Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.65□□□□□ -1.99
CDH3P22223 USP9YP18-201ENST00000425912 695 ntBASIC2.65□□□□□ -1.99
CDH3P22223 AC063976.3-201ENST00000426849 329 ntBASIC2.65□□□□□ -1.99
CDH3P22223 GTF2IP20-201ENST00000431663 360 ntBASIC2.65□□□□□ -1.99
CDH3P22223 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC2.65□□□□□ -1.99
CDH3P22223 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC2.65□□□□□ -1.99
CDH3P22223 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC2.65□□□□□ -1.99
CDH3P22223 SNRPFP3-201ENST00000457792 225 ntBASIC2.65□□□□□ -1.99
CDH3P22223 SNORD109B-201ENST00000458961 67 ntBASIC2.65□□□□□ -1.99
CDH3P22223 SNORD109A-201ENST00000459128 67 ntBASIC2.65□□□□□ -1.99
CDH3P22223 AL121769.1-201ENST00000469473 401 ntBASIC2.65□□□□□ -1.99
CDH3P22223 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.65□□□□□ -1.99
CDH3P22223 RNA5SP401-201ENST00000515920 127 ntBASIC2.65□□□□□ -1.99
CDH3P22223 RNU6-1183P-201ENST00000517054 60 ntBASIC2.65□□□□□ -1.99
CDH3P22223 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC2.65□□□□□ -1.99
CDH3P22223 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC2.65□□□□□ -1.99
CDH3P22223 AP000889.1-201ENST00000530968 660 ntBASIC2.65□□□□□ -1.99
CDH3P22223 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC2.65□□□□□ -1.99
CDH3P22223 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC2.65□□□□□ -1.99
CDH3P22223 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC2.65□□□□□ -1.99
CDH3P22223 MIR4424-201ENST00000585257 86 ntBASIC2.65□□□□□ -1.99
CDH3P22223 U6.99-201ENST00000637524 83 ntBASIC2.65□□□□□ -1.99
CDH3P22223 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
CDH3P22223 RNY4P14-201ENST00000363656 96 ntBASIC2.64□□□□□ -1.99
CDH3P22223 RNU1-112P-201ENST00000364401 164 ntBASIC2.64□□□□□ -1.99
CDH3P22223 SNORA67.1-201ENST00000364749 141 ntBASIC2.64□□□□□ -1.99
CDH3P22223 RNU1-138P-201ENST00000384093 164 ntBASIC2.64□□□□□ -1.99
CDH3P22223 MIR181A2-201ENST00000384863 110 ntBASIC2.64□□□□□ -1.99
CDH3P22223 AL512633.1-201ENST00000399931 655 ntBASIC2.64□□□□□ -1.99
CDH3P22223 RNA5SP21-201ENST00000410917 96 ntBASIC2.64□□□□□ -1.99
CDH3P22223 AC007064.1-201ENST00000412238 351 ntBASIC2.64□□□□□ -1.99
CDH3P22223 Z82209.1-201ENST00000422141 2135 ntBASIC2.64□□□□□ -1.99
CDH3P22223 ACTR3BP6-201ENST00000422332 1241 ntBASIC2.64□□□□□ -1.99
CDH3P22223 MTCO1P20-201ENST00000425366 358 ntBASIC2.64□□□□□ -1.99
CDH3P22223 AC007560.1-201ENST00000426912 237 ntBASIC2.64□□□□□ -1.99
CDH3P22223 HMGB1P9-201ENST00000429856 646 ntBASIC2.64□□□□□ -1.99
CDH3P22223 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC2.64□□□□□ -1.99
CDH3P22223 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC2.64□□□□□ -1.99
CDH3P22223 AL078601.1-201ENST00000444542 271 ntBASIC2.64□□□□□ -1.99
CDH3P22223 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC2.64□□□□□ -1.99
CDH3P22223 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.64□□□□□ -1.99
CDH3P22223 AC233279.1-201ENST00000455300 423 ntBASIC2.64□□□□□ -1.99
CDH3P22223 AL583843.1-201ENST00000456070 346 ntBASIC2.64□□□□□ -1.99
CDH3P22223 SCARNA18-201ENST00000459004 134 ntBASIC2.64□□□□□ -1.99
CDH3P22223 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC2.64□□□□□ -1.99
CDH3P22223 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC2.64□□□□□ -1.99
CDH3P22223 CCDC34P1-201ENST00000507441 517 ntBASIC2.64□□□□□ -1.99
CDH3P22223 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC2.64□□□□□ -1.99
CDH3P22223 MRPS36P2-201ENST00000512569 299 ntBASIC2.64□□□□□ -1.99
CDH3P22223 RNU6-1178P-201ENST00000516674 107 ntBASIC2.64□□□□□ -1.99
CDH3P22223 MTND1P5-201ENST00000517906 940 ntBASIC2.64□□□□□ -1.99
CDH3P22223 AC022634.1-201ENST00000520765 532 ntBASIC2.64□□□□□ -1.99
CDH3P22223 AL137161.1-201ENST00000532231 390 ntBASIC2.64□□□□□ -1.99
CDH3P22223 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC2.64□□□□□ -1.99
CDH3P22223 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC2.64□□□□□ -1.99
CDH3P22223 AL138976.2-201ENST00000563989 694 ntBASIC2.64□□□□□ -1.99
CDH3P22223 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.64□□□□□ -1.99
CDH3P22223 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC2.64□□□□□ -1.99
CDH3P22223 MIR3117-201ENST00000584034 78 ntBASIC2.64□□□□□ -1.99
CDH3P22223 AL162413.1-201ENST00000603198 110 ntBASIC2.64□□□□□ -1.99
CDH3P22223 AC006023.1-201ENST00000603944 259 ntBASIC2.64□□□□□ -1.99
CDH3P22223 AC104237.2-201ENST00000612456 443 ntBASIC2.64□□□□□ -1.99
CDH3P22223 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC2.64□□□□□ -1.99
CDH3P22223 YWHAEP7-203ENST00000622054 312 ntBASIC2.64□□□□□ -1.99
CDH3P22223 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC2.64□□□□□ -1.99
CDH3P22223 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC2.64□□□□□ -1.99
CDH3P22223 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC2.64□□□□□ -1.99
CDH3P22223 ANKRD36BP1-202ENST00000604892 1417 ntBASIC2.64□□□□□ -1.99
CDH3P22223 OFD1P6Y-202ENST00000451061 2724 ntBASIC2.64□□□□□ -1.99
CDH3P22223 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
CDH3P22223 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
CDH3P22223 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
CDH3P22223 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC2.63□□□□□ -1.99
CDH3P22223 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.63□□□□□ -1.99
CDH3P22223 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC2.63□□□□□ -1.99
CDH3P22223 MIR412-201ENST00000362142 91 ntBASIC2.63□□□□□ -1.99
CDH3P22223 Y_RNA.38-201ENST00000362617 102 ntBASIC2.63□□□□□ -1.99
CDH3P22223 RNU6-859P-201ENST00000362728 107 ntBASIC2.63□□□□□ -1.99
CDH3P22223 RNU6-384P-201ENST00000364900 104 ntBASIC2.63□□□□□ -1.99
CDH3P22223 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
CDH3P22223 Y_RNA.402-201ENST00000383972 102 ntBASIC2.63□□□□□ -1.99
CDH3P22223 Y_RNA.500-201ENST00000384466 111 ntBASIC2.63□□□□□ -1.99
CDH3P22223 RNU6-45P-201ENST00000384471 107 ntBASIC2.63□□□□□ -1.99
CDH3P22223 RNU6-1179P-201ENST00000384667 107 ntBASIC2.63□□□□□ -1.99
CDH3P22223 MIR196B-201ENST00000384852 84 ntBASIC2.63□□□□□ -1.99
CDH3P22223 SNORA16.2-201ENST00000390991 127 ntBASIC2.63□□□□□ -1.99
CDH3P22223 SNORD115-47-201ENST00000391226 86 ntBASIC2.63□□□□□ -1.99
CDH3P22223 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC2.63□□□□□ -1.99
CDH3P22223 USP9YP27-201ENST00000418455 438 ntBASIC2.63□□□□□ -1.99
CDH3P22223 EIF1P1-201ENST00000421436 341 ntBASIC2.63□□□□□ -1.99
CDH3P22223 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC2.63□□□□□ -1.99
CDH3P22223 RPS3AP44-201ENST00000425466 790 ntBASIC2.63□□□□□ -1.99
CDH3P22223 AC236972.1-201ENST00000433225 199 ntBASIC2.63□□□□□ -1.99
CDH3P22223 RPS15AP5-201ENST00000436276 388 ntBASIC2.63□□□□□ -1.99
CDH3P22223 AC098831.1-201ENST00000440661 216 ntBASIC2.63□□□□□ -1.99
CDH3P22223 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC2.63□□□□□ -1.99
CDH3P22223 AC003982.1-202ENST00000469928 248 ntBASIC2.63□□□□□ -1.99
CDH3P22223 UBE2DNL-203ENST00000474922 222 ntBASIC2.63□□□□□ -1.99
CDH3P22223 TRBV1-201ENST00000476502 284 ntBASIC2.63□□□□□ -1.99
CDH3P22223 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC2.63□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 115.5 ms