Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 AC004805.2-201ENST00000605382 482 ntBASIC2.4□□□□□ -2.03
HMGCS2P54868 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
HMGCS2P54868 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.4□□□□□ -2.03
HMGCS2P54868 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
HMGCS2P54868 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
HMGCS2P54868 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC2.39□□□□□ -2.03
HMGCS2P54868 ZBTB8OSP1-201ENST00000342688 498 ntBASIC2.39□□□□□ -2.03
HMGCS2P54868 VTRNA1-1-201ENST00000363120 99 ntBASIC2.39□□□□□ -2.03
HMGCS2P54868 SNORA4.3-201ENST00000365564 137 ntBASIC2.39□□□□□ -2.03
HMGCS2P54868 RNU1-138P-201ENST00000384093 164 ntBASIC2.39□□□□□ -2.03
HMGCS2P54868 RNA5SP213-201ENST00000391031 106 ntBASIC2.39□□□□□ -2.03
HMGCS2P54868 CD3D-202ENST00000392884 476 ntTSL 2 BASIC2.39□□□□□ -2.03
HMGCS2P54868 RNU6-1140P-201ENST00000410517 106 ntBASIC2.39□□□□□ -2.03
HMGCS2P54868 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC2.39□□□□□ -2.03
HMGCS2P54868 UBE2V1P10-201ENST00000414685 269 ntBASIC2.39□□□□□ -2.03
HMGCS2P54868 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC2.39□□□□□ -2.03
HMGCS2P54868 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
HMGCS2P54868 MTATP6P18-201ENST00000417994 673 ntBASIC2.39□□□□□ -2.03
HMGCS2P54868 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC2.39□□□□□ -2.03
HMGCS2P54868 AC073464.1-201ENST00000429823 534 ntBASIC2.39□□□□□ -2.03
HMGCS2P54868 HMGB1P27-201ENST00000431429 603 ntBASIC2.39□□□□□ -2.03
HMGCS2P54868 AL591212.2-201ENST00000433923 257 ntBASIC2.39□□□□□ -2.03
HMGCS2P54868 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC2.39□□□□□ -2.03
HMGCS2P54868 SNRPEP9-201ENST00000436794 238 ntBASIC2.39□□□□□ -2.03
HMGCS2P54868 RPS15AP7-201ENST00000439294 405 ntBASIC2.39□□□□□ -2.03
HMGCS2P54868 MTND4P25-201ENST00000441039 533 ntBASIC2.39□□□□□ -2.03
HMGCS2P54868 AC233279.1-201ENST00000455300 423 ntBASIC2.39□□□□□ -2.03
HMGCS2P54868 AC093899.1-201ENST00000457984 376 ntBASIC2.39□□□□□ -2.03
HMGCS2P54868 RNU6-953P-201ENST00000459154 107 ntBASIC2.39□□□□□ -2.03
HMGCS2P54868 AC107401.1-201ENST00000503426 685 ntBASIC2.39□□□□□ -2.03
HMGCS2P54868 AC109927.2-201ENST00000506416 303 ntBASIC2.39□□□□□ -2.03
HMGCS2P54868 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC2.39□□□□□ -2.03
HMGCS2P54868 AC098591.2-201ENST00000510152 315 ntBASIC2.39□□□□□ -2.03
HMGCS2P54868 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC2.39□□□□□ -2.03
HMGCS2P54868 MRPS36P2-201ENST00000512569 299 ntBASIC2.39□□□□□ -2.03
HMGCS2P54868 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC2.39□□□□□ -2.03
HMGCS2P54868 RNU6-914P-201ENST00000516749 109 ntBASIC2.39□□□□□ -2.03
HMGCS2P54868 RNU6-677P-201ENST00000516914 101 ntBASIC2.39□□□□□ -2.03
HMGCS2P54868 NTS-203ENST00000551529 801 ntTSL 3 BASIC2.39□□□□□ -2.03
HMGCS2P54868 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC2.39□□□□□ -2.03
HMGCS2P54868 AC245505.1-201ENST00000556398 224 ntBASIC2.39□□□□□ -2.03
HMGCS2P54868 OR1M4P-201ENST00000589199 287 ntBASIC2.39□□□□□ -2.03
HMGCS2P54868 MIR15A-201ENST00000607334 83 ntBASIC2.39□□□□□ -2.03
HMGCS2P54868 AC007684.1-201ENST00000609671 477 ntBASIC2.39□□□□□ -2.03
HMGCS2P54868 AC012409.4-201ENST00000612923 249 ntBASIC2.39□□□□□ -2.03
HMGCS2P54868 AP001486.3-201ENST00000615334 372 ntBASIC2.39□□□□□ -2.03
HMGCS2P54868 AC068792.1-201ENST00000621354 417 ntBASIC2.39□□□□□ -2.03
HMGCS2P54868 AC124864.2-201ENST00000624736 186 ntBASIC2.39□□□□□ -2.03
HMGCS2P54868 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
HMGCS2P54868 U2.21-201ENST00000637295 81 ntBASIC2.39□□□□□ -2.03
HMGCS2P54868 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.39□□□□□ -2.03
HMGCS2P54868 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
HMGCS2P54868 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.39□□□□□ -2.03
HMGCS2P54868 ZNF680P1-201ENST00000436625 1469 ntBASIC2.39□□□□□ -2.03
HMGCS2P54868 MTND5P17-201ENST00000418405 1603 ntBASIC2.39□□□□□ -2.03
HMGCS2P54868 AC135776.4-201ENST00000624300 1904 ntBASIC2.38□□□□□ -2.03
HMGCS2P54868 MIR6073-201ENST00000352083 89 ntBASIC2.38□□□□□ -2.03
HMGCS2P54868 Y_RNA.1-201ENST00000352915 104 ntBASIC2.38□□□□□ -2.03
HMGCS2P54868 SNORD115-7-201ENST00000365306 82 ntBASIC2.38□□□□□ -2.03
HMGCS2P54868 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC2.38□□□□□ -2.03
HMGCS2P54868 SNORA80E-201ENST00000384744 137 ntBASIC2.38□□□□□ -2.03
HMGCS2P54868 Y_RNA.576-201ENST00000384781 102 ntBASIC2.38□□□□□ -2.03
HMGCS2P54868 MIR583-201ENST00000384846 75 ntBASIC2.38□□□□□ -2.03
HMGCS2P54868 MIR454-201ENST00000390180 115 ntBASIC2.38□□□□□ -2.03
HMGCS2P54868 CALM2P3-201ENST00000400429 449 ntBASIC2.38□□□□□ -2.03
HMGCS2P54868 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
HMGCS2P54868 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC2.38□□□□□ -2.03
HMGCS2P54868 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
HMGCS2P54868 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC2.38□□□□□ -2.03
HMGCS2P54868 SKA2P1-201ENST00000425592 390 ntBASIC2.38□□□□□ -2.03
HMGCS2P54868 GPM6BP2-201ENST00000432046 144 ntBASIC2.38□□□□□ -2.03
HMGCS2P54868 AC002486.1-201ENST00000435098 391 ntBASIC2.38□□□□□ -2.03
HMGCS2P54868 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC2.38□□□□□ -2.03
HMGCS2P54868 GPM6BP1-201ENST00000446387 144 ntBASIC2.38□□□□□ -2.03
HMGCS2P54868 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC2.38□□□□□ -2.03
HMGCS2P54868 AP000705.1-201ENST00000454567 350 ntBASIC2.38□□□□□ -2.03
HMGCS2P54868 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.38□□□□□ -2.03
HMGCS2P54868 AC139453.3-201ENST00000493276 369 ntBASIC2.38□□□□□ -2.03
HMGCS2P54868 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC2.38□□□□□ -2.03
HMGCS2P54868 FAM92A1P2-202ENST00000504766 877 ntBASIC2.38□□□□□ -2.03
HMGCS2P54868 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
HMGCS2P54868 AC114786.4-201ENST00000508771 728 ntBASIC2.38□□□□□ -2.03
HMGCS2P54868 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC2.38□□□□□ -2.03
HMGCS2P54868 RNU6-123P-201ENST00000516163 102 ntBASIC2.38□□□□□ -2.03
HMGCS2P54868 RNU6-685P-201ENST00000517088 95 ntBASIC2.38□□□□□ -2.03
HMGCS2P54868 RNA5SP165-201ENST00000517142 115 ntBASIC2.38□□□□□ -2.03
HMGCS2P54868 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC2.38□□□□□ -2.03
HMGCS2P54868 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC2.38□□□□□ -2.03
HMGCS2P54868 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC2.38□□□□□ -2.03
HMGCS2P54868 UTP23-205ENST00000520733 369 ntTSL 3 BASIC2.38□□□□□ -2.03
HMGCS2P54868 AC022634.1-201ENST00000520765 532 ntBASIC2.38□□□□□ -2.03
HMGCS2P54868 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC2.38□□□□□ -2.03
HMGCS2P54868 AK6P1-201ENST00000540219 478 ntBASIC2.38□□□□□ -2.03
HMGCS2P54868 GLYCAM1-201ENST00000546596 285 ntBASIC2.38□□□□□ -2.03
HMGCS2P54868 AL359212.1-201ENST00000556608 614 ntBASIC2.38□□□□□ -2.03
HMGCS2P54868 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
HMGCS2P54868 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC2.38□□□□□ -2.03
HMGCS2P54868 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC2.38□□□□□ -2.03
HMGCS2P54868 AC017083.3-201ENST00000609955 700 ntBASIC2.38□□□□□ -2.03
HMGCS2P54868 TP73-AS1.1-201ENST00000611447 161 ntBASIC2.38□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 112.5 ms