201ENST00000601184 574 ntBASIC2.28□□□□□ -2.04
SRP54P61011 AC245014.2-201ENST00000603689 287 ntBASIC2.28□□□□□ -2.04
SRP54P61011 AL670379.4-201ENST00000605279 254 ntBASIC2.28□□□□□ -2.04
SRP54P61011 AC246785.4-201ENST00000605374 287 ntBASIC2.28□□□□□ -2.04
SRP54P61011 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.28□□□□□ -2.04
SRP54P61011 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.28□□□□□ -2.04
SRP54P61011 ATM-228ENST00000639240 498 ntTSL 5 BASIC2.28□□□□□ -2.04
SRP54P61011 ATM-230ENST00000640388 578 ntTSL 5 BASIC2.28□□□□□ -2.04
SRP54P61011 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.28□□□□□ -2.04
SRP54P61011 AC005336.3-201ENST00000623833 2679 ntBASIC2.28□□□□□ -2.04
SRP54P61011 RBBP8P1-201ENST00000449447 1844 ntBASIC2.28□□□□□ -2.04
SRP54P61011 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.28□□□□□ -2.05
SRP54P61011 AC131280.1-202ENST00000624067 4211 ntBASIC2.28□□□□□ -2.05
SRP54P61011 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.27□□□□□ -2.05
SRP54P61011 RNU6-1010P-201ENST00000362757 107 ntBASIC2.27□□□□□ -2.05
SRP54P61011 RNU6-1097P-201ENST00000363586 107 ntBASIC2.27□□□□□ -2.05
SRP54P61011 RNU6-371P-201ENST00000364283 108 ntBASIC2.27□□□□□ -2.05
SRP54P61011 RNU6-384P-201ENST00000364900 104 ntBASIC2.27□□□□□ -2.05
SRP54P61011 SNORD115-7-201ENST00000365306 82 ntBASIC2.27□□□□□ -2.05
SRP54P61011 RNU6-195P-201ENST00000411352 109 ntBASIC2.27□□□□□ -2.05
SRP54P61011 DPH3P2-201ENST00000422618 250 ntBASIC2.27□□□□□ -2.05
SRP54P61011 RPL31P35-201ENST00000431058 377 ntBASIC2.27□□□□□ -2.05
SRP54P61011 RPS15AP28-201ENST00000435088 386 ntBASIC2.27□□□□□ -2.05
SRP54P61011 CALM1P1-201ENST00000442082 433 ntBASIC2.27□□□□□ -2.05
SRP54P61011 AC124916.1-201ENST00000444020 547 ntBASIC2.27□□□□□ -2.05
SRP54P61011 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC2.27□□□□□ -2.05
SRP54P61011 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC2.27□□□□□ -2.05
SRP54P61011 MTCYBP1-201ENST00000454315 1119 ntBASIC2.27□□□□□ -2.05
SRP54P61011 snoU109.2-201ENST00000459316 135 ntBASIC2.27□□□□□ -2.05
SRP54P61011 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC2.27□□□□□ -2.05
SRP54P61011 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
SRP54P61011 RPS29P21-201ENST00000496272 170 ntBASIC2.27□□□□□ -2.05
SRP54P61011 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC2.27□□□□□ -2.05
SRP54P61011 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC2.27□□□□□ -2.05
SRP54P61011 SNORA18.6-201ENST00000516792 115 ntBASIC2.27□□□□□ -2.05
SRP54P61011 AC109329.1-201ENST00000518744 317 ntBASIC2.27□□□□□ -2.05
SRP54P61011 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.27□□□□□ -2.05
SRP54P61011 AP002453.2-201ENST00000533503 320 ntBASIC2.27□□□□□ -2.05
SRP54P61011 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.27□□□□□ -2.05
SRP54P61011 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC2.27□□□□□ -2.05
SRP54P61011 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC2.27□□□□□ -2.05
SRP54P61011 AC009127.3-201ENST00000570531 403 ntBASIC2.27□□□□□ -2.05
SRP54P61011 RPS3AP23-202ENST00000574601 686 ntBASIC2.27□□□□□ -2.05
SRP54P61011 MIR1273D-201ENST00000577266 86 ntBASIC2.27□□□□□ -2.05
SRP54P61011 SEPT7P9-203ENST00000604116 343 ntBASIC2.27□□□□□ -2.05
SRP54P61011 AC064872.1-201ENST00000604823 1072 ntBASIC2.27□□□□□ -2.05
SRP54P61011 AC021646.1-201ENST00000605469 484 ntBASIC2.27□□□□□ -2.05
SRP54P61011 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC2.27□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 117.6 ms