Protein–RNA interactions for Protein: P48061

CXCL12, Stromal cell-derived factor 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12P48061 AC091152.3-201ENST00000604227 325 ntBASIC1.77□□□□□ -2.13
CXCL12P48061 AC112191.3-201ENST00000604371 277 ntBASIC1.77□□□□□ -2.13
CXCL12P48061 AC122133.1-201ENST00000613964 233 ntBASIC1.77□□□□□ -2.13
CXCL12P48061 AC091304.6-201ENST00000619761 202 ntBASIC1.77□□□□□ -2.13
CXCL12P48061 AC099654.13-201ENST00000639774 207 ntBASIC1.77□□□□□ -2.13
CXCL12P48061 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.77□□□□□ -2.13
CXCL12P48061 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC1.76□□□□□ -2.13
CXCL12P48061 RNU5E-1-201ENST00000362477 120 ntBASIC1.76□□□□□ -2.13
CXCL12P48061 Y_RNA.122-201ENST00000363331 96 ntBASIC1.76□□□□□ -2.13
CXCL12P48061 RNU6-39P-201ENST00000384344 107 ntBASIC1.76□□□□□ -2.13
CXCL12P48061 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC1.76□□□□□ -2.13
CXCL12P48061 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC1.76□□□□□ -2.13
CXCL12P48061 AC119618.1-201ENST00000434191 222 ntBASIC1.76□□□□□ -2.13
CXCL12P48061 MTND1P30-201ENST00000441241 901 ntBASIC1.76□□□□□ -2.13
CXCL12P48061 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC1.76□□□□□ -2.13
CXCL12P48061 BRK1P2-201ENST00000442875 223 ntBASIC1.76□□□□□ -2.13
CXCL12P48061 AC092001.1-201ENST00000453012 261 ntBASIC1.76□□□□□ -2.13
CXCL12P48061 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC1.76□□□□□ -2.13
CXCL12P48061 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC1.76□□□□□ -2.13
CXCL12P48061 RNU7-51P-201ENST00000516560 62 ntBASIC1.76□□□□□ -2.13
CXCL12P48061 Y_RNA.689-201ENST00000516589 107 ntBASIC1.76□□□□□ -2.13
CXCL12P48061 AC022878.1-201ENST00000530684 149 ntBASIC1.76□□□□□ -2.13
CXCL12P48061 OR5B19P-201ENST00000531766 928 ntBASIC1.76□□□□□ -2.13
CXCL12P48061 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC1.76□□□□□ -2.13
CXCL12P48061 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC1.76□□□□□ -2.13
CXCL12P48061 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC1.76□□□□□ -2.13
CXCL12P48061 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC1.76□□□□□ -2.13
CXCL12P48061 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC1.76□□□□□ -2.13
CXCL12P48061 AC023824.2-201ENST00000566185 400 ntBASIC1.76□□□□□ -2.13
CXCL12P48061 AC012065.4-201ENST00000602445 679 ntBASIC1.76□□□□□ -2.13
CXCL12P48061 AC008121.1-201ENST00000603244 268 ntBASIC1.76□□□□□ -2.13
CXCL12P48061 AC092354.1-201ENST00000606057 376 ntBASIC1.76□□□□□ -2.13
CXCL12P48061 AP002360.4-201ENST00000606980 481 ntBASIC1.76□□□□□ -2.13
CXCL12P48061 AC135507.1-201ENST00000607214 561 ntBASIC1.76□□□□□ -2.13
CXCL12P48061 AC063944.3-201ENST00000609969 533 ntBASIC1.76□□□□□ -2.13
CXCL12P48061 AC007494.3-201ENST00000624660 743 ntBASIC1.76□□□□□ -2.13
CXCL12P48061 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
CXCL12P48061 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC1.76□□□□□ -2.13
CXCL12P48061 ZNF720P1-201ENST00000562403 1939 ntBASIC1.76□□□□□ -2.13
CXCL12P48061 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
CXCL12P48061 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC1.75□□□□□ -2.13
CXCL12P48061 RNU6-1083P-201ENST00000384022 107 ntBASIC1.75□□□□□ -2.13
CXCL12P48061 RNU6-190P-201ENST00000384154 102 ntBASIC1.75□□□□□ -2.13
CXCL12P48061 RNU4-52P-201ENST00000384209 138 ntBASIC1.75□□□□□ -2.13
CXCL12P48061 MIR218-1-201ENST00000384999 110 ntBASIC1.75□□□□□ -2.13
CXCL12P48061 MRPL42P2-201ENST00000403169 426 ntBASIC1.75□□□□□ -2.13
CXCL12P48061 HMGB3P2-201ENST00000411913 584 ntBASIC1.75□□□□□ -2.13
CXCL12P48061 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC1.75□□□□□ -2.13
CXCL12P48061 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC1.75□□□□□ -2.13
CXCL12P48061 AL365203.2-201ENST00000423444 196 ntBASIC1.75□□□□□ -2.13
CXCL12P48061 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC1.75□□□□□ -2.13
CXCL12P48061 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC1.75□□□□□ -2.13
CXCL12P48061 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC1.75□□□□□ -2.13
CXCL12P48061 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC1.75□□□□□ -2.13
CXCL12P48061 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC1.75□□□□□ -2.13
CXCL12P48061 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC1.75□□□□□ -2.13
CXCL12P48061 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC1.75□□□□□ -2.13
CXCL12P48061 RPL36AP21-201ENST00000490372 323 ntBASIC1.75□□□□□ -2.13
CXCL12P48061 AC022493.1-201ENST00000492984 337 ntBASIC1.75□□□□□ -2.13
CXCL12P48061 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC1.75□□□□□ -2.13
CXCL12P48061 AC109927.2-201ENST00000506416 303 ntBASIC1.75□□□□□ -2.13
CXCL12P48061 RNU6-572P-201ENST00000516724 80 ntBASIC1.75□□□□□ -2.13
CXCL12P48061 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC1.75□□□□□ -2.13
CXCL12P48061 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC1.75□□□□□ -2.13
CXCL12P48061 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.75□□□□□ -2.13
CXCL12P48061 RPL21P5-201ENST00000554662 472 ntBASIC1.75□□□□□ -2.13
CXCL12P48061 MIR3915-201ENST00000578518 97 ntBASIC1.75□□□□□ -2.13
CXCL12P48061 MIR15A-201ENST00000607334 83 ntBASIC1.75□□□□□ -2.13
CXCL12P48061 AL359851.1-201ENST00000569460 4997 ntBASIC1.74□□□□□ -2.13
CXCL12P48061 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
CXCL12P48061 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.74□□□□□ -2.13
CXCL12P48061 HSPE1P11-201ENST00000339579 310 ntBASIC1.74□□□□□ -2.13
CXCL12P48061 SNORA16.1-201ENST00000364597 132 ntBASIC1.74□□□□□ -2.13
CXCL12P48061 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC1.74□□□□□ -2.13
CXCL12P48061 MIR301A-201ENST00000385261 86 ntBASIC1.74□□□□□ -2.13
CXCL12P48061 RNU6-220P-201ENST00000390919 107 ntBASIC1.74□□□□□ -2.13
CXCL12P48061 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
CXCL12P48061 SNORD23.1-201ENST00000408212 104 ntBASIC1.74□□□□□ -2.13
CXCL12P48061 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC1.74□□□□□ -2.13
CXCL12P48061 AC114491.1-201ENST00000416095 246 ntBASIC1.74□□□□□ -2.13
CXCL12P48061 AL109913.1-201ENST00000421173 514 ntBASIC1.74□□□□□ -2.13
CXCL12P48061 RPL23AP30-201ENST00000432419 501 ntBASIC1.74□□□□□ -2.13
CXCL12P48061 AL591704.1-201ENST00000432574 275 ntBASIC1.74□□□□□ -2.13
CXCL12P48061 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC1.74□□□□□ -2.13
CXCL12P48061 DNAJC19P4-201ENST00000440115 345 ntBASIC1.74□□□□□ -2.13
CXCL12P48061 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC1.74□□□□□ -2.13
CXCL12P48061 RPL23AP7-203ENST00000449021 469 ntBASIC1.74□□□□□ -2.13
CXCL12P48061 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC1.74□□□□□ -2.13
CXCL12P48061 AC026801.1-201ENST00000497178 464 ntBASIC1.74□□□□□ -2.13
CXCL12P48061 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC1.74□□□□□ -2.13
CXCL12P48061 MTND1P22-201ENST00000510572 951 ntBASIC1.74□□□□□ -2.13
CXCL12P48061 FABP5P5-201ENST00000515537 406 ntBASIC1.74□□□□□ -2.13
CXCL12P48061 SNORD19.2-201ENST00000516978 73 ntBASIC1.74□□□□□ -2.13
CXCL12P48061 SNORA31.19-201ENST00000517079 126 ntBASIC1.74□□□□□ -2.13
CXCL12P48061 RNU6-1220P-201ENST00000517126 108 ntBASIC1.74□□□□□ -2.13
CXCL12P48061 RNU6-1315P-201ENST00000517187 99 ntBASIC1.74□□□□□ -2.13
CXCL12P48061 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC1.74□□□□□ -2.13
CXCL12P48061 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC1.74□□□□□ -2.13
CXCL12P48061 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC1.74□□□□□ -2.13
CXCL12P48061 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC1.74□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 123.1 ms