Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 AC026241.1-201ENST00000517873 2142 ntBASIC2.94□□□□□ -1.94
PCNAP12004 RNU6-323P-201ENST00000521915 107 ntBASIC2.94□□□□□ -1.94
PCNAP12004 SCOCP1-201ENST00000554676 349 ntBASIC2.94□□□□□ -1.94
PCNAP12004 LINC00933-203ENST00000559812 219 ntBASIC2.94□□□□□ -1.94
PCNAP12004 MIR3942-201ENST00000585264 109 ntBASIC2.94□□□□□ -1.94
PCNAP12004 AC011712.1-201ENST00000588959 234 ntBASIC2.94□□□□□ -1.94
PCNAP12004 RNU6-6P-201ENST00000606623 107 ntBASIC2.94□□□□□ -1.94
PCNAP12004 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
PCNAP12004 AC107871.2-201ENST00000612894 502 ntBASIC2.94□□□□□ -1.94
PCNAP12004 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
PCNAP12004 AC093913.1-201ENST00000614178 329 ntBASIC2.94□□□□□ -1.94
PCNAP12004 FAM157A-202ENST00000615155 405 ntBASIC2.94□□□□□ -1.94
PCNAP12004 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.94□□□□□ -1.94
PCNAP12004 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC2.94□□□□□ -1.94
PCNAP12004 AC108206.1-201ENST00000570186 4159 ntBASIC2.94□□□□□ -1.94
PCNAP12004 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
PCNAP12004 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
PCNAP12004 MTND5P1-201ENST00000445440 1375 ntBASIC2.93□□□□□ -1.94
PCNAP12004 SNORA63.1-201ENST00000362493 131 ntBASIC2.93□□□□□ -1.94
PCNAP12004 Y_RNA.480-201ENST00000384364 102 ntBASIC2.93□□□□□ -1.94
PCNAP12004 SNORD73A-201ENST00000386062 65 ntBASIC2.93□□□□□ -1.94
PCNAP12004 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
PCNAP12004 MORN2-203ENST00000409131 544 ntTSL 5 BASIC2.93□□□□□ -1.94
PCNAP12004 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC2.93□□□□□ -1.94
PCNAP12004 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC2.93□□□□□ -1.94
PCNAP12004 USP9YP20-201ENST00000419224 558 ntBASIC2.93□□□□□ -1.94
PCNAP12004 RPL7P12-201ENST00000446719 750 ntBASIC2.93□□□□□ -1.94
PCNAP12004 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC2.93□□□□□ -1.94
PCNAP12004 HMGN2P10-201ENST00000448085 265 ntBASIC2.93□□□□□ -1.94
PCNAP12004 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC2.93□□□□□ -1.94
PCNAP12004 AC092001.1-201ENST00000453012 261 ntBASIC2.93□□□□□ -1.94
PCNAP12004 HMGN1P12-201ENST00000499125 195 ntBASIC2.93□□□□□ -1.94
PCNAP12004 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC2.93□□□□□ -1.94
PCNAP12004 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC2.93□□□□□ -1.94
PCNAP12004 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC2.93□□□□□ -1.94
PCNAP12004 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC2.93□□□□□ -1.94
PCNAP12004 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC2.93□□□□□ -1.94
PCNAP12004 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC2.93□□□□□ -1.94
PCNAP12004 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC2.93□□□□□ -1.94
PCNAP12004 AC010620.2-201ENST00000600135 313 ntBASIC2.93□□□□□ -1.94
PCNAP12004 RNU6-85P-201ENST00000605989 107 ntBASIC2.93□□□□□ -1.94
PCNAP12004 HOTTIP_4.1-201ENST00000618195 165 ntBASIC2.93□□□□□ -1.94
PCNAP12004 AC010378.1-201ENST00000619270 362 ntBASIC2.93□□□□□ -1.94
PCNAP12004 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.93□□□□□ -1.94
PCNAP12004 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
PCNAP12004 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
PCNAP12004 ADAM3A-203ENST00000461344 2157 ntBASIC2.93□□□□□ -1.94
PCNAP12004 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC2.92□□□□□ -1.94
PCNAP12004 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.92□□□□□ -1.94
PCNAP12004 AC009487.2-201ENST00000420969 6821 ntBASIC2.92□□□□□ -1.94
PCNAP12004 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC2.92□□□□□ -1.94
PCNAP12004 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC2.92□□□□□ -1.94
PCNAP12004 MIR22-201ENST00000362190 85 ntBASIC2.92□□□□□ -1.94
PCNAP12004 RNU6-254P-201ENST00000363377 107 ntBASIC2.92□□□□□ -1.94
PCNAP12004 Y_RNA.414-201ENST00000384011 101 ntBASIC2.92□□□□□ -1.94
PCNAP12004 RNU6-72P-201ENST00000384285 79 ntBASIC2.92□□□□□ -1.94
PCNAP12004 Y_RNA.530-201ENST00000384587 101 ntBASIC2.92□□□□□ -1.94
PCNAP12004 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC2.92□□□□□ -1.94
PCNAP12004 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC2.92□□□□□ -1.94
PCNAP12004 BTF3P15-201ENST00000455606 336 ntBASIC2.92□□□□□ -1.94
PCNAP12004 BX510359.1-201ENST00000456973 237 ntBASIC2.92□□□□□ -1.94
PCNAP12004 RN7SL807P-201ENST00000470923 297 ntBASIC2.92□□□□□ -1.94
PCNAP12004 AC128713.1-201ENST00000471495 306 ntBASIC2.92□□□□□ -1.94
PCNAP12004 AC008628.2-201ENST00000502605 298 ntBASIC2.92□□□□□ -1.94
PCNAP12004 RN7SKP43-201ENST00000516173 320 ntBASIC2.92□□□□□ -1.94
PCNAP12004 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC2.92□□□□□ -1.94
PCNAP12004 CYCSP27-201ENST00000527643 293 ntBASIC2.92□□□□□ -1.94
PCNAP12004 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.92□□□□□ -1.94
PCNAP12004 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
PCNAP12004 APAF1-207ENST00000547743 651 ntTSL 3 BASIC2.92□□□□□ -1.94
PCNAP12004 AC006199.1-201ENST00000548728 219 ntBASIC2.92□□□□□ -1.94
PCNAP12004 AC025423.5-201ENST00000550230 219 ntBASIC2.92□□□□□ -1.94
PCNAP12004 AL121821.2-201ENST00000556081 394 ntBASIC2.92□□□□□ -1.94
PCNAP12004 AC021739.1-201ENST00000559631 174 ntBASIC2.92□□□□□ -1.94
PCNAP12004 AC026464.5-201ENST00000562497 722 ntBASIC2.92□□□□□ -1.94
PCNAP12004 MIR3941-201ENST00000582572 103 ntBASIC2.92□□□□□ -1.94
PCNAP12004 AC005261.5-201ENST00000596280 355 ntBASIC2.92□□□□□ -1.94
PCNAP12004 AL359198.2-201ENST00000611836 194 ntBASIC2.92□□□□□ -1.94
PCNAP12004 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC2.92□□□□□ -1.94
PCNAP12004 USP12-203ENST00000620323 349 ntTSL 3 BASIC2.92□□□□□ -1.94
PCNAP12004 AC092794.2-201ENST00000620933 563 ntBASIC2.92□□□□□ -1.94
PCNAP12004 AC138627.2-201ENST00000624202 601 ntBASIC2.92□□□□□ -1.94
PCNAP12004 MIR622-201ENST00000638396 96 ntBASIC2.92□□□□□ -1.94
PCNAP12004 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC2.92□□□□□ -1.94
PCNAP12004 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
PCNAP12004 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
PCNAP12004 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
PCNAP12004 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
PCNAP12004 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC2.91□□□□□ -1.94
PCNAP12004 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
PCNAP12004 Y_RNA.72-201ENST00000362894 103 ntBASIC2.91□□□□□ -1.94
PCNAP12004 Y_RNA.100-201ENST00000363141 102 ntBASIC2.91□□□□□ -1.94
PCNAP12004 RNU6-767P-201ENST00000384132 107 ntBASIC2.91□□□□□ -1.94
PCNAP12004 MIR34A-201ENST00000385130 110 ntBASIC2.91□□□□□ -1.94
PCNAP12004 MIR450B-201ENST00000401182 78 ntBASIC2.91□□□□□ -1.94
PCNAP12004 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC2.91□□□□□ -1.94
PCNAP12004 AL513477.1-202ENST00000417061 214 ntBASIC2.91□□□□□ -1.94
PCNAP12004 RPL35AP12-201ENST00000425362 338 ntBASIC2.91□□□□□ -1.94
PCNAP12004 AL365496.1-201ENST00000426885 215 ntBASIC2.91□□□□□ -1.94
PCNAP12004 AC009414.1-201ENST00000427200 443 ntBASIC2.91□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 96.6 ms