Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 AC009487.4-201ENST00000624969 3585 ntBASIC2.02□□□□□ -2.09
RETP07949 AC110491.1-201ENST00000562191 2010 ntBASIC2.02□□□□□ -2.09
RETP07949 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC2.02□□□□□ -2.09
RETP07949 Y_RNA.122-201ENST00000363331 96 ntBASIC2.02□□□□□ -2.09
RETP07949 RNY4P16-201ENST00000364768 94 ntBASIC2.02□□□□□ -2.09
RETP07949 RNU6-658P-201ENST00000384606 106 ntBASIC2.02□□□□□ -2.09
RETP07949 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
RETP07949 RNU2-36P-201ENST00000410361 191 ntBASIC2.02□□□□□ -2.09
RETP07949 RNU2-68P-201ENST00000410878 191 ntBASIC2.02□□□□□ -2.09
RETP07949 RNA5SP270-201ENST00000411361 118 ntBASIC2.02□□□□□ -2.09
RETP07949 ELOCP17-201ENST00000414751 326 ntBASIC2.02□□□□□ -2.09
RETP07949 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC2.02□□□□□ -2.09
RETP07949 AC104651.1-201ENST00000427559 735 ntBASIC2.02□□□□□ -2.09
RETP07949 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC2.02□□□□□ -2.09
RETP07949 AC098831.1-201ENST00000440661 216 ntBASIC2.02□□□□□ -2.09
RETP07949 MTND4P25-201ENST00000441039 533 ntBASIC2.02□□□□□ -2.09
RETP07949 RPL23AP7-203ENST00000449021 469 ntBASIC2.02□□□□□ -2.09
RETP07949 AL118520.1-201ENST00000450770 291 ntBASIC2.02□□□□□ -2.09
RETP07949 AC104564.1-201ENST00000493028 407 ntBASIC2.02□□□□□ -2.09
RETP07949 AC005840.1-201ENST00000498412 377 ntBASIC2.02□□□□□ -2.09
RETP07949 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC2.02□□□□□ -2.09
RETP07949 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC2.02□□□□□ -2.09
RETP07949 SNORA31.6-201ENST00000516241 130 ntBASIC2.02□□□□□ -2.09
RETP07949 RNU2-44P-201ENST00000516795 194 ntBASIC2.02□□□□□ -2.09
RETP07949 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC2.02□□□□□ -2.09
RETP07949 AP003181.2-201ENST00000528941 181 ntBASIC2.02□□□□□ -2.09
RETP07949 AP003122.4-201ENST00000530980 758 ntBASIC2.02□□□□□ -2.09
RETP07949 AL356057.1-201ENST00000533798 831 ntBASIC2.02□□□□□ -2.09
RETP07949 ARL2BPP2-201ENST00000550907 489 ntBASIC2.02□□□□□ -2.09
RETP07949 RPL21P5-201ENST00000554662 472 ntBASIC2.02□□□□□ -2.09
RETP07949 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC2.02□□□□□ -2.09
RETP07949 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC2.02□□□□□ -2.09
RETP07949 AC073544.2-201ENST00000601155 540 ntBASIC2.02□□□□□ -2.09
RETP07949 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC2.02□□□□□ -2.09
RETP07949 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC2.02□□□□□ -2.09
RETP07949 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC2.02□□□□□ -2.09
RETP07949 Z69908.1-201ENST00000622603 247 ntBASIC2.02□□□□□ -2.09
RETP07949 AC099654.13-201ENST00000639774 207 ntBASIC2.02□□□□□ -2.09
RETP07949 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.02□□□□□ -2.09
RETP07949 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
RETP07949 AC010889.1-201ENST00000566193 2666 ntBASIC2.02□□□□□ -2.09
RETP07949 FGF7P2-201ENST00000332473 296 ntBASIC2.01□□□□□ -2.09
RETP07949 HSPE1P11-201ENST00000339579 310 ntBASIC2.01□□□□□ -2.09
RETP07949 RNU6-1284P-201ENST00000363701 100 ntBASIC2.01□□□□□ -2.09
RETP07949 RNU6-457P-201ENST00000363999 107 ntBASIC2.01□□□□□ -2.09
RETP07949 RNA5SP138-201ENST00000365098 114 ntBASIC2.01□□□□□ -2.09
RETP07949 MIR489-201ENST00000384923 84 ntBASIC2.01□□□□□ -2.09
RETP07949 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
RETP07949 RNU6-220P-201ENST00000390919 107 ntBASIC2.01□□□□□ -2.09
RETP07949 MRPL42P2-201ENST00000403169 426 ntBASIC2.01□□□□□ -2.09
RETP07949 RNA5SP338-201ENST00000410495 85 ntBASIC2.01□□□□□ -2.09
RETP07949 NDUFS5P4-201ENST00000412983 318 ntBASIC2.01□□□□□ -2.09
RETP07949 AC096649.2-201ENST00000416186 393 ntBASIC2.01□□□□□ -2.09
RETP07949 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC2.01□□□□□ -2.09
RETP07949 AC006366.1-201ENST00000422002 759 ntBASIC2.01□□□□□ -2.09
RETP07949 AL445685.2-201ENST00000422551 342 ntBASIC2.01□□□□□ -2.09
RETP07949 TRIM60P10Y-201ENST00000425589 751 ntBASIC2.01□□□□□ -2.09
RETP07949 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC2.01□□□□□ -2.09
RETP07949 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC2.01□□□□□ -2.09
RETP07949 AC092473.1-201ENST00000441098 221 ntBASIC2.01□□□□□ -2.09
RETP07949 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC2.01□□□□□ -2.09
RETP07949 MTND2P22-201ENST00000444325 1033 ntBASIC2.01□□□□□ -2.09
RETP07949 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC2.01□□□□□ -2.09
RETP07949 SSXP1-201ENST00000453640 473 ntBASIC2.01□□□□□ -2.09
RETP07949 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC2.01□□□□□ -2.09
RETP07949 RPL23AP63-201ENST00000498752 471 ntBASIC2.01□□□□□ -2.09
RETP07949 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC2.01□□□□□ -2.09
RETP07949 MRPS17P9-201ENST00000511924 393 ntBASIC2.01□□□□□ -2.09
RETP07949 AC091965.2-201ENST00000512324 613 ntBASIC2.01□□□□□ -2.09
RETP07949 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC2.01□□□□□ -2.09
RETP07949 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC2.01□□□□□ -2.09
RETP07949 AC024619.4-201ENST00000580924 316 ntBASIC2.01□□□□□ -2.09
RETP07949 HMGN1P30-201ENST00000589286 268 ntBASIC2.01□□□□□ -2.09
RETP07949 AC007363.1-201ENST00000604736 620 ntBASIC2.01□□□□□ -2.09
RETP07949 Y_RNA.783-201ENST00000613546 102 ntBASIC2.01□□□□□ -2.09
RETP07949 AC091834.1-201ENST00000614543 472 ntBASIC2.01□□□□□ -2.09
RETP07949 AL158063.1-201ENST00000615349 536 ntBASIC2.01□□□□□ -2.09
RETP07949 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC2.01□□□□□ -2.09
RETP07949 AC006338.1-201ENST00000618453 749 ntBASIC2.01□□□□□ -2.09
RETP07949 AL589994.2-201ENST00000621124 579 ntBASIC2.01□□□□□ -2.09
RETP07949 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC2.01□□□□□ -2.09
RETP07949 AL603839.4-201ENST00000624658 1005 ntBASIC2.01□□□□□ -2.09
RETP07949 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC2.01□□□□□ -2.09
RETP07949 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
RETP07949 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC2□□□□□ -2.09
RETP07949 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC2□□□□□ -2.09
RETP07949 Y_RNA.77-201ENST00000362962 107 ntBASIC2□□□□□ -2.09
RETP07949 RNA5SP190-201ENST00000365222 118 ntBASIC2□□□□□ -2.09
RETP07949 SNORD116-9-201ENST00000384000 95 ntBASIC2□□□□□ -2.09
RETP07949 SNORD116-3-201ENST00000384287 95 ntBASIC2□□□□□ -2.09
RETP07949 SNORD116-7-201ENST00000384404 95 ntBASIC2□□□□□ -2.09
RETP07949 SNORD116-5-201ENST00000384462 95 ntBASIC2□□□□□ -2.09
RETP07949 MIR218-1-201ENST00000384999 110 ntBASIC2□□□□□ -2.09
RETP07949 RN7SKP142-201ENST00000411236 328 ntBASIC2□□□□□ -2.09
RETP07949 HMGN1P14-201ENST00000412459 517 ntBASIC2□□□□□ -2.09
RETP07949 RPS15AP12-201ENST00000419498 388 ntBASIC2□□□□□ -2.09
RETP07949 AL109913.1-201ENST00000421173 514 ntBASIC2□□□□□ -2.09
RETP07949 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC2□□□□□ -2.09
RETP07949 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC2□□□□□ -2.09
RETP07949 NEFMP1-201ENST00000443423 1006 ntBASIC2□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 120 ms