Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 RNU6-843P-201ENST00000384454 104 ntBASIC1.28□□□□□ -2.2
TPM3P06753 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
TPM3P06753 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
TPM3P06753 MRPL35P3-201ENST00000421557 364 ntBASIC1.28□□□□□ -2.2
TPM3P06753 AC092648.1-201ENST00000425870 423 ntBASIC1.28□□□□□ -2.2
TPM3P06753 MTCO3P5-201ENST00000433620 714 ntBASIC1.28□□□□□ -2.2
TPM3P06753 MTND4P25-201ENST00000441039 533 ntBASIC1.28□□□□□ -2.2
TPM3P06753 AP000542.1-201ENST00000448473 371 ntBASIC1.28□□□□□ -2.2
TPM3P06753 FDX1P2-201ENST00000450769 375 ntBASIC1.28□□□□□ -2.2
TPM3P06753 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC1.28□□□□□ -2.2
TPM3P06753 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
TPM3P06753 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC1.28□□□□□ -2.2
TPM3P06753 RNU6-965P-201ENST00000516721 96 ntBASIC1.28□□□□□ -2.2
TPM3P06753 AP000873.5-201ENST00000533906 236 ntBASIC1.28□□□□□ -2.2
TPM3P06753 AC023043.2-201ENST00000589678 1026 ntBASIC1.28□□□□□ -2.2
TPM3P06753 BNIP3P30-201ENST00000601184 574 ntBASIC1.28□□□□□ -2.2
TPM3P06753 AC123912.5-201ENST00000605470 343 ntBASIC1.28□□□□□ -2.2
TPM3P06753 AC099785.1-201ENST00000605697 437 ntBASIC1.28□□□□□ -2.2
TPM3P06753 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC1.28□□□□□ -2.2
TPM3P06753 NF1-214ENST00000490416 1329 ntTSL 3 BASIC1.28□□□□□ -2.2
TPM3P06753 SNORA22-201ENST00000383907 134 ntBASIC1.27□□□□□ -2.21
TPM3P06753 RNU6-701P-201ENST00000384059 107 ntBASIC1.27□□□□□ -2.21
TPM3P06753 SNORA22C-201ENST00000384614 134 ntBASIC1.27□□□□□ -2.21
TPM3P06753 MIR301A-201ENST00000385261 86 ntBASIC1.27□□□□□ -2.21
TPM3P06753 RPS12P24-201ENST00000412619 387 ntBASIC1.27□□□□□ -2.21
TPM3P06753 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC1.27□□□□□ -2.21
TPM3P06753 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC1.27□□□□□ -2.21
TPM3P06753 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC1.27□□□□□ -2.21
TPM3P06753 NEFMP1-201ENST00000443423 1006 ntBASIC1.27□□□□□ -2.21
TPM3P06753 RPS26P55-201ENST00000471178 356 ntBASIC1.27□□□□□ -2.21
TPM3P06753 MTCYBP40-201ENST00000509390 1135 ntBASIC1.27□□□□□ -2.21
TPM3P06753 AC093259.1-201ENST00000509755 300 ntBASIC1.27□□□□□ -2.21
TPM3P06753 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC1.27□□□□□ -2.21
TPM3P06753 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC1.27□□□□□ -2.21
TPM3P06753 SUB1P4-201ENST00000566062 339 ntBASIC1.27□□□□□ -2.21
TPM3P06753 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC1.27□□□□□ -2.21
TPM3P06753 AC005776.1-201ENST00000603164 290 ntBASIC1.27□□□□□ -2.21
TPM3P06753 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.27□□□□□ -2.21
TPM3P06753 AC103810.9-201ENST00000606688 112 ntBASIC1.27□□□□□ -2.21
TPM3P06753 AL512643.1-201ENST00000635735 524 ntBASIC1.27□□□□□ -2.21
TPM3P06753 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC1.27□□□□□ -2.21
TPM3P06753 RNU6-23P-201ENST00000363283 107 ntBASIC1.26□□□□□ -2.21
TPM3P06753 RNU6-1210P-201ENST00000363775 107 ntBASIC1.26□□□□□ -2.21
TPM3P06753 CBX3P9-201ENST00000402326 552 ntBASIC1.26□□□□□ -2.21
TPM3P06753 UBE2V1P10-201ENST00000414685 269 ntBASIC1.26□□□□□ -2.21
TPM3P06753 OR6C66P-201ENST00000414917 930 ntBASIC1.26□□□□□ -2.21
TPM3P06753 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC1.26□□□□□ -2.21
TPM3P06753 AC083875.1-201ENST00000419509 405 ntBASIC1.26□□□□□ -2.21
TPM3P06753 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC1.26□□□□□ -2.21
TPM3P06753 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC1.26□□□□□ -2.21
TPM3P06753 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC1.26□□□□□ -2.21
TPM3P06753 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC1.26□□□□□ -2.21
TPM3P06753 snoU13.15-201ENST00000459407 104 ntBASIC1.26□□□□□ -2.21
TPM3P06753 AC087477.1-201ENST00000465747 340 ntBASIC1.26□□□□□ -2.21
TPM3P06753 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC1.26□□□□□ -2.21
TPM3P06753 AC108729.1-201ENST00000487812 947 ntBASIC1.26□□□□□ -2.21
TPM3P06753 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC1.26□□□□□ -2.21
TPM3P06753 RNU6-548P-201ENST00000517083 115 ntBASIC1.26□□□□□ -2.21
TPM3P06753 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC1.26□□□□□ -2.21
TPM3P06753 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC1.26□□□□□ -2.21
TPM3P06753 MIR4421-201ENST00000578133 69 ntBASIC1.26□□□□□ -2.21
TPM3P06753 SNORA77B-201ENST00000578179 125 ntBASIC1.26□□□□□ -2.21
TPM3P06753 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC1.26□□□□□ -2.21
TPM3P06753 MIR4295-201ENST00000585286 85 ntBASIC1.26□□□□□ -2.21
TPM3P06753 AP002802.2-201ENST00000605877 235 ntBASIC1.26□□□□□ -2.21
TPM3P06753 AL355802.3-201ENST00000607571 545 ntBASIC1.26□□□□□ -2.21
TPM3P06753 AC068880.4-201ENST00000623082 495 ntBASIC1.26□□□□□ -2.21
TPM3P06753 AP003485.1-201ENST00000625093 753 ntBASIC1.26□□□□□ -2.21
TPM3P06753 RNU6-743P-201ENST00000364151 106 ntBASIC1.25□□□□□ -2.21
TPM3P06753 SNORA62.1-201ENST00000364287 154 ntBASIC1.25□□□□□ -2.21
TPM3P06753 SNORA70.7-201ENST00000384159 133 ntBASIC1.25□□□□□ -2.21
TPM3P06753 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC1.25□□□□□ -2.21
TPM3P06753 MTCO1P17-201ENST00000411522 491 ntBASIC1.25□□□□□ -2.21
TPM3P06753 AL359704.1-201ENST00000411586 781 ntBASIC1.25□□□□□ -2.21
TPM3P06753 NDUFAF4P2-201ENST00000445374 520 ntBASIC1.25□□□□□ -2.21
TPM3P06753 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC1.25□□□□□ -2.21
TPM3P06753 AL513124.1-201ENST00000450410 614 ntBASIC1.25□□□□□ -2.21
TPM3P06753 DUXAP8-207ENST00000456786 622 ntBASIC1.25□□□□□ -2.21
TPM3P06753 AL358176.1-201ENST00000457477 357 ntTSL 5 BASIC1.25□□□□□ -2.21
TPM3P06753 RPL36AP21-201ENST00000490372 323 ntBASIC1.25□□□□□ -2.21
TPM3P06753 MTND1P36-201ENST00000522384 936 ntBASIC1.25□□□□□ -2.21
TPM3P06753 OR8K2P-201ENST00000524645 927 ntBASIC1.25□□□□□ -2.21
TPM3P06753 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC1.25□□□□□ -2.21
TPM3P06753 HSPE1P19-201ENST00000603327 295 ntBASIC1.25□□□□□ -2.21
TPM3P06753 AC007363.1-201ENST00000604736 620 ntBASIC1.25□□□□□ -2.21
TPM3P06753 AL121890.5-201ENST00000620848 304 ntBASIC1.25□□□□□ -2.21
TPM3P06753 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.25□□□□□ -2.21
TPM3P06753 RNA5SP126-201ENST00000365092 109 ntBASIC1.24□□□□□ -2.21
TPM3P06753 Y_RNA.534-201ENST00000384599 112 ntBASIC1.24□□□□□ -2.21
TPM3P06753 MIR29B2-201ENST00000385055 81 ntBASIC1.24□□□□□ -2.21
TPM3P06753 MIR513A1-201ENST00000385138 129 ntBASIC1.24□□□□□ -2.21
TPM3P06753 AC016831.2-201ENST00000417179 352 ntBASIC1.24□□□□□ -2.21
TPM3P06753 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC1.24□□□□□ -2.21
TPM3P06753 AL591704.1-201ENST00000432574 275 ntBASIC1.24□□□□□ -2.21
TPM3P06753 RPL23AP76-201ENST00000441860 458 ntBASIC1.24□□□□□ -2.21
TPM3P06753 EEF1E1P1-201ENST00000446998 430 ntBASIC1.24□□□□□ -2.21
TPM3P06753 ZNF886P-201ENST00000450781 723 ntBASIC1.24□□□□□ -2.21
TPM3P06753 AC003071.1-201ENST00000451219 789 ntBASIC1.24□□□□□ -2.21
TPM3P06753 RPL23AP35-201ENST00000451906 501 ntBASIC1.24□□□□□ -2.21
TPM3P06753 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC1.24□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 145 ms