Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC4.54□□□□□ -1.68
RNF144AP50876 snoU13.4-201ENST00000458916 104 ntBASIC4.54□□□□□ -1.68
RNF144AP50876 RNU6ATAC24P-201ENST00000516811 135 ntBASIC4.54□□□□□ -1.68
RNF144AP50876 AL354798.1-201ENST00000622505 329 ntBASIC4.54□□□□□ -1.68
RNF144AP50876 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
RNF144AP50876 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
RNF144AP50876 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
RNF144AP50876 AC134026.1-201ENST00000623249 2239 ntBASIC4.54□□□□□ -1.68
RNF144AP50876 AC010329.5-201ENST00000623497 2174 ntBASIC4.54□□□□□ -1.68
RNF144AP50876 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
RNF144AP50876 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
RNF144AP50876 AC126323.6-202ENST00000568092 3511 ntBASIC4.54□□□□□ -1.68
RNF144AP50876 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
RNF144AP50876 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC4.53□□□□□ -1.68
RNF144AP50876 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
RNF144AP50876 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
RNF144AP50876 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
RNF144AP50876 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
RNF144AP50876 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC4.53□□□□□ -1.68
RNF144AP50876 AF127577.6-201ENST00000623352 2191 ntBASIC4.53□□□□□ -1.68
RNF144AP50876 RNA5SP123-201ENST00000363244 119 ntBASIC4.53□□□□□ -1.68
RNF144AP50876 Y_RNA.287-201ENST00000364853 94 ntBASIC4.53□□□□□ -1.68
RNF144AP50876 Y_RNA.572-201ENST00000384757 98 ntBASIC4.53□□□□□ -1.68
RNF144AP50876 FTH1P15-201ENST00000406984 280 ntBASIC4.53□□□□□ -1.68
RNF144AP50876 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
RNF144AP50876 AL121914.1-201ENST00000450188 156 ntBASIC4.53□□□□□ -1.68
RNF144AP50876 RNU7-107P-201ENST00000459121 61 ntBASIC4.53□□□□□ -1.68
RNF144AP50876 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC4.53□□□□□ -1.68
RNF144AP50876 HMGB1P22-201ENST00000505315 124 ntBASIC4.53□□□□□ -1.68
RNF144AP50876 RNU6-453P-201ENST00000516819 85 ntBASIC4.53□□□□□ -1.68
RNF144AP50876 RNA5SP392-201ENST00000516905 112 ntBASIC4.53□□□□□ -1.68
RNF144AP50876 Y_RNA.709-201ENST00000516952 92 ntBASIC4.53□□□□□ -1.68
RNF144AP50876 AP001328.1-201ENST00000528550 176 ntBASIC4.53□□□□□ -1.68
RNF144AP50876 NACAP3-201ENST00000552100 481 ntBASIC4.53□□□□□ -1.68
RNF144AP50876 MIR3613-201ENST00000579844 87 ntBASIC4.53□□□□□ -1.68
RNF144AP50876 AC007448.1-201ENST00000582714 234 ntBASIC4.53□□□□□ -1.68
RNF144AP50876 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC4.53□□□□□ -1.68
RNF144AP50876 AC024940.4-201ENST00000605507 246 ntBASIC4.53□□□□□ -1.68
RNF144AP50876 TEX41-243ENST00000614173 190 ntTSL 5 BASIC4.53□□□□□ -1.68
RNF144AP50876 AC083809.1-201ENST00000615051 472 ntBASIC4.53□□□□□ -1.68
RNF144AP50876 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
RNF144AP50876 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.53□□□□□ -1.68
RNF144AP50876 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
RNF144AP50876 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
RNF144AP50876 AC139713.2-214ENST00000642059 1811 ntBASIC4.53□□□□□ -1.68
RNF144AP50876 AC107068.1-201ENST00000563286 4218 ntBASIC4.53□□□□□ -1.68
RNF144AP50876 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.53□□□□□ -1.68
RNF144AP50876 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
RNF144AP50876 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
RNF144AP50876 MAPK10-320ENST00000641462 6696 ntBASIC4.53□□□□□ -1.69
RNF144AP50876 SALL4P2-201ENST00000423288 2910 ntBASIC4.52□□□□□ -1.69
RNF144AP50876 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.52□□□□□ -1.69
RNF144AP50876 DHX9P1-201ENST00000436565 3076 ntBASIC4.52□□□□□ -1.69
RNF144AP50876 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
RNF144AP50876 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
RNF144AP50876 RNA5SP507-201ENST00000363603 121 ntBASIC4.52□□□□□ -1.69
RNF144AP50876 TOMM22P1-201ENST00000418578 312 ntBASIC4.52□□□□□ -1.69
RNF144AP50876 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC4.52□□□□□ -1.69
RNF144AP50876 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC4.52□□□□□ -1.69
RNF144AP50876 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC4.52□□□□□ -1.69
RNF144AP50876 AC000111.2-201ENST00000448200 210 ntBASIC4.52□□□□□ -1.69
RNF144AP50876 AC073850.1-201ENST00000449243 255 ntBASIC4.52□□□□□ -1.69
RNF144AP50876 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC4.52□□□□□ -1.69
RNF144AP50876 AC007215.1-201ENST00000464893 276 ntBASIC4.52□□□□□ -1.69
RNF144AP50876 AC092991.1-201ENST00000477176 376 ntBASIC4.52□□□□□ -1.69
RNF144AP50876 RPS4XP13-201ENST00000483219 789 ntBASIC4.52□□□□□ -1.69
RNF144AP50876 SCARNA8-201ENST00000515924 131 ntBASIC4.52□□□□□ -1.69
RNF144AP50876 RNU2-12P-201ENST00000517216 168 ntBASIC4.52□□□□□ -1.69
RNF144AP50876 SNORA31.23-201ENST00000517219 133 ntBASIC4.52□□□□□ -1.69
RNF144AP50876 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
RNF144AP50876 SNRPGP15-201ENST00000600149 222 ntBASIC4.52□□□□□ -1.69
RNF144AP50876 AL391813.1-201ENST00000603098 260 ntBASIC4.52□□□□□ -1.69
RNF144AP50876 AC211433.2-201ENST00000608433 387 ntBASIC4.52□□□□□ -1.69
RNF144AP50876 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC4.52□□□□□ -1.69
RNF144AP50876 FTX_3.1-201ENST00000610451 147 ntBASIC4.52□□□□□ -1.69
RNF144AP50876 MIR6134-201ENST00000617606 109 ntBASIC4.52□□□□□ -1.69
RNF144AP50876 AP001340.1-201ENST00000624405 217 ntBASIC4.52□□□□□ -1.69
RNF144AP50876 CCT5-215ENST00000625723 135 ntTSL 5 BASIC4.52□□□□□ -1.69
RNF144AP50876 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
RNF144AP50876 AC027290.2-201ENST00000623210 18662 ntBASIC4.52□□□□□ -1.69
RNF144AP50876 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.52□□□□□ -1.69
RNF144AP50876 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
RNF144AP50876 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
RNF144AP50876 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
RNF144AP50876 AL133243.3-201ENST00000617415 3004 ntBASIC4.51□□□□□ -1.69
RNF144AP50876 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.51□□□□□ -1.69
RNF144AP50876 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
RNF144AP50876 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC4.51□□□□□ -1.69
RNF144AP50876 AL133383.2-201ENST00000622958 2336 ntBASIC4.51□□□□□ -1.69
RNF144AP50876 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC4.51□□□□□ -1.69
RNF144AP50876 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
RNF144AP50876 RNA5SP267-201ENST00000364893 126 ntBASIC4.51□□□□□ -1.69
RNF144AP50876 RNU6-1180P-201ENST00000364935 107 ntBASIC4.51□□□□□ -1.69
RNF144AP50876 RNU6-407P-201ENST00000365280 104 ntBASIC4.51□□□□□ -1.69
RNF144AP50876 RNU1-73P-201ENST00000383971 164 ntBASIC4.51□□□□□ -1.69
RNF144AP50876 RNU6-1181P-201ENST00000384191 106 ntBASIC4.51□□□□□ -1.69
RNF144AP50876 RNU6-1144P-201ENST00000384247 104 ntBASIC4.51□□□□□ -1.69
RNF144AP50876 Y_RNA.525-201ENST00000384570 113 ntBASIC4.51□□□□□ -1.69
RNF144AP50876 SPTLC1P2-201ENST00000407089 121 ntBASIC4.51□□□□□ -1.69
RNF144AP50876 RN7SKP213-201ENST00000410746 298 ntBASIC4.51□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 113.2 ms