Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 RNU6-436P-201ENST00000516171 114 ntBASIC4.87□□□□□ -1.63
VARSP26640 RNU6-453P-201ENST00000516819 85 ntBASIC4.87□□□□□ -1.63
VARSP26640 RNU6-703P-201ENST00000516946 107 ntBASIC4.87□□□□□ -1.63
VARSP26640 AP004371.1-201ENST00000525240 214 ntBASIC4.87□□□□□ -1.63
VARSP26640 AP001328.1-201ENST00000528550 176 ntBASIC4.87□□□□□ -1.63
VARSP26640 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC4.87□□□□□ -1.63
VARSP26640 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC4.87□□□□□ -1.63
VARSP26640 AC005255.1-201ENST00000593748 216 ntBASIC4.87□□□□□ -1.63
VARSP26640 AC006380.1-201ENST00000603598 186 ntBASIC4.87□□□□□ -1.63
VARSP26640 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC4.87□□□□□ -1.63
VARSP26640 uc_338.18-201ENST00000615451 175 ntBASIC4.87□□□□□ -1.63
VARSP26640 AL078604.3-201ENST00000615580 211 ntBASIC4.87□□□□□ -1.63
VARSP26640 AC013791.1-201ENST00000616619 62 ntBASIC4.87□□□□□ -1.63
VARSP26640 RN7SL722P-201ENST00000617780 284 ntBASIC4.87□□□□□ -1.63
VARSP26640 RN7SL565P-201ENST00000618246 284 ntBASIC4.87□□□□□ -1.63
VARSP26640 MTND5P32-201ENST00000560711 1802 ntBASIC4.87□□□□□ -1.63
VARSP26640 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.87□□□□□ -1.63
VARSP26640 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
VARSP26640 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC4.87□□□□□ -1.63
VARSP26640 AF127577.6-201ENST00000623352 2191 ntBASIC4.87□□□□□ -1.63
VARSP26640 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
VARSP26640 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
VARSP26640 AC068700.1-201ENST00000565862 3754 ntBASIC4.86□□□□□ -1.63
VARSP26640 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
VARSP26640 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
VARSP26640 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC4.86□□□□□ -1.63
VARSP26640 SNURFL-201ENST00000309296 343 ntBASIC4.86□□□□□ -1.63
VARSP26640 RNU6-755P-201ENST00000364400 103 ntBASIC4.86□□□□□ -1.63
VARSP26640 RNU6-1141P-201ENST00000364520 107 ntBASIC4.86□□□□□ -1.63
VARSP26640 MIR141-201ENST00000384975 95 ntBASIC4.86□□□□□ -1.63
VARSP26640 MIR549A-201ENST00000385268 96 ntBASIC4.86□□□□□ -1.63
VARSP26640 SNORA26.5-201ENST00000391215 123 ntBASIC4.86□□□□□ -1.63
VARSP26640 AC074117.2-201ENST00000417130 397 ntBASIC4.86□□□□□ -1.63
VARSP26640 BPY2DP-201ENST00000422208 265 ntBASIC4.86□□□□□ -1.63
VARSP26640 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC4.86□□□□□ -1.63
VARSP26640 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC4.86□□□□□ -1.63
VARSP26640 AC091179.3-201ENST00000474761 144 ntBASIC4.86□□□□□ -1.63
VARSP26640 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC4.86□□□□□ -1.63
VARSP26640 SCARNA8-201ENST00000515924 131 ntBASIC4.86□□□□□ -1.63
VARSP26640 RN7SKP46-201ENST00000515942 234 ntBASIC4.86□□□□□ -1.63
VARSP26640 IGKV1-32-201ENST00000519290 311 ntBASIC4.86□□□□□ -1.63
VARSP26640 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC4.86□□□□□ -1.63
VARSP26640 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
VARSP26640 MIR4697-201ENST00000582977 78 ntBASIC4.86□□□□□ -1.63
VARSP26640 AL359198.2-201ENST00000611836 194 ntBASIC4.86□□□□□ -1.63
VARSP26640 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC4.86□□□□□ -1.63
VARSP26640 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
VARSP26640 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
VARSP26640 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
VARSP26640 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
VARSP26640 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
VARSP26640 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
VARSP26640 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
VARSP26640 A2MP1-204ENST00000566278 4130 ntBASIC4.86□□□□□ -1.63
VARSP26640 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
VARSP26640 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
VARSP26640 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.85□□□□□ -1.63
VARSP26640 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
VARSP26640 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
VARSP26640 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC4.85□□□□□ -1.63
VARSP26640 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
VARSP26640 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
VARSP26640 Y_RNA.24-201ENST00000362508 103 ntBASIC4.85□□□□□ -1.63
VARSP26640 RNU6-407P-201ENST00000365280 104 ntBASIC4.85□□□□□ -1.63
VARSP26640 RNA5SP87-201ENST00000384155 118 ntBASIC4.85□□□□□ -1.63
VARSP26640 SNORA70.10-201ENST00000384515 134 ntBASIC4.85□□□□□ -1.63
VARSP26640 AL590139.1-201ENST00000416267 400 ntBASIC4.85□□□□□ -1.63
VARSP26640 AL121914.1-201ENST00000450188 156 ntBASIC4.85□□□□□ -1.63
VARSP26640 NDUFS5P3-201ENST00000450668 321 ntBASIC4.85□□□□□ -1.63
VARSP26640 AC009220.1-201ENST00000451614 275 ntBASIC4.85□□□□□ -1.63
VARSP26640 AL691482.1-201ENST00000453255 87 ntBASIC4.85□□□□□ -1.63
VARSP26640 AL645939.1-201ENST00000453429 797 ntBASIC4.85□□□□□ -1.63
VARSP26640 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC4.85□□□□□ -1.63
VARSP26640 RPS23P7-201ENST00000466210 444 ntBASIC4.85□□□□□ -1.63
VARSP26640 RN7SL738P-201ENST00000470264 297 ntBASIC4.85□□□□□ -1.63
VARSP26640 FCF1P8-201ENST00000510322 597 ntBASIC4.85□□□□□ -1.63
VARSP26640 AC136628.3-201ENST00000521868 290 ntBASIC4.85□□□□□ -1.63
VARSP26640 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC4.85□□□□□ -1.63
VARSP26640 NACAP3-201ENST00000552100 481 ntBASIC4.85□□□□□ -1.63
VARSP26640 AC021231.3-201ENST00000558497 370 ntBASIC4.85□□□□□ -1.63
VARSP26640 MTND5P34-201ENST00000568888 325 ntBASIC4.85□□□□□ -1.63
VARSP26640 UBE2Q2P6-201ENST00000612666 153 ntBASIC4.85□□□□□ -1.63
VARSP26640 AC083809.1-201ENST00000615051 472 ntBASIC4.85□□□□□ -1.63
VARSP26640 AL023881.1-201ENST00000621088 301 ntBASIC4.85□□□□□ -1.63
VARSP26640 AL354798.1-201ENST00000622505 329 ntBASIC4.85□□□□□ -1.63
VARSP26640 AP001340.1-201ENST00000624405 217 ntBASIC4.85□□□□□ -1.63
VARSP26640 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC4.85□□□□□ -1.63
VARSP26640 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC4.85□□□□□ -1.63
VARSP26640 MARK2P15-201ENST00000432204 2186 ntBASIC4.85□□□□□ -1.63
VARSP26640 AC134026.1-201ENST00000623249 2239 ntBASIC4.85□□□□□ -1.63
VARSP26640 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
VARSP26640 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC4.85□□□□□ -1.63
VARSP26640 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC4.85□□□□□ -1.63
VARSP26640 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
VARSP26640 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC4.84□□□□□ -1.63
VARSP26640 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
VARSP26640 SDAD1P1-202ENST00000524156 2051 ntBASIC4.84□□□□□ -1.63
VARSP26640 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4.84□□□□□ -1.63
VARSP26640 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.84□□□□□ -1.63
VARSP26640 RNU6-727P-201ENST00000363592 107 ntBASIC4.84□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 121.3 ms