Protein–RNA interactions for Protein: P47902

CDX1, Homeobox protein CDX-1, humanhuman

Predicted RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1P47902 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.4□□□□□ -2.03
CDX1P47902 FDX1P2-201ENST00000450769 375 ntBASIC2.4□□□□□ -2.03
CDX1P47902 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC2.4□□□□□ -2.03
CDX1P47902 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC2.4□□□□□ -2.03
CDX1P47902 AC011825.1-201ENST00000484967 388 ntBASIC2.4□□□□□ -2.03
CDX1P47902 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC2.4□□□□□ -2.03
CDX1P47902 AC009646.1-201ENST00000510455 318 ntBASIC2.4□□□□□ -2.03
CDX1P47902 TBCAP3-201ENST00000512475 312 ntBASIC2.4□□□□□ -2.03
CDX1P47902 AC008885.1-201ENST00000514930 301 ntBASIC2.4□□□□□ -2.03
CDX1P47902 RNA5SP401-201ENST00000515920 127 ntBASIC2.4□□□□□ -2.03
CDX1P47902 RNU4ATAC8P-201ENST00000516196 109 ntBASIC2.4□□□□□ -2.03
CDX1P47902 SNORA40.12-201ENST00000516329 111 ntBASIC2.4□□□□□ -2.03
CDX1P47902 RN7SKP272-201ENST00000516988 232 ntBASIC2.4□□□□□ -2.03
CDX1P47902 MDM2-233ENST00000545204 398 ntTSL 5 BASIC2.4□□□□□ -2.03
CDX1P47902 AC079598.5-201ENST00000547460 117 ntBASIC2.4□□□□□ -2.03
CDX1P47902 AC027807.1-201ENST00000559921 996 ntBASIC2.4□□□□□ -2.03
CDX1P47902 AC023824.2-201ENST00000566185 400 ntBASIC2.4□□□□□ -2.03
CDX1P47902 AC105137.2-201ENST00000569073 466 ntBASIC2.4□□□□□ -2.03
CDX1P47902 AC105245.1-201ENST00000581934 244 ntBASIC2.4□□□□□ -2.03
CDX1P47902 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
CDX1P47902 RNU6-6P-201ENST00000606623 107 ntBASIC2.4□□□□□ -2.03
CDX1P47902 AC093788.1-201ENST00000609356 927 ntBASIC2.4□□□□□ -2.03
CDX1P47902 AL449363.1-201ENST00000617815 186 ntBASIC2.4□□□□□ -2.03
CDX1P47902 AL359880.1-201ENST00000621879 266 ntBASIC2.4□□□□□ -2.03
CDX1P47902 RMST_7.1-201ENST00000621935 268 ntBASIC2.4□□□□□ -2.03
CDX1P47902 AC244517.12-201ENST00000623581 663 ntBASIC2.4□□□□□ -2.03
CDX1P47902 AC010297.1-201ENST00000623948 149 ntBASIC2.4□□□□□ -2.03
CDX1P47902 AL161431.1-201ENST00000618966 4205 ntBASIC2.4□□□□□ -2.03
CDX1P47902 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.4□□□□□ -2.03
CDX1P47902 AC135776.4-201ENST00000624300 1904 ntBASIC2.4□□□□□ -2.03
CDX1P47902 AC000403.1-201ENST00000613696 3585 ntBASIC2.4□□□□□ -2.03
CDX1P47902 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC2.39□□□□□ -2.03
CDX1P47902 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.39□□□□□ -2.03
CDX1P47902 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC2.39□□□□□ -2.03
CDX1P47902 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC2.39□□□□□ -2.03
CDX1P47902 MIR22-201ENST00000362190 85 ntBASIC2.39□□□□□ -2.03
CDX1P47902 RNU6-527P-201ENST00000363425 104 ntBASIC2.39□□□□□ -2.03
CDX1P47902 UBA52P6-201ENST00000399822 382 ntBASIC2.39□□□□□ -2.03
CDX1P47902 CALM2P3-201ENST00000400429 449 ntBASIC2.39□□□□□ -2.03
CDX1P47902 RNA5SP274-201ENST00000410484 108 ntBASIC2.39□□□□□ -2.03
CDX1P47902 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC2.39□□□□□ -2.03
CDX1P47902 AC074117.2-201ENST00000417130 397 ntBASIC2.39□□□□□ -2.03
CDX1P47902 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC2.39□□□□□ -2.03
CDX1P47902 AL589823.1-201ENST00000429577 183 ntBASIC2.39□□□□□ -2.03
CDX1P47902 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC2.39□□□□□ -2.03
CDX1P47902 IGKV1OR-3-201ENST00000446944 348 ntBASIC2.39□□□□□ -2.03
CDX1P47902 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
CDX1P47902 EEF1B2P7-201ENST00000451177 676 ntBASIC2.39□□□□□ -2.03
CDX1P47902 RNU7-180P-201ENST00000459240 63 ntBASIC2.39□□□□□ -2.03
CDX1P47902 RNU6-261P-201ENST00000459506 102 ntBASIC2.39□□□□□ -2.03
CDX1P47902 AC080013.2-201ENST00000460866 323 ntBASIC2.39□□□□□ -2.03
CDX1P47902 AC083798.1-201ENST00000472671 131 ntBASIC2.39□□□□□ -2.03
CDX1P47902 RN7SL633P-201ENST00000488974 297 ntBASIC2.39□□□□□ -2.03
CDX1P47902 AC090096.1-201ENST00000489168 390 ntBASIC2.39□□□□□ -2.03
CDX1P47902 RPL23AP49-201ENST00000492925 468 ntBASIC2.39□□□□□ -2.03
CDX1P47902 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC2.39□□□□□ -2.03
CDX1P47902 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC2.39□□□□□ -2.03
CDX1P47902 RNU6-314P-201ENST00000516574 104 ntBASIC2.39□□□□□ -2.03
CDX1P47902 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC2.39□□□□□ -2.03
CDX1P47902 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC2.39□□□□□ -2.03
CDX1P47902 AL512360.1-201ENST00000555346 234 ntBASIC2.39□□□□□ -2.03
CDX1P47902 MIR5571-201ENST00000577998 113 ntBASIC2.39□□□□□ -2.03
CDX1P47902 MIR5583-1-201ENST00000580941 59 ntBASIC2.39□□□□□ -2.03
CDX1P47902 RPL12P50-201ENST00000603116 116 ntBASIC2.39□□□□□ -2.03
CDX1P47902 AC007621.1-201ENST00000604544 437 ntBASIC2.39□□□□□ -2.03
CDX1P47902 AC064807.4-201ENST00000607201 407 ntBASIC2.39□□□□□ -2.03
CDX1P47902 AC093732.2-201ENST00000607950 274 ntBASIC2.39□□□□□ -2.03
CDX1P47902 AC010338.1-201ENST00000621823 717 ntBASIC2.39□□□□□ -2.03
CDX1P47902 AP003400.5-201ENST00000624827 617 ntBASIC2.39□□□□□ -2.03
CDX1P47902 AC099654.12-201ENST00000639868 649 ntBASIC2.39□□□□□ -2.03
CDX1P47902 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC2.39□□□□□ -2.03
CDX1P47902 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
CDX1P47902 HAUS6P2-201ENST00000433254 2404 ntBASIC2.39□□□□□ -2.03
CDX1P47902 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.38□□□□□ -2.03
CDX1P47902 RNU6-78P-201ENST00000362897 107 ntBASIC2.38□□□□□ -2.03
CDX1P47902 SNORD56.1-201ENST00000362913 68 ntBASIC2.38□□□□□ -2.03
CDX1P47902 SNORA69-201ENST00000383895 132 ntBASIC2.38□□□□□ -2.03
CDX1P47902 MIR592-201ENST00000384959 97 ntBASIC2.38□□□□□ -2.03
CDX1P47902 OR9R1P-201ENST00000412200 877 ntBASIC2.38□□□□□ -2.03
CDX1P47902 NUP35P1-201ENST00000422734 947 ntBASIC2.38□□□□□ -2.03
CDX1P47902 AL591043.1-201ENST00000432461 424 ntBASIC2.38□□□□□ -2.03
CDX1P47902 AL121601.2-201ENST00000438019 707 ntBASIC2.38□□□□□ -2.03
CDX1P47902 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC2.38□□□□□ -2.03
CDX1P47902 RNU7-26P-201ENST00000458980 63 ntBASIC2.38□□□□□ -2.03
CDX1P47902 RNU7-167P-201ENST00000459160 62 ntBASIC2.38□□□□□ -2.03
CDX1P47902 AC073901.1-201ENST00000462471 408 ntBASIC2.38□□□□□ -2.03
CDX1P47902 RPL7P43-201ENST00000478876 753 ntBASIC2.38□□□□□ -2.03
CDX1P47902 AC140059.1-201ENST00000489238 361 ntBASIC2.38□□□□□ -2.03
CDX1P47902 AC018437.1-201ENST00000492214 406 ntBASIC2.38□□□□□ -2.03
CDX1P47902 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC2.38□□□□□ -2.03
CDX1P47902 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC2.38□□□□□ -2.03
CDX1P47902 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC2.38□□□□□ -2.03
CDX1P47902 AC022080.3-201ENST00000544433 482 ntBASIC2.38□□□□□ -2.03
CDX1P47902 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC2.38□□□□□ -2.03
CDX1P47902 MIR3941-201ENST00000582572 103 ntBASIC2.38□□□□□ -2.03
CDX1P47902 HNRNPDLP4-201ENST00000605144 301 ntBASIC2.38□□□□□ -2.03
CDX1P47902 AC012557.2-201ENST00000605919 418 ntBASIC2.38□□□□□ -2.03
CDX1P47902 AC002044.1-201ENST00000606707 158 ntBASIC2.38□□□□□ -2.03
CDX1P47902 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC2.38□□□□□ -2.03
CDX1P47902 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC2.38□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 107.7 ms