Protein–RNA interactions for Protein: O95476

CTDNEP1, CTD nuclear envelope phosphatase 1, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1O95476 AC004520.1-201ENST00000608362 1413 ntBASIC1.9□□□□□ -2.11
CTDNEP1O95476 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
CTDNEP1O95476 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
CTDNEP1O95476 RNU4-91P-201ENST00000364778 135 ntBASIC1.89□□□□□ -2.11
CTDNEP1O95476 SNORA75-201ENST00000384158 137 ntBASIC1.89□□□□□ -2.11
CTDNEP1O95476 Y_RNA.534-201ENST00000384599 112 ntBASIC1.89□□□□□ -2.11
CTDNEP1O95476 RPS3AP36-201ENST00000398190 775 ntBASIC1.89□□□□□ -2.11
CTDNEP1O95476 MRPL42P2-201ENST00000403169 426 ntBASIC1.89□□□□□ -2.11
CTDNEP1O95476 RPS12P24-201ENST00000412619 387 ntBASIC1.89□□□□□ -2.11
CTDNEP1O95476 ISCA1P6-201ENST00000427740 390 ntBASIC1.89□□□□□ -2.11
CTDNEP1O95476 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC1.89□□□□□ -2.11
CTDNEP1O95476 GPM6BP2-201ENST00000432046 144 ntBASIC1.89□□□□□ -2.11
CTDNEP1O95476 MTCO2P16-201ENST00000436962 677 ntBASIC1.89□□□□□ -2.11
CTDNEP1O95476 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC1.89□□□□□ -2.11
CTDNEP1O95476 GPM6BP1-201ENST00000446387 144 ntBASIC1.89□□□□□ -2.11
CTDNEP1O95476 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC1.89□□□□□ -2.11
CTDNEP1O95476 AL513124.1-201ENST00000450410 614 ntBASIC1.89□□□□□ -2.11
CTDNEP1O95476 AL033528.1-201ENST00000453780 140 ntBASIC1.89□□□□□ -2.11
CTDNEP1O95476 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC1.89□□□□□ -2.11
CTDNEP1O95476 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC1.89□□□□□ -2.11
CTDNEP1O95476 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC1.89□□□□□ -2.11
CTDNEP1O95476 AC098591.2-201ENST00000510152 315 ntBASIC1.89□□□□□ -2.11
CTDNEP1O95476 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC1.89□□□□□ -2.11
CTDNEP1O95476 SCARNA24.1-201ENST00000516465 137 ntBASIC1.89□□□□□ -2.11
CTDNEP1O95476 UTP23-205ENST00000520733 369 ntTSL 3 BASIC1.89□□□□□ -2.11
CTDNEP1O95476 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC1.89□□□□□ -2.11
CTDNEP1O95476 MIR4298-201ENST00000584380 73 ntBASIC1.89□□□□□ -2.11
CTDNEP1O95476 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC1.89□□□□□ -2.11
CTDNEP1O95476 AL670379.6-201ENST00000603753 252 ntBASIC1.89□□□□□ -2.11
CTDNEP1O95476 AL670379.11-201ENST00000604059 253 ntBASIC1.89□□□□□ -2.11
CTDNEP1O95476 SEPT7P9-203ENST00000604116 343 ntBASIC1.89□□□□□ -2.11
CTDNEP1O95476 AC008162.1-201ENST00000604718 254 ntBASIC1.89□□□□□ -2.11
CTDNEP1O95476 AL670379.1-201ENST00000604752 252 ntBASIC1.89□□□□□ -2.11
CTDNEP1O95476 AC064872.1-201ENST00000604823 1072 ntBASIC1.89□□□□□ -2.11
CTDNEP1O95476 AC090578.1-201ENST00000604955 591 ntBASIC1.89□□□□□ -2.11
CTDNEP1O95476 AL670379.5-201ENST00000605253 252 ntBASIC1.89□□□□□ -2.11
CTDNEP1O95476 AL670379.12-201ENST00000605291 253 ntBASIC1.89□□□□□ -2.11
CTDNEP1O95476 AL670379.8-201ENST00000605353 252 ntBASIC1.89□□□□□ -2.11
CTDNEP1O95476 AL670379.7-201ENST00000605823 252 ntBASIC1.89□□□□□ -2.11
CTDNEP1O95476 AP001486.3-201ENST00000615334 372 ntBASIC1.89□□□□□ -2.11
CTDNEP1O95476 MIR7157-201ENST00000635801 60 ntBASIC1.89□□□□□ -2.11
CTDNEP1O95476 CENPCP1-201ENST00000533085 2578 ntBASIC1.89□□□□□ -2.11
CTDNEP1O95476 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC1.88□□□□□ -2.11
CTDNEP1O95476 SNORA4.3-201ENST00000365564 137 ntBASIC1.88□□□□□ -2.11
CTDNEP1O95476 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC1.88□□□□□ -2.11
CTDNEP1O95476 Z98749.2-208ENST00000381646 500 ntBASIC1.88□□□□□ -2.11
CTDNEP1O95476 SNORD116-1-201ENST00000384335 95 ntBASIC1.88□□□□□ -2.11
CTDNEP1O95476 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
CTDNEP1O95476 RNU6-817P-201ENST00000391083 104 ntBASIC1.88□□□□□ -2.11
CTDNEP1O95476 SNORA26.9-201ENST00000391322 122 ntBASIC1.88□□□□□ -2.11
CTDNEP1O95476 CIR1P3-201ENST00000405137 479 ntBASIC1.88□□□□□ -2.11
CTDNEP1O95476 AC127391.1-201ENST00000411737 98 ntBASIC1.88□□□□□ -2.11
CTDNEP1O95476 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC1.88□□□□□ -2.11
CTDNEP1O95476 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC1.88□□□□□ -2.11
CTDNEP1O95476 MTND3P17-201ENST00000416968 344 ntBASIC1.88□□□□□ -2.11
CTDNEP1O95476 ELOCP4-201ENST00000420090 333 ntBASIC1.88□□□□□ -2.11
CTDNEP1O95476 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC1.88□□□□□ -2.11
CTDNEP1O95476 BPY2DP-201ENST00000422208 265 ntBASIC1.88□□□□□ -2.11
CTDNEP1O95476 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC1.88□□□□□ -2.11
CTDNEP1O95476 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC1.88□□□□□ -2.11
CTDNEP1O95476 AL353706.1-201ENST00000436728 494 ntBASIC1.88□□□□□ -2.11
CTDNEP1O95476 MTCO1P19-201ENST00000443487 500 ntBASIC1.88□□□□□ -2.11
CTDNEP1O95476 AC010095.1-201ENST00000443543 144 ntBASIC1.88□□□□□ -2.11
CTDNEP1O95476 AC244505.5-201ENST00000443639 207 ntBASIC1.88□□□□□ -2.11
CTDNEP1O95476 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC1.88□□□□□ -2.11
CTDNEP1O95476 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC1.88□□□□□ -2.11
CTDNEP1O95476 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC1.88□□□□□ -2.11
CTDNEP1O95476 RNA5SP233-201ENST00000459153 113 ntBASIC1.88□□□□□ -2.11
CTDNEP1O95476 RPL39P36-201ENST00000490784 156 ntBASIC1.88□□□□□ -2.11
CTDNEP1O95476 LIAS-206ENST00000513731 826 ntTSL 5 BASIC1.88□□□□□ -2.11
CTDNEP1O95476 Y_RNA.695-201ENST00000516715 107 ntBASIC1.88□□□□□ -2.11
CTDNEP1O95476 SNORA18.6-201ENST00000516792 115 ntBASIC1.88□□□□□ -2.11
CTDNEP1O95476 AC090572.1-201ENST00000519251 160 ntBASIC1.88□□□□□ -2.11
CTDNEP1O95476 AC009902.1-201ENST00000519351 183 ntBASIC1.88□□□□□ -2.11
CTDNEP1O95476 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC1.88□□□□□ -2.11
CTDNEP1O95476 OR5AQ1P-201ENST00000527596 927 ntBASIC1.88□□□□□ -2.11
CTDNEP1O95476 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC1.88□□□□□ -2.11
CTDNEP1O95476 AC010186.2-204ENST00000537668 439 ntBASIC1.88□□□□□ -2.11
CTDNEP1O95476 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC1.88□□□□□ -2.11
CTDNEP1O95476 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC1.88□□□□□ -2.11
CTDNEP1O95476 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.88□□□□□ -2.11
CTDNEP1O95476 AC008749.1-201ENST00000597650 306 ntBASIC1.88□□□□□ -2.11
CTDNEP1O95476 AC073544.2-201ENST00000601155 540 ntBASIC1.88□□□□□ -2.11
CTDNEP1O95476 AC104763.2-201ENST00000604179 382 ntBASIC1.88□□□□□ -2.11
CTDNEP1O95476 AL121992.2-201ENST00000606262 256 ntBASIC1.88□□□□□ -2.11
CTDNEP1O95476 AC022893.3-201ENST00000607665 437 ntBASIC1.88□□□□□ -2.11
CTDNEP1O95476 AL133173.2-201ENST00000614270 90 ntBASIC1.88□□□□□ -2.11
CTDNEP1O95476 AP001506.1-201ENST00000615444 211 ntBASIC1.88□□□□□ -2.11
CTDNEP1O95476 AC108479.2-201ENST00000617314 601 ntBASIC1.88□□□□□ -2.11
CTDNEP1O95476 PISRT1-201ENST00000626175 531 ntBASIC1.88□□□□□ -2.11
CTDNEP1O95476 Z99571.1-201ENST00000636677 394 ntBASIC1.88□□□□□ -2.11
CTDNEP1O95476 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC1.88□□□□□ -2.11
CTDNEP1O95476 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
CTDNEP1O95476 SNORA20.2-201ENST00000383922 131 ntBASIC1.87□□□□□ -2.11
CTDNEP1O95476 SNORA75B-201ENST00000384053 137 ntBASIC1.87□□□□□ -2.11
CTDNEP1O95476 SNORD116-2-201ENST00000384274 95 ntBASIC1.87□□□□□ -2.11
CTDNEP1O95476 SNORD116-6-201ENST00000384711 96 ntBASIC1.87□□□□□ -2.11
CTDNEP1O95476 MIR558-201ENST00000384920 94 ntBASIC1.87□□□□□ -2.11
CTDNEP1O95476 MIR1261-201ENST00000408659 82 ntBASIC1.87□□□□□ -2.11
CTDNEP1O95476 RNU2-40P-201ENST00000410833 196 ntBASIC1.87□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 150.3 ms