Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 U3.15-201ENST00000365398 212 ntBASIC4.47□□□□□ -1.69
USP11P51784 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
USP11P51784 MIR134-201ENST00000385258 73 ntBASIC4.47□□□□□ -1.69
USP11P51784 RN7SKP51-201ENST00000410781 304 ntBASIC4.47□□□□□ -1.69
USP11P51784 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC4.47□□□□□ -1.69
USP11P51784 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC4.47□□□□□ -1.69
USP11P51784 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC4.47□□□□□ -1.69
USP11P51784 HSPE1P25-201ENST00000455484 251 ntBASIC4.47□□□□□ -1.69
USP11P51784 SNRPGP5-201ENST00000456003 220 ntBASIC4.47□□□□□ -1.69
USP11P51784 AC091153.1-201ENST00000466297 402 ntBASIC4.47□□□□□ -1.69
USP11P51784 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC4.47□□□□□ -1.69
USP11P51784 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC4.47□□□□□ -1.69
USP11P51784 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC4.47□□□□□ -1.69
USP11P51784 RNU4ATAC6P-201ENST00000516592 126 ntBASIC4.47□□□□□ -1.69
USP11P51784 RNU6-143P-201ENST00000516942 93 ntBASIC4.47□□□□□ -1.69
USP11P51784 RNU4-60P-201ENST00000517239 135 ntBASIC4.47□□□□□ -1.69
USP11P51784 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
USP11P51784 MRPS36P4-201ENST00000534436 298 ntBASIC4.47□□□□□ -1.69
USP11P51784 MDM2-232ENST00000544561 213 ntTSL 5 BASIC4.47□□□□□ -1.69
USP11P51784 MIR548AI-201ENST00000579940 88 ntBASIC4.47□□□□□ -1.69
USP11P51784 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC4.47□□□□□ -1.69
USP11P51784 HAUS6P2-201ENST00000433254 2404 ntBASIC4.47□□□□□ -1.69
USP11P51784 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
USP11P51784 AL136964.1-201ENST00000622038 2990 ntBASIC4.47□□□□□ -1.69
USP11P51784 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
USP11P51784 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.46□□□□□ -1.69
USP11P51784 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
USP11P51784 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
USP11P51784 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
USP11P51784 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC4.46□□□□□ -1.7
USP11P51784 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
USP11P51784 RNU6-1167P-201ENST00000363227 94 ntBASIC4.46□□□□□ -1.7
USP11P51784 SNORD14B-201ENST00000364533 90 ntBASIC4.46□□□□□ -1.7
USP11P51784 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC4.46□□□□□ -1.7
USP11P51784 AC011742.1-201ENST00000431448 434 ntBASIC4.46□□□□□ -1.7
USP11P51784 AC007389.2-201ENST00000434630 306 ntBASIC4.46□□□□□ -1.7
USP11P51784 HSPE1P6-201ENST00000479457 291 ntBASIC4.46□□□□□ -1.7
USP11P51784 RNU6-1278P-201ENST00000516130 107 ntBASIC4.46□□□□□ -1.7
USP11P51784 AC005255.1-201ENST00000593748 216 ntBASIC4.46□□□□□ -1.7
USP11P51784 AL161629.2-201ENST00000615347 275 ntBASIC4.46□□□□□ -1.7
USP11P51784 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
USP11P51784 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
USP11P51784 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
USP11P51784 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.46□□□□□ -1.7
USP11P51784 AC018555.1-201ENST00000567548 1980 ntBASIC4.45□□□□□ -1.7
USP11P51784 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
USP11P51784 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
USP11P51784 RNU6-428P-201ENST00000362942 107 ntBASIC4.45□□□□□ -1.7
USP11P51784 Y_RNA.122-201ENST00000363331 96 ntBASIC4.45□□□□□ -1.7
USP11P51784 RNU6-704P-201ENST00000364162 103 ntBASIC4.45□□□□□ -1.7
USP11P51784 AL451074.5-201ENST00000415894 435 ntBASIC4.45□□□□□ -1.7
USP11P51784 AC091390.3-201ENST00000426478 338 ntBASIC4.45□□□□□ -1.7
USP11P51784 RN7SL132P-201ENST00000478131 296 ntBASIC4.45□□□□□ -1.7
USP11P51784 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC4.45□□□□□ -1.7
USP11P51784 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC4.45□□□□□ -1.7
USP11P51784 BRDTP1-201ENST00000605735 677 ntBASIC4.45□□□□□ -1.7
USP11P51784 AC005046.1-201ENST00000608515 625 ntBASIC4.45□□□□□ -1.7
USP11P51784 AC004832.4-201ENST00000608952 331 ntBASIC4.45□□□□□ -1.7
USP11P51784 AL590240.4-201ENST00000616908 390 ntBASIC4.45□□□□□ -1.7
USP11P51784 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC4.45□□□□□ -1.7
USP11P51784 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.45□□□□□ -1.7
USP11P51784 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
USP11P51784 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
USP11P51784 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
USP11P51784 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC4.45□□□□□ -1.7
USP11P51784 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
USP11P51784 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC4.44□□□□□ -1.7
USP11P51784 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
USP11P51784 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC4.44□□□□□ -1.7
USP11P51784 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC4.44□□□□□ -1.7
USP11P51784 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.44□□□□□ -1.7
USP11P51784 PTER-201ENST00000298942 3448 ntTSL 5 BASIC4.44□□□□□ -1.7
USP11P51784 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
USP11P51784 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC4.44□□□□□ -1.7
USP11P51784 MIR412-201ENST00000362142 91 ntBASIC4.44□□□□□ -1.7
USP11P51784 RNA5SP97-201ENST00000365006 84 ntBASIC4.44□□□□□ -1.7
USP11P51784 RNU6-290P-201ENST00000365212 101 ntBASIC4.44□□□□□ -1.7
USP11P51784 RNY1P5-201ENST00000383890 115 ntBASIC4.44□□□□□ -1.7
USP11P51784 MIR613-201ENST00000385248 95 ntBASIC4.44□□□□□ -1.7
USP11P51784 RNU6-651P-201ENST00000411040 105 ntBASIC4.44□□□□□ -1.7
USP11P51784 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC4.44□□□□□ -1.7
USP11P51784 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC4.44□□□□□ -1.7
USP11P51784 AC079780.1-201ENST00000428259 207 ntBASIC4.44□□□□□ -1.7
USP11P51784 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC4.44□□□□□ -1.7
USP11P51784 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC4.44□□□□□ -1.7
USP11P51784 RPL21P129-201ENST00000491732 478 ntBASIC4.44□□□□□ -1.7
USP11P51784 RPL7P47-201ENST00000497299 556 ntBASIC4.44□□□□□ -1.7
USP11P51784 ANXA2P1-201ENST00000505539 926 ntBASIC4.44□□□□□ -1.7
USP11P51784 AK3P2-201ENST00000507976 429 ntBASIC4.44□□□□□ -1.7
USP11P51784 SNORD116-28-201ENST00000516123 91 ntBASIC4.44□□□□□ -1.7
USP11P51784 IGKV3OR22-2-201ENST00000517943 313 ntBASIC4.44□□□□□ -1.7
USP11P51784 UTP23-205ENST00000520733 369 ntTSL 3 BASIC4.44□□□□□ -1.7
USP11P51784 CASP1P1-201ENST00000526345 212 ntBASIC4.44□□□□□ -1.7
USP11P51784 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC4.44□□□□□ -1.7
USP11P51784 RN7SL703P-201ENST00000578485 302 ntBASIC4.44□□□□□ -1.7
USP11P51784 MIR4659A-201ENST00000580269 81 ntBASIC4.44□□□□□ -1.7
USP11P51784 AC011921.3-201ENST00000605540 361 ntBASIC4.44□□□□□ -1.7
USP11P51784 AC107294.1-201ENST00000609524 467 ntBASIC4.44□□□□□ -1.7
USP11P51784 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.44□□□□□ -1.7
USP11P51784 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 106.7 ms