Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 RPL9P6-201ENST00000492764 598 ntBASIC2.16□□□□□ -2.06
XRCC1P18887 MTND4P2-201ENST00000507767 1203 ntBASIC2.16□□□□□ -2.06
XRCC1P18887 SNORA18.6-201ENST00000516792 115 ntBASIC2.16□□□□□ -2.06
XRCC1P18887 RNU6-685P-201ENST00000517088 95 ntBASIC2.16□□□□□ -2.06
XRCC1P18887 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC2.16□□□□□ -2.06
XRCC1P18887 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC2.16□□□□□ -2.06
XRCC1P18887 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC2.16□□□□□ -2.06
XRCC1P18887 AC092325.1-201ENST00000566449 554 ntBASIC2.16□□□□□ -2.06
XRCC1P18887 MIR5571-201ENST00000577998 113 ntBASIC2.16□□□□□ -2.06
XRCC1P18887 Z99497.2-201ENST00000603634 310 ntBASIC2.16□□□□□ -2.06
XRCC1P18887 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC2.16□□□□□ -2.06
XRCC1P18887 AC109347.2-201ENST00000610220 349 ntBASIC2.16□□□□□ -2.06
XRCC1P18887 AC024581.2-201ENST00000619986 252 ntBASIC2.16□□□□□ -2.06
XRCC1P18887 AC092656.1-203ENST00000624134 423 ntBASIC2.16□□□□□ -2.06
XRCC1P18887 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.15□□□□□ -2.06
XRCC1P18887 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.15□□□□□ -2.07
XRCC1P18887 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.15□□□□□ -2.07
XRCC1P18887 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
XRCC1P18887 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
XRCC1P18887 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
XRCC1P18887 SNORA38-201ENST00000363946 132 ntBASIC2.15□□□□□ -2.07
XRCC1P18887 SNORA75B-201ENST00000384053 137 ntBASIC2.15□□□□□ -2.07
XRCC1P18887 SNORA48.3-201ENST00000391081 134 ntBASIC2.15□□□□□ -2.07
XRCC1P18887 RNA5SP111-201ENST00000411386 101 ntBASIC2.15□□□□□ -2.07
XRCC1P18887 AC097463.2-201ENST00000421074 142 ntBASIC2.15□□□□□ -2.07
XRCC1P18887 PIGFP2-201ENST00000421400 651 ntBASIC2.15□□□□□ -2.07
XRCC1P18887 RPS3AP44-201ENST00000425466 790 ntBASIC2.15□□□□□ -2.07
XRCC1P18887 RPL30P4-201ENST00000429309 333 ntBASIC2.15□□□□□ -2.07
XRCC1P18887 AL022238.1-201ENST00000442557 355 ntBASIC2.15□□□□□ -2.07
XRCC1P18887 RNU7-26P-201ENST00000458980 63 ntBASIC2.15□□□□□ -2.07
XRCC1P18887 RNU6-717P-201ENST00000459076 104 ntBASIC2.15□□□□□ -2.07
XRCC1P18887 RPL36AP48-201ENST00000485521 314 ntBASIC2.15□□□□□ -2.07
XRCC1P18887 MTAPP1-201ENST00000489154 819 ntBASIC2.15□□□□□ -2.07
XRCC1P18887 AC079804.2-201ENST00000490376 200 ntBASIC2.15□□□□□ -2.07
XRCC1P18887 AC090255.1-201ENST00000495779 349 ntBASIC2.15□□□□□ -2.07
XRCC1P18887 AC112206.3-201ENST00000514578 389 ntBASIC2.15□□□□□ -2.07
XRCC1P18887 RNU6-1220P-201ENST00000517126 108 ntBASIC2.15□□□□□ -2.07
XRCC1P18887 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC2.15□□□□□ -2.07
XRCC1P18887 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.15□□□□□ -2.07
XRCC1P18887 MTND3P12-201ENST00000559068 328 ntBASIC2.15□□□□□ -2.07
XRCC1P18887 AC012213.3-201ENST00000577199 777 ntBASIC2.15□□□□□ -2.07
XRCC1P18887 MIR5692A1-201ENST00000580523 69 ntBASIC2.15□□□□□ -2.07
XRCC1P18887 AC105245.1-201ENST00000581934 244 ntBASIC2.15□□□□□ -2.07
XRCC1P18887 AC064872.1-201ENST00000604823 1072 ntBASIC2.15□□□□□ -2.07
XRCC1P18887 AL121992.2-201ENST00000606262 256 ntBASIC2.15□□□□□ -2.07
XRCC1P18887 MIR98-201ENST00000606724 119 ntBASIC2.15□□□□□ -2.07
XRCC1P18887 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC2.15□□□□□ -2.07
XRCC1P18887 AC096772.1-201ENST00000609146 564 ntBASIC2.15□□□□□ -2.07
XRCC1P18887 AP001486.3-201ENST00000615334 372 ntBASIC2.15□□□□□ -2.07
XRCC1P18887 MIR6132-201ENST00000622083 109 ntBASIC2.15□□□□□ -2.07
XRCC1P18887 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
XRCC1P18887 AL596028.1-201ENST00000326971 197 ntBASIC2.14□□□□□ -2.07
XRCC1P18887 MIR1261-201ENST00000408659 82 ntBASIC2.14□□□□□ -2.07
XRCC1P18887 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC2.14□□□□□ -2.07
XRCC1P18887 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC2.14□□□□□ -2.07
XRCC1P18887 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC2.14□□□□□ -2.07
XRCC1P18887 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC2.14□□□□□ -2.07
XRCC1P18887 MTND1P27-201ENST00000451117 902 ntBASIC2.14□□□□□ -2.07
XRCC1P18887 RPS27AP8-201ENST00000452665 445 ntBASIC2.14□□□□□ -2.07
XRCC1P18887 AC006026.2-201ENST00000457376 180 ntBASIC2.14□□□□□ -2.07
XRCC1P18887 AC022364.2-201ENST00000457963 554 ntBASIC2.14□□□□□ -2.07
XRCC1P18887 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
XRCC1P18887 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC2.14□□□□□ -2.07
XRCC1P18887 AC079598.5-201ENST00000547460 117 ntBASIC2.14□□□□□ -2.07
XRCC1P18887 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC2.14□□□□□ -2.07
XRCC1P18887 RPS3AP23-202ENST00000574601 686 ntBASIC2.14□□□□□ -2.07
XRCC1P18887 AL670379.4-201ENST00000605279 254 ntBASIC2.14□□□□□ -2.07
XRCC1P18887 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
XRCC1P18887 AC073114.1-201ENST00000612027 490 ntBASIC2.14□□□□□ -2.07
XRCC1P18887 HMGB1P24-202ENST00000615653 685 ntBASIC2.14□□□□□ -2.07
XRCC1P18887 AC072046.2-201ENST00000618366 268 ntBASIC2.14□□□□□ -2.07
XRCC1P18887 USP12-203ENST00000620323 349 ntTSL 3 BASIC2.14□□□□□ -2.07
XRCC1P18887 U6.114-201ENST00000636407 96 ntBASIC2.14□□□□□ -2.07
XRCC1P18887 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.14□□□□□ -2.07
XRCC1P18887 AC092881.1-201ENST00000638218 2733 ntBASIC2.14□□□□□ -2.07
XRCC1P18887 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
XRCC1P18887 Z75746.1-201ENST00000440243 2080 ntBASIC2.13□□□□□ -2.07
XRCC1P18887 RNY3P9-201ENST00000384727 106 ntBASIC2.13□□□□□ -2.07
XRCC1P18887 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
XRCC1P18887 RNU6-195P-201ENST00000411352 109 ntBASIC2.13□□□□□ -2.07
XRCC1P18887 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.13□□□□□ -2.07
XRCC1P18887 AL031779.1-201ENST00000415663 330 ntBASIC2.13□□□□□ -2.07
XRCC1P18887 C1DP2-201ENST00000418167 426 ntBASIC2.13□□□□□ -2.07
XRCC1P18887 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC2.13□□□□□ -2.07
XRCC1P18887 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC2.13□□□□□ -2.07
XRCC1P18887 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC2.13□□□□□ -2.07
XRCC1P18887 AL121890.1-201ENST00000435457 205 ntBASIC2.13□□□□□ -2.07
XRCC1P18887 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC2.13□□□□□ -2.07
XRCC1P18887 RPL23AP7-203ENST00000449021 469 ntBASIC2.13□□□□□ -2.07
XRCC1P18887 AC117503.1-201ENST00000472241 394 ntBASIC2.13□□□□□ -2.07
XRCC1P18887 HMGB1P30-201ENST00000492455 606 ntBASIC2.13□□□□□ -2.07
XRCC1P18887 RBBP4P6-201ENST00000508098 202 ntBASIC2.13□□□□□ -2.07
XRCC1P18887 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC2.13□□□□□ -2.07
XRCC1P18887 SCARNA16.3-201ENST00000516595 184 ntBASIC2.13□□□□□ -2.07
XRCC1P18887 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC2.13□□□□□ -2.07
XRCC1P18887 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC2.13□□□□□ -2.07
XRCC1P18887 MIR5002-201ENST00000584713 97 ntBASIC2.13□□□□□ -2.07
XRCC1P18887 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC2.13□□□□□ -2.07
XRCC1P18887 AC093648.1-201ENST00000623546 606 ntBASIC2.13□□□□□ -2.07
XRCC1P18887 MIR219B-201ENST00000637023 88 ntBASIC2.13□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 111.9 ms