Protein–RNA interactions for Protein: P13612

ITGA4, Integrin alpha-4, humanhuman

Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4P13612 RAC1P9-201ENST00000604990 392 ntBASIC4.1□□□□□ -1.75
ITGA4P13612 AC027309.3-201ENST00000623419 351 ntBASIC4.1□□□□□ -1.75
ITGA4P13612 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC4.1□□□□□ -1.75
ITGA4P13612 AC009093.8-201ENST00000641769 292 ntBASIC4.1□□□□□ -1.75
ITGA4P13612 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
ITGA4P13612 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
ITGA4P13612 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
ITGA4P13612 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC4.09□□□□□ -1.75
ITGA4P13612 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
ITGA4P13612 RNU6-379P-201ENST00000363813 104 ntBASIC4.09□□□□□ -1.75
ITGA4P13612 RNA5SP189-201ENST00000364920 115 ntBASIC4.09□□□□□ -1.75
ITGA4P13612 Y_RNA.526-201ENST00000384572 110 ntBASIC4.09□□□□□ -1.75
ITGA4P13612 Y_RNA.551-201ENST00000384661 102 ntBASIC4.09□□□□□ -1.75
ITGA4P13612 MIR7-3-201ENST00000384898 110 ntBASIC4.09□□□□□ -1.75
ITGA4P13612 MIR628-201ENST00000385229 95 ntBASIC4.09□□□□□ -1.75
ITGA4P13612 MT-TR-201ENST00000387439 65 ntBASIC4.09□□□□□ -1.75
ITGA4P13612 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC4.09□□□□□ -1.75
ITGA4P13612 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC4.09□□□□□ -1.75
ITGA4P13612 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC4.09□□□□□ -1.75
ITGA4P13612 RPL30P5-201ENST00000494923 336 ntBASIC4.09□□□□□ -1.75
ITGA4P13612 AC104619.4-201ENST00000510773 249 ntBASIC4.09□□□□□ -1.75
ITGA4P13612 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC4.09□□□□□ -1.75
ITGA4P13612 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC4.09□□□□□ -1.75
ITGA4P13612 IGHV3-76-201ENST00000522465 295 ntBASIC4.09□□□□□ -1.75
ITGA4P13612 CYCSP39-201ENST00000565821 309 ntBASIC4.09□□□□□ -1.75
ITGA4P13612 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC4.09□□□□□ -1.75
ITGA4P13612 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC4.09□□□□□ -1.75
ITGA4P13612 AC090517.1-201ENST00000569307 266 ntBASIC4.09□□□□□ -1.75
ITGA4P13612 AC078899.3-201ENST00000599065 212 ntBASIC4.09□□□□□ -1.75
ITGA4P13612 SNORA62.6-201ENST00000606322 83 ntBASIC4.09□□□□□ -1.75
ITGA4P13612 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC4.09□□□□□ -1.75
ITGA4P13612 SCARNA4-202ENST00000625402 129 ntBASIC4.09□□□□□ -1.75
ITGA4P13612 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.09□□□□□ -1.75
ITGA4P13612 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC4.09□□□□□ -1.76
ITGA4P13612 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
ITGA4P13612 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
ITGA4P13612 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC4.08□□□□□ -1.76
ITGA4P13612 RNA5SP119-201ENST00000362715 117 ntBASIC4.08□□□□□ -1.76
ITGA4P13612 RNU6-227P-201ENST00000362865 103 ntBASIC4.08□□□□□ -1.76
ITGA4P13612 Y_RNA.214-201ENST00000364201 112 ntBASIC4.08□□□□□ -1.76
ITGA4P13612 Y_RNA.222-201ENST00000364264 102 ntBASIC4.08□□□□□ -1.76
ITGA4P13612 RNU4-50P-201ENST00000364361 141 ntBASIC4.08□□□□□ -1.76
ITGA4P13612 Y_RNA.276-201ENST00000364732 109 ntBASIC4.08□□□□□ -1.76
ITGA4P13612 Y_RNA.461-201ENST00000384263 103 ntBASIC4.08□□□□□ -1.76
ITGA4P13612 RNU6-472P-201ENST00000384299 107 ntBASIC4.08□□□□□ -1.76
ITGA4P13612 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC4.08□□□□□ -1.76
ITGA4P13612 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
ITGA4P13612 RPS29P13-201ENST00000402041 169 ntBASIC4.08□□□□□ -1.76
ITGA4P13612 RN7SKP177-201ENST00000410567 355 ntBASIC4.08□□□□□ -1.76
ITGA4P13612 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC4.08□□□□□ -1.76
ITGA4P13612 ELOCP20-201ENST00000422460 345 ntBASIC4.08□□□□□ -1.76
ITGA4P13612 SNORA71B-202ENST00000439232 272 ntBASIC4.08□□□□□ -1.76
ITGA4P13612 ST7-221ENST00000465133 2155 ntTSL 5 BASIC4.08□□□□□ -1.76
ITGA4P13612 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC4.08□□□□□ -1.76
ITGA4P13612 RPL30P10-201ENST00000488148 337 ntBASIC4.08□□□□□ -1.76
ITGA4P13612 TRBV12-2-201ENST00000489763 344 ntBASIC4.08□□□□□ -1.76
ITGA4P13612 RAC1P2-201ENST00000511164 579 ntBASIC4.08□□□□□ -1.76
ITGA4P13612 RN7SKP18-201ENST00000516005 275 ntBASIC4.08□□□□□ -1.76
ITGA4P13612 RNU6-397P-201ENST00000516226 104 ntBASIC4.08□□□□□ -1.76
ITGA4P13612 RNY3P15-201ENST00000516297 97 ntBASIC4.08□□□□□ -1.76
ITGA4P13612 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC4.08□□□□□ -1.76
ITGA4P13612 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.08□□□□□ -1.76
ITGA4P13612 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
ITGA4P13612 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC4.08□□□□□ -1.76
ITGA4P13612 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC4.08□□□□□ -1.76
ITGA4P13612 H3F3AP1-201ENST00000559984 334 ntBASIC4.08□□□□□ -1.76
ITGA4P13612 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC4.08□□□□□ -1.76
ITGA4P13612 MIR3944-201ENST00000581277 108 ntBASIC4.08□□□□□ -1.76
ITGA4P13612 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC4.08□□□□□ -1.76
ITGA4P13612 AC125232.2-201ENST00000592457 143 ntBASIC4.08□□□□□ -1.76
ITGA4P13612 AL391261.4-201ENST00000616012 481 ntBASIC4.08□□□□□ -1.76
ITGA4P13612 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
ITGA4P13612 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
ITGA4P13612 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
ITGA4P13612 AC118273.1-201ENST00000525324 3006 ntBASIC4.07□□□□□ -1.76
ITGA4P13612 Y_RNA.26-201ENST00000362539 101 ntBASIC4.07□□□□□ -1.76
ITGA4P13612 Y_RNA.123-201ENST00000363338 102 ntBASIC4.07□□□□□ -1.76
ITGA4P13612 RNA5SP51-201ENST00000364750 119 ntBASIC4.07□□□□□ -1.76
ITGA4P13612 RNA5SP167-201ENST00000365461 116 ntBASIC4.07□□□□□ -1.76
ITGA4P13612 Z98749.2-208ENST00000381646 500 ntBASIC4.07□□□□□ -1.76
ITGA4P13612 RNU6-658P-201ENST00000384606 106 ntBASIC4.07□□□□□ -1.76
ITGA4P13612 MIR708-201ENST00000390708 88 ntBASIC4.07□□□□□ -1.76
ITGA4P13612 Y_RNA.592-201ENST00000410274 109 ntBASIC4.07□□□□□ -1.76
ITGA4P13612 RNA5SP44-201ENST00000410446 133 ntBASIC4.07□□□□□ -1.76
ITGA4P13612 RNU6-847P-201ENST00000411115 108 ntBASIC4.07□□□□□ -1.76
ITGA4P13612 RNA5SP31-201ENST00000411144 127 ntBASIC4.07□□□□□ -1.76
ITGA4P13612 MTCO3P29-201ENST00000432119 779 ntBASIC4.07□□□□□ -1.76
ITGA4P13612 AC023141.12-201ENST00000512399 199 ntBASIC4.07□□□□□ -1.76
ITGA4P13612 SNORA25.11-201ENST00000515935 105 ntBASIC4.07□□□□□ -1.76
ITGA4P13612 RNU6-703P-201ENST00000516946 107 ntBASIC4.07□□□□□ -1.76
ITGA4P13612 IGKV2D-19-201ENST00000523346 262 ntBASIC4.07□□□□□ -1.76
ITGA4P13612 CASP1P1-201ENST00000526345 212 ntBASIC4.07□□□□□ -1.76
ITGA4P13612 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC4.07□□□□□ -1.76
ITGA4P13612 AL590705.4-201ENST00000532209 134 ntBASIC4.07□□□□□ -1.76
ITGA4P13612 SARNP-203ENST00000552080 726 ntTSL 2 BASIC4.07□□□□□ -1.76
ITGA4P13612 UBE2Q2P8-201ENST00000560644 102 ntBASIC4.07□□□□□ -1.76
ITGA4P13612 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC4.07□□□□□ -1.76
ITGA4P13612 AC006557.5-201ENST00000603126 811 ntBASIC4.07□□□□□ -1.76
ITGA4P13612 AL390123.1-201ENST00000603216 237 ntBASIC4.07□□□□□ -1.76
ITGA4P13612 AC008962.1-201ENST00000605729 304 ntBASIC4.07□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 117.4 ms