Protein–RNA interactions for Protein: P60709

ACTB, Actin, cytoplasmic 1, humanhuman

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTBP60709 AL670379.5-201ENST00000605253 252 ntBASIC1.31□□□□□ -2.2
ACTBP60709 AL670379.12-201ENST00000605291 253 ntBASIC1.31□□□□□ -2.2
ACTBP60709 AL670379.8-201ENST00000605353 252 ntBASIC1.31□□□□□ -2.2
ACTBP60709 AL670379.7-201ENST00000605823 252 ntBASIC1.31□□□□□ -2.2
ACTBP60709 RNU6-88P-201ENST00000606801 100 ntBASIC1.31□□□□□ -2.2
ACTBP60709 AC097468.3-201ENST00000607956 456 ntBASIC1.31□□□□□ -2.2
ACTBP60709 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
ACTBP60709 SNORD114-19-201ENST00000363072 75 ntBASIC1.3□□□□□ -2.2
ACTBP60709 RNU6-487P-201ENST00000365430 104 ntBASIC1.3□□□□□ -2.2
ACTBP60709 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC1.3□□□□□ -2.2
ACTBP60709 RNU6-611P-201ENST00000384276 104 ntBASIC1.3□□□□□ -2.2
ACTBP60709 Y_RNA.465-201ENST00000384293 102 ntBASIC1.3□□□□□ -2.2
ACTBP60709 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.3□□□□□ -2.2
ACTBP60709 AC119751.3-201ENST00000399720 670 ntBASIC1.3□□□□□ -2.2
ACTBP60709 RAC1P6-201ENST00000423911 575 ntBASIC1.3□□□□□ -2.2
ACTBP60709 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC1.3□□□□□ -2.2
ACTBP60709 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC1.3□□□□□ -2.2
ACTBP60709 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC1.3□□□□□ -2.2
ACTBP60709 SSXP1-201ENST00000453640 473 ntBASIC1.3□□□□□ -2.2
ACTBP60709 MTND1P3-201ENST00000484956 952 ntBASIC1.3□□□□□ -2.2
ACTBP60709 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC1.3□□□□□ -2.2
ACTBP60709 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
ACTBP60709 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC1.3□□□□□ -2.2
ACTBP60709 CLIC4P2-201ENST00000601934 717 ntBASIC1.3□□□□□ -2.2
ACTBP60709 AP001981.2-201ENST00000603241 418 ntBASIC1.3□□□□□ -2.2
ACTBP60709 AL132822.1-201ENST00000617063 513 ntBASIC1.3□□□□□ -2.2
ACTBP60709 AL512643.1-201ENST00000635735 524 ntBASIC1.3□□□□□ -2.2
ACTBP60709 AC006026.1-201ENST00000444025 1803 ntBASIC1.3□□□□□ -2.2
ACTBP60709 ZNF29P-201ENST00000225587 168 ntBASIC1.29□□□□□ -2.2
ACTBP60709 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
ACTBP60709 Y_RNA.140-201ENST00000363474 103 ntBASIC1.29□□□□□ -2.2
ACTBP60709 RNU6-288P-201ENST00000363690 104 ntBASIC1.29□□□□□ -2.2
ACTBP60709 SNORA4.3-201ENST00000365564 137 ntBASIC1.29□□□□□ -2.2
ACTBP60709 SMIM11P1-201ENST00000369586 178 ntBASIC1.29□□□□□ -2.2
ACTBP60709 SNORA75B-201ENST00000384053 137 ntBASIC1.29□□□□□ -2.2
ACTBP60709 RNU6-843P-201ENST00000384454 104 ntBASIC1.29□□□□□ -2.2
ACTBP60709 MIR186-201ENST00000384988 86 ntBASIC1.29□□□□□ -2.2
ACTBP60709 FCF1P10-201ENST00000407590 479 ntBASIC1.29□□□□□ -2.2
ACTBP60709 MIR1304-201ENST00000408243 91 ntBASIC1.29□□□□□ -2.2
ACTBP60709 MIR1262-201ENST00000408276 93 ntBASIC1.29□□□□□ -2.2
ACTBP60709 VPS26BP1-201ENST00000417155 755 ntBASIC1.29□□□□□ -2.2
ACTBP60709 CYCSP49-201ENST00000420810 319 ntBASIC1.29□□□□□ -2.2
ACTBP60709 AL358453.1-201ENST00000422522 250 ntBASIC1.29□□□□□ -2.2
ACTBP60709 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC1.29□□□□□ -2.2
ACTBP60709 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.29□□□□□ -2.2
ACTBP60709 MTND4P25-201ENST00000441039 533 ntBASIC1.29□□□□□ -2.2
ACTBP60709 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC1.29□□□□□ -2.2
ACTBP60709 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC1.29□□□□□ -2.2
ACTBP60709 ANKRD20A9P-201ENST00000457997 2978 ntBASIC1.29□□□□□ -2.2
ACTBP60709 MED28P2-201ENST00000475771 317 ntBASIC1.29□□□□□ -2.2
ACTBP60709 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC1.29□□□□□ -2.2
ACTBP60709 AC068587.4-201ENST00000533893 186 ntBASIC1.29□□□□□ -2.2
ACTBP60709 AP000763.2-201ENST00000540641 163 ntBASIC1.29□□□□□ -2.2
ACTBP60709 POC1B-211ENST00000549504 581 ntTSL 5 BASIC1.29□□□□□ -2.2
ACTBP60709 AL157871.3-201ENST00000557231 293 ntBASIC1.29□□□□□ -2.2
ACTBP60709 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC1.29□□□□□ -2.2
ACTBP60709 MIR3683-201ENST00000580847 82 ntBASIC1.29□□□□□ -2.2
ACTBP60709 MIR544B-201ENST00000582372 78 ntBASIC1.29□□□□□ -2.2
ACTBP60709 AC073410.2-201ENST00000603240 332 ntBASIC1.29□□□□□ -2.2
ACTBP60709 MTND3P19-201ENST00000603825 345 ntBASIC1.29□□□□□ -2.2
ACTBP60709 AC010900.2-201ENST00000604508 210 ntBASIC1.29□□□□□ -2.2
ACTBP60709 AC072039.2-201ENST00000608883 439 ntBASIC1.29□□□□□ -2.2
ACTBP60709 AL391813.2-201ENST00000609113 322 ntBASIC1.29□□□□□ -2.2
ACTBP60709 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.29□□□□□ -2.2
ACTBP60709 AC106858.1-201ENST00000637497 429 ntBASIC1.29□□□□□ -2.2
ACTBP60709 AC233981.2-201ENST00000611524 1614 ntBASIC1.29□□□□□ -2.2
ACTBP60709 RNU1-62P-201ENST00000362599 164 ntBASIC1.28□□□□□ -2.2
ACTBP60709 RNU6-433P-201ENST00000363216 104 ntBASIC1.28□□□□□ -2.2
ACTBP60709 SNORD14D-201ENST00000384390 87 ntBASIC1.28□□□□□ -2.2
ACTBP60709 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
ACTBP60709 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
ACTBP60709 RNU6-1025P-201ENST00000410629 104 ntBASIC1.28□□□□□ -2.2
ACTBP60709 PIGPP2-201ENST00000411569 458 ntBASIC1.28□□□□□ -2.2
ACTBP60709 RPL30P13-201ENST00000418873 348 ntBASIC1.28□□□□□ -2.2
ACTBP60709 RPS3AP37-201ENST00000419176 745 ntBASIC1.28□□□□□ -2.2
ACTBP60709 MTCO3P46-201ENST00000425787 232 ntBASIC1.28□□□□□ -2.2
ACTBP60709 SDAD1P3-201ENST00000427380 333 ntBASIC1.28□□□□□ -2.2
ACTBP60709 EEF1A1P39-201ENST00000440791 250 ntBASIC1.28□□□□□ -2.2
ACTBP60709 AC079448.1-201ENST00000449377 373 ntBASIC1.28□□□□□ -2.2
ACTBP60709 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC1.28□□□□□ -2.2
ACTBP60709 SNORD97-201ENST00000459187 142 ntBASIC1.28□□□□□ -2.2
ACTBP60709 AC104982.1-201ENST00000478775 574 ntBASIC1.28□□□□□ -2.2
ACTBP60709 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC1.28□□□□□ -2.2
ACTBP60709 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
ACTBP60709 RNU2-53P-201ENST00000516257 147 ntBASIC1.28□□□□□ -2.2
ACTBP60709 RNU6-914P-201ENST00000516749 109 ntBASIC1.28□□□□□ -2.2
ACTBP60709 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC1.28□□□□□ -2.2
ACTBP60709 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.28□□□□□ -2.2
ACTBP60709 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC1.28□□□□□ -2.2
ACTBP60709 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.28□□□□□ -2.2
ACTBP60709 MIR1273C-201ENST00000578669 77 ntBASIC1.28□□□□□ -2.2
ACTBP60709 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC1.28□□□□□ -2.2
ACTBP60709 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC1.28□□□□□ -2.2
ACTBP60709 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC1.28□□□□□ -2.2
ACTBP60709 AL022345.1-201ENST00000607292 135 ntBASIC1.28□□□□□ -2.2
ACTBP60709 MIR8074-201ENST00000615081 81 ntBASIC1.28□□□□□ -2.2
ACTBP60709 MIR7974-201ENST00000615835 79 ntBASIC1.28□□□□□ -2.2
ACTBP60709 AC091965.5-201ENST00000624785 342 ntBASIC1.28□□□□□ -2.2
ACTBP60709 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
ACTBP60709 HAUS6P2-201ENST00000433254 2404 ntBASIC1.28□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 94.5 ms