Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 AC006338.1-201ENST00000618453 749 ntBASIC1.5□□□□□ -2.17
TPM1P09493 AC002543.1-201ENST00000299783 1954 ntBASIC1.5□□□□□ -2.17
TPM1P09493 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.5□□□□□ -2.17
TPM1P09493 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.49□□□□□ -2.17
TPM1P09493 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
TPM1P09493 NF1-214ENST00000490416 1329 ntTSL 3 BASIC1.49□□□□□ -2.17
TPM1P09493 Y_RNA.33-201ENST00000362591 102 ntBASIC1.49□□□□□ -2.17
TPM1P09493 RNU6-60P-201ENST00000364792 103 ntBASIC1.49□□□□□ -2.17
TPM1P09493 RNU6-622P-201ENST00000384272 103 ntBASIC1.49□□□□□ -2.17
TPM1P09493 RNU1-78P-201ENST00000391248 165 ntBASIC1.49□□□□□ -2.17
TPM1P09493 SNORA26.9-201ENST00000391322 122 ntBASIC1.49□□□□□ -2.17
TPM1P09493 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC1.49□□□□□ -2.17
TPM1P09493 AC009518.2-201ENST00000418056 731 ntBASIC1.49□□□□□ -2.17
TPM1P09493 AL591212.2-201ENST00000433923 257 ntBASIC1.49□□□□□ -2.17
TPM1P09493 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC1.49□□□□□ -2.17
TPM1P09493 FDX1P2-201ENST00000450769 375 ntBASIC1.49□□□□□ -2.17
TPM1P09493 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC1.49□□□□□ -2.17
TPM1P09493 HMGB1P30-201ENST00000492455 606 ntBASIC1.49□□□□□ -2.17
TPM1P09493 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC1.49□□□□□ -2.17
TPM1P09493 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC1.49□□□□□ -2.17
TPM1P09493 RNU6-965P-201ENST00000516721 96 ntBASIC1.49□□□□□ -2.17
TPM1P09493 RNU6-914P-201ENST00000516749 109 ntBASIC1.49□□□□□ -2.17
TPM1P09493 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC1.49□□□□□ -2.17
TPM1P09493 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC1.49□□□□□ -2.17
TPM1P09493 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC1.49□□□□□ -2.17
TPM1P09493 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.49□□□□□ -2.17
TPM1P09493 AC092325.1-201ENST00000566449 554 ntBASIC1.49□□□□□ -2.17
TPM1P09493 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC1.49□□□□□ -2.17
TPM1P09493 AP001485.1-201ENST00000604799 199 ntBASIC1.49□□□□□ -2.17
TPM1P09493 AC084824.5-201ENST00000612009 413 ntBASIC1.49□□□□□ -2.17
TPM1P09493 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC1.48□□□□□ -2.17
TPM1P09493 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.48□□□□□ -2.17
TPM1P09493 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
TPM1P09493 Y_RNA.110-201ENST00000363220 99 ntBASIC1.48□□□□□ -2.17
TPM1P09493 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
TPM1P09493 MIR29B2-201ENST00000385055 81 ntBASIC1.48□□□□□ -2.17
TPM1P09493 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC1.48□□□□□ -2.17
TPM1P09493 PTENP1-201ENST00000447117 1215 ntBASIC1.48□□□□□ -2.17
TPM1P09493 AC119751.5-201ENST00000514077 770 ntBASIC1.48□□□□□ -2.17
TPM1P09493 RN7SKP179-201ENST00000516126 217 ntBASIC1.48□□□□□ -2.17
TPM1P09493 CR383656.8-201ENST00000549046 145 ntBASIC1.48□□□□□ -2.17
TPM1P09493 SUB1P3-201ENST00000564581 315 ntBASIC1.48□□□□□ -2.17
TPM1P09493 MTCYBP33-201ENST00000575007 1130 ntBASIC1.48□□□□□ -2.17
TPM1P09493 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC1.48□□□□□ -2.17
TPM1P09493 AC022893.3-201ENST00000607665 437 ntBASIC1.48□□□□□ -2.17
TPM1P09493 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC1.48□□□□□ -2.17
TPM1P09493 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC1.48□□□□□ -2.17
TPM1P09493 ANKRD20A9P-201ENST00000457997 2978 ntBASIC1.47□□□□□ -2.17
TPM1P09493 RNU6-942P-201ENST00000363002 107 ntBASIC1.47□□□□□ -2.17
TPM1P09493 RNA5SP190-201ENST00000365222 118 ntBASIC1.47□□□□□ -2.17
TPM1P09493 SNORD26-201ENST00000384147 75 ntBASIC1.47□□□□□ -2.17
TPM1P09493 RNU2-23P-201ENST00000410545 195 ntBASIC1.47□□□□□ -2.17
TPM1P09493 VPS26BP1-201ENST00000417155 755 ntBASIC1.47□□□□□ -2.17
TPM1P09493 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC1.47□□□□□ -2.17
TPM1P09493 AL035666.1-201ENST00000446195 348 ntBASIC1.47□□□□□ -2.17
TPM1P09493 snoU13.9-201ENST00000458927 103 ntBASIC1.47□□□□□ -2.17
TPM1P09493 snoU13.14-201ENST00000459372 104 ntBASIC1.47□□□□□ -2.17
TPM1P09493 SUMO2P5-201ENST00000506790 245 ntBASIC1.47□□□□□ -2.17
TPM1P09493 MTCYBP40-201ENST00000509390 1135 ntBASIC1.47□□□□□ -2.17
TPM1P09493 AC093259.1-201ENST00000509755 300 ntBASIC1.47□□□□□ -2.17
TPM1P09493 AC025465.3-201ENST00000510570 311 ntBASIC1.47□□□□□ -2.17
TPM1P09493 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC1.47□□□□□ -2.17
TPM1P09493 AP003034.1-201ENST00000534621 422 ntBASIC1.47□□□□□ -2.17
TPM1P09493 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC1.47□□□□□ -2.17
TPM1P09493 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC1.47□□□□□ -2.17
TPM1P09493 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.47□□□□□ -2.17
TPM1P09493 AC021755.4-201ENST00000616620 456 ntBASIC1.47□□□□□ -2.17
TPM1P09493 AL589994.2-201ENST00000621124 579 ntBASIC1.47□□□□□ -2.17
TPM1P09493 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
TPM1P09493 Y_RNA.40-201ENST00000362645 93 ntBASIC1.46□□□□□ -2.18
TPM1P09493 Y_RNA.111-201ENST00000363248 100 ntBASIC1.46□□□□□ -2.18
TPM1P09493 RNU6-395P-201ENST00000365662 106 ntBASIC1.46□□□□□ -2.18
TPM1P09493 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.18
TPM1P09493 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC1.46□□□□□ -2.18
TPM1P09493 RNU6-413P-201ENST00000384115 107 ntBASIC1.46□□□□□ -2.18
TPM1P09493 MIR1305-201ENST00000408300 86 ntBASIC1.46□□□□□ -2.18
TPM1P09493 NCOR1P3-201ENST00000420479 303 ntBASIC1.46□□□□□ -2.18
TPM1P09493 HMGB3P12-201ENST00000438745 556 ntBASIC1.46□□□□□ -2.18
TPM1P09493 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC1.46□□□□□ -2.18
TPM1P09493 AC007327.1-201ENST00000447461 264 ntBASIC1.46□□□□□ -2.18
TPM1P09493 SNORD97-201ENST00000459187 142 ntBASIC1.46□□□□□ -2.18
TPM1P09493 AHI1-208ENST00000488690 712 ntTSL 5 BASIC1.46□□□□□ -2.18
TPM1P09493 RNU6-677P-201ENST00000516914 101 ntBASIC1.46□□□□□ -2.18
TPM1P09493 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC1.46□□□□□ -2.18
TPM1P09493 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC1.46□□□□□ -2.18
TPM1P09493 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC1.46□□□□□ -2.18
TPM1P09493 AC097468.3-201ENST00000607956 456 ntBASIC1.46□□□□□ -2.18
TPM1P09493 AL355472.4-201ENST00000610233 626 ntBASIC1.46□□□□□ -2.18
TPM1P09493 RNU6-1192P-201ENST00000612197 107 ntBASIC1.46□□□□□ -2.18
TPM1P09493 RNU6-489P-201ENST00000618289 107 ntBASIC1.46□□□□□ -2.18
TPM1P09493 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
TPM1P09493 ZNF72P-201ENST00000425869 1908 ntBASIC1.45□□□□□ -2.18
TPM1P09493 RNU6-23P-201ENST00000363283 107 ntBASIC1.45□□□□□ -2.18
TPM1P09493 RNU6-743P-201ENST00000364151 106 ntBASIC1.45□□□□□ -2.18
TPM1P09493 SMIM11P1-201ENST00000369586 178 ntBASIC1.45□□□□□ -2.18
TPM1P09493 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC1.45□□□□□ -2.18
TPM1P09493 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC1.45□□□□□ -2.18
TPM1P09493 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC1.45□□□□□ -2.18
TPM1P09493 AL365338.1-201ENST00000422282 858 ntBASIC1.45□□□□□ -2.18
TPM1P09493 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC1.45□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms