Protein–RNA interactions for Protein: P08253

MMP2, 72 kDa type IV collagenase, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP2P08253 SNORA20.3-201ENST00000516880 132 ntBASIC2.92□□□□□ -1.94
MMP2P08253 RNU6-56P-201ENST00000516986 93 ntBASIC2.92□□□□□ -1.94
MMP2P08253 RNU6-1314P-201ENST00000517139 104 ntBASIC2.92□□□□□ -1.94
MMP2P08253 SNORA25.17-201ENST00000517184 124 ntBASIC2.92□□□□□ -1.94
MMP2P08253 RNA5SP380-201ENST00000517190 98 ntBASIC2.92□□□□□ -1.94
MMP2P08253 SNORA31.26-201ENST00000517250 137 ntBASIC2.92□□□□□ -1.94
MMP2P08253 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC2.92□□□□□ -1.94
MMP2P08253 LINC00933-203ENST00000559812 219 ntBASIC2.92□□□□□ -1.94
MMP2P08253 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC2.92□□□□□ -1.94
MMP2P08253 MIR3941-201ENST00000582572 103 ntBASIC2.92□□□□□ -1.94
MMP2P08253 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.92□□□□□ -1.94
MMP2P08253 AC011712.1-201ENST00000588959 234 ntBASIC2.92□□□□□ -1.94
MMP2P08253 AC019159.1-201ENST00000605094 187 ntBASIC2.92□□□□□ -1.94
MMP2P08253 CTHRC1P1-201ENST00000605383 469 ntBASIC2.92□□□□□ -1.94
MMP2P08253 AL121757.2-201ENST00000611223 313 ntBASIC2.92□□□□□ -1.94
MMP2P08253 AC093913.1-201ENST00000614178 329 ntBASIC2.92□□□□□ -1.94
MMP2P08253 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC2.92□□□□□ -1.94
MMP2P08253 AC002064.3-201ENST00000623448 346 ntBASIC2.92□□□□□ -1.94
MMP2P08253 MTND5P27-201ENST00000428871 1720 ntBASIC2.92□□□□□ -1.94
MMP2P08253 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC2.92□□□□□ -1.94
MMP2P08253 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
MMP2P08253 AC000403.1-201ENST00000613696 3585 ntBASIC2.92□□□□□ -1.94
MMP2P08253 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC2.92□□□□□ -1.94
MMP2P08253 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.91□□□□□ -1.94
MMP2P08253 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.91□□□□□ -1.94
MMP2P08253 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC2.91□□□□□ -1.94
MMP2P08253 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
MMP2P08253 Y_RNA.72-201ENST00000362894 103 ntBASIC2.91□□□□□ -1.94
MMP2P08253 U3.12-201ENST00000364498 214 ntBASIC2.91□□□□□ -1.94
MMP2P08253 RNU1-140P-201ENST00000365040 165 ntBASIC2.91□□□□□ -1.94
MMP2P08253 RNU6-898P-201ENST00000365627 104 ntBASIC2.91□□□□□ -1.94
MMP2P08253 SNORD21-201ENST00000383953 95 ntBASIC2.91□□□□□ -1.94
MMP2P08253 EIF4E2P1-201ENST00000393781 255 ntBASIC2.91□□□□□ -1.94
MMP2P08253 UBA52P6-201ENST00000399822 382 ntBASIC2.91□□□□□ -1.94
MMP2P08253 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC2.91□□□□□ -1.94
MMP2P08253 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC2.91□□□□□ -1.94
MMP2P08253 RPL21P111-201ENST00000418453 477 ntBASIC2.91□□□□□ -1.94
MMP2P08253 BPY2DP-201ENST00000422208 265 ntBASIC2.91□□□□□ -1.94
MMP2P08253 AL513185.2-201ENST00000425543 193 ntBASIC2.91□□□□□ -1.94
MMP2P08253 TOMM20P4-201ENST00000427861 435 ntBASIC2.91□□□□□ -1.94
MMP2P08253 Z96811.1-201ENST00000445880 108 ntBASIC2.91□□□□□ -1.94
MMP2P08253 MTND3P10-201ENST00000450967 341 ntBASIC2.91□□□□□ -1.94
MMP2P08253 snoU109.2-201ENST00000459316 135 ntBASIC2.91□□□□□ -1.94
MMP2P08253 AP000852.1-201ENST00000472460 573 ntBASIC2.91□□□□□ -1.94
MMP2P08253 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC2.91□□□□□ -1.94
MMP2P08253 FAM206BP-201ENST00000510179 541 ntBASIC2.91□□□□□ -1.94
MMP2P08253 SNORA19.2-201ENST00000516013 114 ntBASIC2.91□□□□□ -1.94
MMP2P08253 AL121579.1-201ENST00000555129 305 ntBASIC2.91□□□□□ -1.94
MMP2P08253 PSMA3P-201ENST00000555485 635 ntBASIC2.91□□□□□ -1.94
MMP2P08253 AL136221.1-201ENST00000621449 509 ntBASIC2.91□□□□□ -1.94
MMP2P08253 MAPK10-266ENST00000641066 6555 ntBASIC2.91□□□□□ -1.94
MMP2P08253 AC121333.1-201ENST00000567488 2709 ntBASIC2.9□□□□□ -1.95
MMP2P08253 SNORA72.1-201ENST00000363485 129 ntBASIC2.9□□□□□ -1.95
MMP2P08253 RNU6-851P-201ENST00000384565 107 ntBASIC2.9□□□□□ -1.95
MMP2P08253 Y_RNA.530-201ENST00000384587 101 ntBASIC2.9□□□□□ -1.95
MMP2P08253 MIR34A-201ENST00000385130 110 ntBASIC2.9□□□□□ -1.95
MMP2P08253 EEF1A1P41-201ENST00000414667 207 ntBASIC2.9□□□□□ -1.95
MMP2P08253 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC2.9□□□□□ -1.95
MMP2P08253 AL451074.5-201ENST00000415894 435 ntBASIC2.9□□□□□ -1.95
MMP2P08253 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC2.9□□□□□ -1.95
MMP2P08253 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC2.9□□□□□ -1.95
MMP2P08253 AC098831.1-201ENST00000440661 216 ntBASIC2.9□□□□□ -1.95
MMP2P08253 AC117503.1-201ENST00000472241 394 ntBASIC2.9□□□□□ -1.95
MMP2P08253 AC026801.1-201ENST00000497178 464 ntBASIC2.9□□□□□ -1.95
MMP2P08253 AC083906.5-201ENST00000503722 328 ntBASIC2.9□□□□□ -1.95
MMP2P08253 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC2.9□□□□□ -1.95
MMP2P08253 AC079140.5-201ENST00000507882 310 ntBASIC2.9□□□□□ -1.95
MMP2P08253 SCGB1D5P-201ENST00000515134 247 ntBASIC2.9□□□□□ -1.95
MMP2P08253 AC090136.1-201ENST00000520009 240 ntBASIC2.9□□□□□ -1.95
MMP2P08253 AC107953.1-201ENST00000522216 297 ntBASIC2.9□□□□□ -1.95
MMP2P08253 CYCSP27-201ENST00000527643 293 ntBASIC2.9□□□□□ -1.95
MMP2P08253 AC022080.3-201ENST00000544433 482 ntBASIC2.9□□□□□ -1.95
MMP2P08253 APAF1-207ENST00000547743 651 ntTSL 3 BASIC2.9□□□□□ -1.95
MMP2P08253 AC005730.3-201ENST00000583067 366 ntBASIC2.9□□□□□ -1.95
MMP2P08253 AL451007.1-201ENST00000595491 289 ntBASIC2.9□□□□□ -1.95
MMP2P08253 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC2.9□□□□□ -1.95
MMP2P08253 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC2.9□□□□□ -1.95
MMP2P08253 ADAM3A-203ENST00000461344 2157 ntBASIC2.9□□□□□ -1.95
MMP2P08253 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC2.9□□□□□ -1.95
MMP2P08253 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
MMP2P08253 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.89□□□□□ -1.95
MMP2P08253 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
MMP2P08253 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
MMP2P08253 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC2.89□□□□□ -1.95
MMP2P08253 CBX3P1-201ENST00000325243 554 ntBASIC2.89□□□□□ -1.95
MMP2P08253 RNU6-1252P-201ENST00000363054 104 ntBASIC2.89□□□□□ -1.95
MMP2P08253 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC2.89□□□□□ -1.95
MMP2P08253 MIR767-201ENST00000390228 109 ntBASIC2.89□□□□□ -1.95
MMP2P08253 Z92545.1-201ENST00000411782 234 ntBASIC2.89□□□□□ -1.95
MMP2P08253 AC016831.2-201ENST00000417179 352 ntBASIC2.89□□□□□ -1.95
MMP2P08253 USP9YP20-201ENST00000419224 558 ntBASIC2.89□□□□□ -1.95
MMP2P08253 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC2.89□□□□□ -1.95
MMP2P08253 RPL7P12-201ENST00000446719 750 ntBASIC2.89□□□□□ -1.95
MMP2P08253 NIPA2P5-201ENST00000452282 464 ntBASIC2.89□□□□□ -1.95
MMP2P08253 BTF3P15-201ENST00000455606 336 ntBASIC2.89□□□□□ -1.95
MMP2P08253 PMCHL2-203ENST00000457791 237 ntBASIC2.89□□□□□ -1.95
MMP2P08253 RNU6-1069P-201ENST00000516612 133 ntBASIC2.89□□□□□ -1.95
MMP2P08253 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC2.89□□□□□ -1.95
MMP2P08253 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC2.89□□□□□ -1.95
MMP2P08253 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC2.89□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 109.6 ms