Protein–RNA interactions for Protein: P52701

MSH6, DNA mismatch repair protein Msh6, humanhuman

Predictions only

Length 1,360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6P52701 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.09□□□□□ -2.08
MSH6P52701 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC2.09□□□□□ -2.08
MSH6P52701 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC2.09□□□□□ -2.08
MSH6P52701 MIR3118-1-201ENST00000581787 76 ntBASIC2.09□□□□□ -2.08
MSH6P52701 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.09□□□□□ -2.08
MSH6P52701 MIR3616-201ENST00000584070 92 ntBASIC2.09□□□□□ -2.08
MSH6P52701 AC234772.3-201ENST00000602277 528 ntBASIC2.09□□□□□ -2.08
MSH6P52701 AC007363.1-201ENST00000604736 620 ntBASIC2.09□□□□□ -2.08
MSH6P52701 AC135507.1-201ENST00000607214 561 ntBASIC2.09□□□□□ -2.08
MSH6P52701 HMGB1P24-202ENST00000615653 685 ntBASIC2.09□□□□□ -2.08
MSH6P52701 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC2.09□□□□□ -2.08
MSH6P52701 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC2.09□□□□□ -2.08
MSH6P52701 AC007671.2-201ENST00000637344 619 ntBASIC2.09□□□□□ -2.08
MSH6P52701 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.08
MSH6P52701 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
MSH6P52701 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.08□□□□□ -2.08
MSH6P52701 RNU1-22P-201ENST00000363334 158 ntBASIC2.08□□□□□ -2.08
MSH6P52701 RNU6-511P-201ENST00000363496 107 ntBASIC2.08□□□□□ -2.08
MSH6P52701 SNORD115.1-201ENST00000391109 76 ntBASIC2.08□□□□□ -2.08
MSH6P52701 XKRYP1-201ENST00000423438 492 ntBASIC2.08□□□□□ -2.08
MSH6P52701 SLC44A3-AS1-205ENST00000424505 612 ntBASIC2.08□□□□□ -2.08
MSH6P52701 AL354695.1-201ENST00000427935 228 ntBASIC2.08□□□□□ -2.08
MSH6P52701 MICF-203ENST00000432679 129 ntBASIC2.08□□□□□ -2.08
MSH6P52701 XKRYP2-201ENST00000432915 492 ntBASIC2.08□□□□□ -2.08
MSH6P52701 MTCYBP39-201ENST00000437562 491 ntBASIC2.08□□□□□ -2.08
MSH6P52701 NEFMP1-201ENST00000443423 1006 ntBASIC2.08□□□□□ -2.08
MSH6P52701 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC2.08□□□□□ -2.08
MSH6P52701 NDUFB4P2-201ENST00000509515 391 ntBASIC2.08□□□□□ -2.08
MSH6P52701 MIR514B-201ENST00000516774 80 ntBASIC2.08□□□□□ -2.08
MSH6P52701 SNORD19.2-201ENST00000516978 73 ntBASIC2.08□□□□□ -2.08
MSH6P52701 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC2.08□□□□□ -2.08
MSH6P52701 UTP23-205ENST00000520733 369 ntTSL 3 BASIC2.08□□□□□ -2.08
MSH6P52701 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC2.08□□□□□ -2.08
MSH6P52701 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC2.08□□□□□ -2.08
MSH6P52701 AC002400.1-201ENST00000569310 726 ntBASIC2.08□□□□□ -2.08
MSH6P52701 AL355598.1-201ENST00000604169 202 ntBASIC2.08□□□□□ -2.08
MSH6P52701 AC092192.1-201ENST00000633154 1018 ntBASIC2.08□□□□□ -2.08
MSH6P52701 AC006927.3-201ENST00000638789 384 ntBASIC2.08□□□□□ -2.08
MSH6P52701 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
MSH6P52701 AL354685.2-201ENST00000448218 1447 ntBASIC2.07□□□□□ -2.08
MSH6P52701 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC2.07□□□□□ -2.08
MSH6P52701 RNU5E-6P-201ENST00000365574 115 ntBASIC2.07□□□□□ -2.08
MSH6P52701 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC2.07□□□□□ -2.08
MSH6P52701 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC2.07□□□□□ -2.08
MSH6P52701 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC2.07□□□□□ -2.08
MSH6P52701 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC2.07□□□□□ -2.08
MSH6P52701 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC2.07□□□□□ -2.08
MSH6P52701 AL008629.1-201ENST00000438615 184 ntBASIC2.07□□□□□ -2.08
MSH6P52701 AL512286.1-201ENST00000439244 400 ntBASIC2.07□□□□□ -2.08
MSH6P52701 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC2.07□□□□□ -2.08
MSH6P52701 AC118469.1-201ENST00000442943 488 ntBASIC2.07□□□□□ -2.08
MSH6P52701 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC2.07□□□□□ -2.08
MSH6P52701 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC2.07□□□□□ -2.08
MSH6P52701 RNU7-26P-201ENST00000458980 63 ntBASIC2.07□□□□□ -2.08
MSH6P52701 AC092991.1-201ENST00000477176 376 ntBASIC2.07□□□□□ -2.08
MSH6P52701 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC2.07□□□□□ -2.08
MSH6P52701 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC2.07□□□□□ -2.08
MSH6P52701 PCMTD1P2-201ENST00000565017 355 ntBASIC2.07□□□□□ -2.08
MSH6P52701 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC2.07□□□□□ -2.08
MSH6P52701 AP000860.1-201ENST00000605250 559 ntBASIC2.07□□□□□ -2.08
MSH6P52701 AL365204.3-201ENST00000612448 685 ntBASIC2.07□□□□□ -2.08
MSH6P52701 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC2.07□□□□□ -2.08
MSH6P52701 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC2.07□□□□□ -2.08
MSH6P52701 AC092104.1-201ENST00000497346 1441 ntBASIC2.07□□□□□ -2.08
MSH6P52701 RNU6-288P-201ENST00000363690 104 ntBASIC2.06□□□□□ -2.08
MSH6P52701 RNU6-817P-201ENST00000391083 104 ntBASIC2.06□□□□□ -2.08
MSH6P52701 RNU2-36P-201ENST00000410361 191 ntBASIC2.06□□□□□ -2.08
MSH6P52701 RPS12P24-201ENST00000412619 387 ntBASIC2.06□□□□□ -2.08
MSH6P52701 SRIP3-201ENST00000413200 219 ntBASIC2.06□□□□□ -2.08
MSH6P52701 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC2.06□□□□□ -2.08
MSH6P52701 BRK1P2-201ENST00000442875 223 ntBASIC2.06□□□□□ -2.08
MSH6P52701 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC2.06□□□□□ -2.08
MSH6P52701 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC2.06□□□□□ -2.08
MSH6P52701 SNORA31.6-201ENST00000516241 130 ntBASIC2.06□□□□□ -2.08
MSH6P52701 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC2.06□□□□□ -2.08
MSH6P52701 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC2.06□□□□□ -2.08
MSH6P52701 MIR4285-201ENST00000581001 85 ntBASIC2.06□□□□□ -2.08
MSH6P52701 AP001981.2-201ENST00000603241 418 ntBASIC2.06□□□□□ -2.08
MSH6P52701 BNIP3P9-201ENST00000603714 553 ntBASIC2.06□□□□□ -2.08
MSH6P52701 AC091152.3-201ENST00000604227 325 ntBASIC2.06□□□□□ -2.08
MSH6P52701 AC121334.2-201ENST00000605387 271 ntBASIC2.06□□□□□ -2.08
MSH6P52701 AC011939.3-201ENST00000613686 466 ntBASIC2.06□□□□□ -2.08
MSH6P52701 AL031601.2-202ENST00000622650 282 ntBASIC2.06□□□□□ -2.08
MSH6P52701 FRG1KP-201ENST00000623592 341 ntBASIC2.06□□□□□ -2.08
MSH6P52701 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.06□□□□□ -2.08
MSH6P52701 CENPCP1-201ENST00000533085 2578 ntBASIC2.06□□□□□ -2.08
MSH6P52701 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
MSH6P52701 MTND4P27-201ENST00000450813 1354 ntBASIC2.06□□□□□ -2.08
MSH6P52701 AL445523.1-201ENST00000451184 1362 ntBASIC2.06□□□□□ -2.08
MSH6P52701 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
MSH6P52701 RNU6-960P-201ENST00000364056 120 ntBASIC2.05□□□□□ -2.08
MSH6P52701 RNU6-501P-201ENST00000364072 100 ntBASIC2.05□□□□□ -2.08
MSH6P52701 RNY4P16-201ENST00000364768 94 ntBASIC2.05□□□□□ -2.08
MSH6P52701 SMIM11P1-201ENST00000369586 178 ntBASIC2.05□□□□□ -2.08
MSH6P52701 RNU6-1083P-201ENST00000384022 107 ntBASIC2.05□□□□□ -2.08
MSH6P52701 RNU6-809P-201ENST00000384461 107 ntBASIC2.05□□□□□ -2.08
MSH6P52701 RNU6-658P-201ENST00000384606 106 ntBASIC2.05□□□□□ -2.08
MSH6P52701 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC2.05□□□□□ -2.08
MSH6P52701 AL593851.1-201ENST00000426171 157 ntBASIC2.05□□□□□ -2.08
MSH6P52701 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC2.05□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 109 ms