Protein–RNA interactions for Protein: P60842

EIF4A1, Eukaryotic initiation factor 4A-I, humanhuman

Known RBP Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EIF4A1P60842 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.46□□□□□ -1.86
EIF4A1P60842 SNORA31.21-201ENST00000517180 77 ntBASIC3.46□□□□□ -1.86
EIF4A1P60842 RNA5SP291-201ENST00000517222 105 ntBASIC3.46□□□□□ -1.86
EIF4A1P60842 AC105029.1-201ENST00000520250 669 ntBASIC3.46□□□□□ -1.86
EIF4A1P60842 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.46□□□□□ -1.86
EIF4A1P60842 AC005668.1-201ENST00000571142 476 ntBASIC3.46□□□□□ -1.86
EIF4A1P60842 MIR3605-201ENST00000583214 100 ntBASIC3.46□□□□□ -1.86
EIF4A1P60842 MIR548AC-201ENST00000585049 88 ntBASIC3.46□□□□□ -1.86
EIF4A1P60842 AC073539.2-201ENST00000597113 165 ntBASIC3.46□□□□□ -1.86
EIF4A1P60842 AC012119.1-201ENST00000603184 222 ntBASIC3.46□□□□□ -1.86
EIF4A1P60842 DLEU2_6.1-201ENST00000610536 112 ntBASIC3.46□□□□□ -1.86
EIF4A1P60842 AC022140.2-201ENST00000623500 188 ntBASIC3.46□□□□□ -1.86
EIF4A1P60842 TPTEP1-208ENST00000636884 213 ntBASIC3.46□□□□□ -1.86
EIF4A1P60842 PSMD5-AS1-215ENST00000640622 205 ntBASIC3.46□□□□□ -1.86
EIF4A1P60842 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
EIF4A1P60842 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.46□□□□□ -1.86
EIF4A1P60842 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.46□□□□□ -1.86
EIF4A1P60842 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC3.46□□□□□ -1.86
EIF4A1P60842 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
EIF4A1P60842 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC3.45□□□□□ -1.86
EIF4A1P60842 RNU4-82P-201ENST00000362443 140 ntBASIC3.45□□□□□ -1.86
EIF4A1P60842 RNU6-1252P-201ENST00000363054 104 ntBASIC3.45□□□□□ -1.86
EIF4A1P60842 RNU4-73P-201ENST00000363164 141 ntBASIC3.45□□□□□ -1.86
EIF4A1P60842 SNORD113-7-201ENST00000363762 77 ntBASIC3.45□□□□□ -1.86
EIF4A1P60842 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.45□□□□□ -1.86
EIF4A1P60842 MIR325-201ENST00000385260 98 ntBASIC3.45□□□□□ -1.86
EIF4A1P60842 MIR301A-201ENST00000385261 86 ntBASIC3.45□□□□□ -1.86
EIF4A1P60842 RNU6-1197P-201ENST00000391183 107 ntBASIC3.45□□□□□ -1.86
EIF4A1P60842 RPS4XP3-201ENST00000398541 413 ntBASIC3.45□□□□□ -1.86
EIF4A1P60842 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.45□□□□□ -1.86
EIF4A1P60842 RPLP0P7-201ENST00000416050 667 ntBASIC3.45□□□□□ -1.86
EIF4A1P60842 NDUFA5P4-201ENST00000436704 385 ntBASIC3.45□□□□□ -1.86
EIF4A1P60842 Z82210.1-201ENST00000440037 231 ntBASIC3.45□□□□□ -1.86
EIF4A1P60842 AMD1P1-201ENST00000457220 922 ntBASIC3.45□□□□□ -1.86
EIF4A1P60842 PPP1R2P5-201ENST00000457256 603 ntBASIC3.45□□□□□ -1.86
EIF4A1P60842 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC3.45□□□□□ -1.86
EIF4A1P60842 FGF7P4-201ENST00000509595 295 ntBASIC3.45□□□□□ -1.86
EIF4A1P60842 RNU6-864P-201ENST00000516256 108 ntBASIC3.45□□□□□ -1.86
EIF4A1P60842 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC3.45□□□□□ -1.86
EIF4A1P60842 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC3.45□□□□□ -1.86
EIF4A1P60842 AP003122.3-201ENST00000526316 255 ntBASIC3.45□□□□□ -1.86
EIF4A1P60842 AC084851.1-201ENST00000529105 249 ntBASIC3.45□□□□□ -1.86
EIF4A1P60842 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC3.45□□□□□ -1.86
EIF4A1P60842 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC3.45□□□□□ -1.86
EIF4A1P60842 MIR5692A1-201ENST00000580523 69 ntBASIC3.45□□□□□ -1.86
EIF4A1P60842 MIR3942-201ENST00000585264 109 ntBASIC3.45□□□□□ -1.86
EIF4A1P60842 AC243960.4-201ENST00000600532 288 ntBASIC3.45□□□□□ -1.86
EIF4A1P60842 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC3.45□□□□□ -1.86
EIF4A1P60842 AC087045.1-201ENST00000605856 382 ntBASIC3.45□□□□□ -1.86
EIF4A1P60842 AL132765.2-201ENST00000610812 351 ntBASIC3.45□□□□□ -1.86
EIF4A1P60842 UBE2Q2P6-201ENST00000612666 153 ntBASIC3.45□□□□□ -1.86
EIF4A1P60842 MIR6076-201ENST00000617521 113 ntBASIC3.45□□□□□ -1.86
EIF4A1P60842 VPS8-228ENST00000628962 207 ntTSL 5 BASIC3.45□□□□□ -1.86
EIF4A1P60842 AL133216.2-202ENST00000634512 349 ntBASIC3.45□□□□□ -1.86
EIF4A1P60842 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
EIF4A1P60842 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
EIF4A1P60842 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
EIF4A1P60842 MTND5P19-201ENST00000424872 1794 ntBASIC3.44□□□□□ -1.86
EIF4A1P60842 RNA5SP68-201ENST00000363885 119 ntBASIC3.44□□□□□ -1.86
EIF4A1P60842 RNU6-694P-201ENST00000364071 147 ntBASIC3.44□□□□□ -1.86
EIF4A1P60842 RNA5SP126-201ENST00000365092 109 ntBASIC3.44□□□□□ -1.86
EIF4A1P60842 SNORA1.3-201ENST00000384676 136 ntBASIC3.44□□□□□ -1.86
EIF4A1P60842 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC3.44□□□□□ -1.86
EIF4A1P60842 AC092573.2-201ENST00000434546 243 ntBASIC3.44□□□□□ -1.86
EIF4A1P60842 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC3.44□□□□□ -1.86
EIF4A1P60842 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC3.44□□□□□ -1.86
EIF4A1P60842 HIGD1AP11-201ENST00000438361 280 ntBASIC3.44□□□□□ -1.86
EIF4A1P60842 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC3.44□□□□□ -1.86
EIF4A1P60842 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC3.44□□□□□ -1.86
EIF4A1P60842 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC3.44□□□□□ -1.86
EIF4A1P60842 CECR9-201ENST00000453421 199 ntBASIC3.44□□□□□ -1.86
EIF4A1P60842 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC3.44□□□□□ -1.86
EIF4A1P60842 AC006483.1-201ENST00000487308 313 ntBASIC3.44□□□□□ -1.86
EIF4A1P60842 RPL30P5-201ENST00000494923 336 ntBASIC3.44□□□□□ -1.86
EIF4A1P60842 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC3.44□□□□□ -1.86
EIF4A1P60842 SNORA19.2-201ENST00000516013 114 ntBASIC3.44□□□□□ -1.86
EIF4A1P60842 AL157871.3-201ENST00000557231 293 ntBASIC3.44□□□□□ -1.86
EIF4A1P60842 MIR1273C-201ENST00000578669 77 ntBASIC3.44□□□□□ -1.86
EIF4A1P60842 AL121757.2-201ENST00000611223 313 ntBASIC3.44□□□□□ -1.86
EIF4A1P60842 RMST_7.1-201ENST00000621935 268 ntBASIC3.44□□□□□ -1.86
EIF4A1P60842 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.44□□□□□ -1.86
EIF4A1P60842 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.44□□□□□ -1.86
EIF4A1P60842 AL359693.1-201ENST00000614959 2407 ntBASIC3.44□□□□□ -1.86
EIF4A1P60842 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
EIF4A1P60842 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.44□□□□□ -1.86
EIF4A1P60842 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
EIF4A1P60842 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
EIF4A1P60842 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.43□□□□□ -1.86
EIF4A1P60842 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.43□□□□□ -1.86
EIF4A1P60842 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
EIF4A1P60842 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
EIF4A1P60842 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.43□□□□□ -1.86
EIF4A1P60842 RNU6-1303P-201ENST00000364841 107 ntBASIC3.43□□□□□ -1.86
EIF4A1P60842 Y_RNA.301-201ENST00000364990 103 ntBASIC3.43□□□□□ -1.86
EIF4A1P60842 Y_RNA.509-201ENST00000384506 99 ntBASIC3.43□□□□□ -1.86
EIF4A1P60842 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC3.43□□□□□ -1.86
EIF4A1P60842 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.43□□□□□ -1.86
EIF4A1P60842 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.43□□□□□ -1.86
EIF4A1P60842 HMGB1P18-201ENST00000438801 619 ntBASIC3.43□□□□□ -1.86
EIF4A1P60842 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC3.43□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms