Protein–RNA interactions for Protein: P46779

RPL28, 60S ribosomal protein L28, humanhuman

Known RBP Predictions only

Length 137 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28P46779 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC1.03□□□□□ -2.24
RPL28P46779 KC877982.1-201ENST00000602313 470 ntBASIC1.03□□□□□ -2.24
RPL28P46779 AC116312.1-201ENST00000606841 314 ntBASIC1.03□□□□□ -2.24
RPL28P46779 AL022345.1-201ENST00000607292 135 ntBASIC1.03□□□□□ -2.24
RPL28P46779 AC130324.3-201ENST00000614165 542 ntBASIC1.03□□□□□ -2.24
RPL28P46779 AL589994.2-201ENST00000621124 579 ntBASIC1.03□□□□□ -2.24
RPL28P46779 AC009269.6-201ENST00000621778 588 ntBASIC1.03□□□□□ -2.24
RPL28P46779 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC1.03□□□□□ -2.24
RPL28P46779 AC090517.3-201ENST00000625170 141 ntBASIC1.03□□□□□ -2.24
RPL28P46779 AC099786.3-201ENST00000565735 1410 ntBASIC1.03□□□□□ -2.24
RPL28P46779 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC1.03□□□□□ -2.25
RPL28P46779 RNU6-511P-201ENST00000363496 107 ntBASIC1.02□□□□□ -2.25
RPL28P46779 RNU6-1210P-201ENST00000363775 107 ntBASIC1.02□□□□□ -2.25
RPL28P46779 RNU6-395P-201ENST00000365662 106 ntBASIC1.02□□□□□ -2.25
RPL28P46779 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC1.02□□□□□ -2.25
RPL28P46779 CISD1P1-201ENST00000393907 327 ntBASIC1.02□□□□□ -2.25
RPL28P46779 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC1.02□□□□□ -2.25
RPL28P46779 RNA5SP100-201ENST00000410903 110 ntBASIC1.02□□□□□ -2.25
RPL28P46779 RNA5SP59-201ENST00000410922 110 ntBASIC1.02□□□□□ -2.25
RPL28P46779 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC1.02□□□□□ -2.25
RPL28P46779 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC1.02□□□□□ -2.25
RPL28P46779 AL365338.1-201ENST00000422282 858 ntBASIC1.02□□□□□ -2.25
RPL28P46779 AL358794.1-201ENST00000445689 381 ntBASIC1.02□□□□□ -2.25
RPL28P46779 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC1.02□□□□□ -2.25
RPL28P46779 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC1.02□□□□□ -2.25
RPL28P46779 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC1.02□□□□□ -2.25
RPL28P46779 AL139824.2-201ENST00000458731 1095 ntBASIC1.02□□□□□ -2.25
RPL28P46779 snoU13.15-201ENST00000459407 104 ntBASIC1.02□□□□□ -2.25
RPL28P46779 HMGB1P30-201ENST00000492455 606 ntBASIC1.02□□□□□ -2.25
RPL28P46779 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC1.02□□□□□ -2.25
RPL28P46779 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC1.02□□□□□ -2.25
RPL28P46779 RNU6-250P-201ENST00000516958 103 ntBASIC1.02□□□□□ -2.25
RPL28P46779 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.02□□□□□ -2.25
RPL28P46779 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC1.02□□□□□ -2.25
RPL28P46779 AC068587.4-201ENST00000533893 186 ntBASIC1.02□□□□□ -2.25
RPL28P46779 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC1.02□□□□□ -2.25
RPL28P46779 ARL2BPP2-201ENST00000550907 489 ntBASIC1.02□□□□□ -2.25
RPL28P46779 MIR3945-201ENST00000581853 98 ntBASIC1.02□□□□□ -2.25
RPL28P46779 AC012065.4-201ENST00000602445 679 ntBASIC1.02□□□□□ -2.25
RPL28P46779 AL158827.2-201ENST00000602494 330 ntBASIC1.02□□□□□ -2.25
RPL28P46779 AC174048.1-201ENST00000603389 144 ntBASIC1.02□□□□□ -2.25
RPL28P46779 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.02□□□□□ -2.25
RPL28P46779 AC091304.6-201ENST00000619761 202 ntBASIC1.02□□□□□ -2.25
RPL28P46779 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.02□□□□□ -2.25
RPL28P46779 AL691447.3-201ENST00000635020 330 ntBASIC1.02□□□□□ -2.25
RPL28P46779 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC1.02□□□□□ -2.25
RPL28P46779 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC1.02□□□□□ -2.25
RPL28P46779 MTND4P23-201ENST00000447723 1363 ntBASIC1.01□□□□□ -2.25
RPL28P46779 CBX3P1-201ENST00000325243 554 ntBASIC1.01□□□□□ -2.25
RPL28P46779 RNU6-661P-201ENST00000362409 107 ntBASIC1.01□□□□□ -2.25
RPL28P46779 RNU1-62P-201ENST00000362599 164 ntBASIC1.01□□□□□ -2.25
RPL28P46779 Y_RNA.99-201ENST00000363138 105 ntBASIC1.01□□□□□ -2.25
RPL28P46779 RNU6-723P-201ENST00000383973 107 ntBASIC1.01□□□□□ -2.25
RPL28P46779 RNU2-36P-201ENST00000410361 191 ntBASIC1.01□□□□□ -2.25
RPL28P46779 RNU2-23P-201ENST00000410545 195 ntBASIC1.01□□□□□ -2.25
RPL28P46779 MTATP6P20-201ENST00000414147 562 ntBASIC1.01□□□□□ -2.25
RPL28P46779 ELOCP17-201ENST00000414751 326 ntBASIC1.01□□□□□ -2.25
RPL28P46779 AC009518.2-201ENST00000418056 731 ntBASIC1.01□□□□□ -2.25
RPL28P46779 ELOCP9-201ENST00000418624 239 ntBASIC1.01□□□□□ -2.25
RPL28P46779 SLC44A3-AS1-205ENST00000424505 612 ntBASIC1.01□□□□□ -2.25
RPL28P46779 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC1.01□□□□□ -2.25
RPL28P46779 VN1R108P-201ENST00000431580 830 ntBASIC1.01□□□□□ -2.25
RPL28P46779 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.01□□□□□ -2.25
RPL28P46779 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC1.01□□□□□ -2.25
RPL28P46779 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC1.01□□□□□ -2.25
RPL28P46779 AL583843.1-201ENST00000456070 346 ntBASIC1.01□□□□□ -2.25
RPL28P46779 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC1.01□□□□□ -2.25
RPL28P46779 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC1.01□□□□□ -2.25
RPL28P46779 RN7SL429P-201ENST00000479090 223 ntBASIC1.01□□□□□ -2.25
RPL28P46779 RN7SL489P-201ENST00000486185 223 ntBASIC1.01□□□□□ -2.25
RPL28P46779 RN7SL327P-201ENST00000488659 223 ntBASIC1.01□□□□□ -2.25
RPL28P46779 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.01□□□□□ -2.25
RPL28P46779 AC116337.1-201ENST00000509680 687 ntBASIC1.01□□□□□ -2.25
RPL28P46779 Y_RNA.675-201ENST00000516389 149 ntBASIC1.01□□□□□ -2.25
RPL28P46779 RNU6-548P-201ENST00000517083 115 ntBASIC1.01□□□□□ -2.25
RPL28P46779 AC091163.3-201ENST00000518269 1144 ntBASIC1.01□□□□□ -2.25
RPL28P46779 SNORD53B-201ENST00000577887 78 ntBASIC1.01□□□□□ -2.25
RPL28P46779 AL022154.1-201ENST00000604698 785 ntBASIC1.01□□□□□ -2.25
RPL28P46779 MIR15A-201ENST00000607334 83 ntBASIC1.01□□□□□ -2.25
RPL28P46779 MIR6845-201ENST00000613182 61 ntBASIC1.01□□□□□ -2.25
RPL28P46779 RN7SL853P-201ENST00000617250 223 ntBASIC1.01□□□□□ -2.25
RPL28P46779 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.01□□□□□ -2.25
RPL28P46779 AC006026.1-201ENST00000444025 1803 ntBASIC1.01□□□□□ -2.25
RPL28P46779 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC1□□□□□ -2.25
RPL28P46779 RNU6-433P-201ENST00000363216 104 ntBASIC1□□□□□ -2.25
RPL28P46779 RNY3P13-201ENST00000365542 102 ntBASIC1□□□□□ -2.25
RPL28P46779 RNU5E-6P-201ENST00000365574 115 ntBASIC1□□□□□ -2.25
RPL28P46779 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC1□□□□□ -2.25
RPL28P46779 RNU6-72P-201ENST00000384285 79 ntBASIC1□□□□□ -2.25
RPL28P46779 MIR29B2-201ENST00000385055 81 ntBASIC1□□□□□ -2.25
RPL28P46779 BTF3L4P2-201ENST00000392798 346 ntBASIC1□□□□□ -2.25
RPL28P46779 Y_RNA.623-201ENST00000411128 95 ntBASIC1□□□□□ -2.25
RPL28P46779 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC1□□□□□ -2.25
RPL28P46779 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC1□□□□□ -2.25
RPL28P46779 AC092809.3-201ENST00000415453 231 ntBASIC1□□□□□ -2.25
RPL28P46779 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC1□□□□□ -2.25
RPL28P46779 AL513185.2-201ENST00000425543 193 ntBASIC1□□□□□ -2.25
RPL28P46779 MTCO3P46-201ENST00000425787 232 ntBASIC1□□□□□ -2.25
RPL28P46779 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1□□□□□ -2.25
RPL28P46779 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC1□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 111 ms