Protein–RNA interactions for Protein: P13942

COL11A2, Collagen alpha-2(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2P13942 AC011816.1-201ENST00000441346 546 ntBASIC3.56□□□□□ -1.84
COL11A2P13942 GSTA11P-201ENST00000452866 669 ntBASIC3.56□□□□□ -1.84
COL11A2P13942 snoU109.4-201ENST00000458953 143 ntBASIC3.56□□□□□ -1.84
COL11A2P13942 AC010631.1-201ENST00000474150 156 ntBASIC3.56□□□□□ -1.84
COL11A2P13942 TRBV12-1-201ENST00000479785 344 ntBASIC3.56□□□□□ -1.84
COL11A2P13942 HMGB1P30-201ENST00000492455 606 ntBASIC3.56□□□□□ -1.84
COL11A2P13942 AC104564.1-201ENST00000493028 407 ntBASIC3.56□□□□□ -1.84
COL11A2P13942 RPL22P13-201ENST00000493291 347 ntBASIC3.56□□□□□ -1.84
COL11A2P13942 RNA5SP384-201ENST00000516615 116 ntBASIC3.56□□□□□ -1.84
COL11A2P13942 RNU6-307P-201ENST00000516743 106 ntBASIC3.56□□□□□ -1.84
COL11A2P13942 SNORA31.21-201ENST00000517180 77 ntBASIC3.56□□□□□ -1.84
COL11A2P13942 Y_RNA.721-201ENST00000517207 102 ntBASIC3.56□□□□□ -1.84
COL11A2P13942 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
COL11A2P13942 RANP3-201ENST00000530970 276 ntBASIC3.56□□□□□ -1.84
COL11A2P13942 AC023157.2-201ENST00000540596 141 ntBASIC3.56□□□□□ -1.84
COL11A2P13942 AC027176.1-201ENST00000560204 514 ntBASIC3.56□□□□□ -1.84
COL11A2P13942 AC141273.2-201ENST00000618989 130 ntBASIC3.56□□□□□ -1.84
COL11A2P13942 AP001005.3-201ENST00000622049 129 ntBASIC3.56□□□□□ -1.84
COL11A2P13942 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
COL11A2P13942 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC3.55□□□□□ -1.84
COL11A2P13942 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
COL11A2P13942 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC3.55□□□□□ -1.84
COL11A2P13942 AL022311.1-201ENST00000623726 19416 ntBASIC3.55□□□□□ -1.84
COL11A2P13942 MIR423-201ENST00000362201 94 ntBASIC3.55□□□□□ -1.84
COL11A2P13942 RNU1-115P-201ENST00000365329 160 ntBASIC3.55□□□□□ -1.84
COL11A2P13942 DEFB109C-201ENST00000382575 264 ntBASIC3.55□□□□□ -1.84
COL11A2P13942 DEFB109B-201ENST00000382656 264 ntBASIC3.55□□□□□ -1.84
COL11A2P13942 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC3.55□□□□□ -1.84
COL11A2P13942 RNU7-167P-201ENST00000459160 62 ntBASIC3.55□□□□□ -1.84
COL11A2P13942 HSPE1P6-201ENST00000479457 291 ntBASIC3.55□□□□□ -1.84
COL11A2P13942 AC026801.1-201ENST00000497178 464 ntBASIC3.55□□□□□ -1.84
COL11A2P13942 RNU2-53P-201ENST00000516257 147 ntBASIC3.55□□□□□ -1.84
COL11A2P13942 IGHVII-62-1-201ENST00000519283 235 ntBASIC3.55□□□□□ -1.84
COL11A2P13942 AC087854.1-201ENST00000519706 414 ntBASIC3.55□□□□□ -1.84
COL11A2P13942 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC3.55□□□□□ -1.84
COL11A2P13942 AC092447.9-201ENST00000603395 144 ntBASIC3.55□□□□□ -1.84
COL11A2P13942 AC104695.3-201ENST00000604052 296 ntBASIC3.55□□□□□ -1.84
COL11A2P13942 RMST_8.1-201ENST00000610287 165 ntBASIC3.55□□□□□ -1.84
COL11A2P13942 AL021879.1-201ENST00000611756 288 ntBASIC3.55□□□□□ -1.84
COL11A2P13942 AL161423.1-201ENST00000613700 262 ntBASIC3.55□□□□□ -1.84
COL11A2P13942 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
COL11A2P13942 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC3.55□□□□□ -1.84
COL11A2P13942 ZNF734P-201ENST00000419494 1534 ntBASIC3.54□□□□□ -1.84
COL11A2P13942 RNU6-26P-201ENST00000383985 107 ntBASIC3.54□□□□□ -1.84
COL11A2P13942 RNU6ATAC16P-201ENST00000408591 138 ntBASIC3.54□□□□□ -1.84
COL11A2P13942 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC3.54□□□□□ -1.84
COL11A2P13942 RPLP0P7-201ENST00000416050 667 ntBASIC3.54□□□□□ -1.84
COL11A2P13942 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC3.54□□□□□ -1.84
COL11A2P13942 USP9YP30-201ENST00000430729 455 ntBASIC3.54□□□□□ -1.84
COL11A2P13942 PCNPP5-201ENST00000452246 481 ntBASIC3.54□□□□□ -1.84
COL11A2P13942 AC234775.1-201ENST00000454247 670 ntBASIC3.54□□□□□ -1.84
COL11A2P13942 AC087385.1-201ENST00000475062 312 ntBASIC3.54□□□□□ -1.84
COL11A2P13942 RPL17P19-201ENST00000489069 552 ntBASIC3.54□□□□□ -1.84
COL11A2P13942 AC114801.2-201ENST00000503825 781 ntBASIC3.54□□□□□ -1.84
COL11A2P13942 TBCAP3-201ENST00000512475 312 ntBASIC3.54□□□□□ -1.84
COL11A2P13942 AC016065.2-201ENST00000514530 444 ntBASIC3.54□□□□□ -1.84
COL11A2P13942 SCGB1D5P-201ENST00000515134 247 ntBASIC3.54□□□□□ -1.84
COL11A2P13942 SCARNA16.2-201ENST00000516520 172 ntBASIC3.54□□□□□ -1.84
COL11A2P13942 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC3.54□□□□□ -1.84
COL11A2P13942 TGIF1P1-201ENST00000558095 802 ntBASIC3.54□□□□□ -1.84
COL11A2P13942 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC3.54□□□□□ -1.84
COL11A2P13942 AC026470.2-201ENST00000561492 181 ntBASIC3.54□□□□□ -1.84
COL11A2P13942 SUB1P3-201ENST00000564581 315 ntBASIC3.54□□□□□ -1.84
COL11A2P13942 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC3.54□□□□□ -1.84
COL11A2P13942 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
COL11A2P13942 MIR4769-201ENST00000584126 77 ntBASIC3.54□□□□□ -1.84
COL11A2P13942 AC100812.1-201ENST00000607622 580 ntBASIC3.54□□□□□ -1.84
COL11A2P13942 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC3.54□□□□□ -1.84
COL11A2P13942 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC3.54□□□□□ -1.84
COL11A2P13942 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.54□□□□□ -1.84
COL11A2P13942 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.54□□□□□ -1.84
COL11A2P13942 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC3.54□□□□□ -1.84
COL11A2P13942 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC3.54□□□□□ -1.84
COL11A2P13942 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC3.54□□□□□ -1.84
COL11A2P13942 MTND5P7-201ENST00000413558 1798 ntBASIC3.54□□□□□ -1.84
COL11A2P13942 AC010615.1-201ENST00000594254 1764 ntBASIC3.54□□□□□ -1.84
COL11A2P13942 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
COL11A2P13942 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
COL11A2P13942 HSPA8P4-201ENST00000511877 1920 ntBASIC3.53□□□□□ -1.84
COL11A2P13942 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
COL11A2P13942 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
COL11A2P13942 Y_RNA.151-201ENST00000363566 112 ntBASIC3.53□□□□□ -1.84
COL11A2P13942 Y_RNA.556-201ENST00000384677 113 ntBASIC3.53□□□□□ -1.84
COL11A2P13942 RNU6-293P-201ENST00000411259 106 ntBASIC3.53□□□□□ -1.84
COL11A2P13942 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC3.53□□□□□ -1.84
COL11A2P13942 USMG5P1-201ENST00000425964 177 ntBASIC3.53□□□□□ -1.84
COL11A2P13942 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC3.53□□□□□ -1.84
COL11A2P13942 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC3.53□□□□□ -1.84
COL11A2P13942 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC3.53□□□□□ -1.84
COL11A2P13942 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC3.53□□□□□ -1.84
COL11A2P13942 AL162389.1-201ENST00000449233 177 ntBASIC3.53□□□□□ -1.84
COL11A2P13942 AC008571.1-201ENST00000467232 300 ntBASIC3.53□□□□□ -1.84
COL11A2P13942 SRIP1-201ENST00000489235 288 ntBASIC3.53□□□□□ -1.84
COL11A2P13942 AC092436.3-201ENST00000511788 257 ntBASIC3.53□□□□□ -1.84
COL11A2P13942 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
COL11A2P13942 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC3.53□□□□□ -1.84
COL11A2P13942 MIR4512-201ENST00000583257 77 ntBASIC3.53□□□□□ -1.84
COL11A2P13942 AC012443.1-201ENST00000605605 231 ntBASIC3.53□□□□□ -1.84
COL11A2P13942 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC3.53□□□□□ -1.84
COL11A2P13942 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 97.4 ms