Protein–RNA interactions for Protein: O76090

BEST1, Bestrophin-1, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1O76090 RNU6-434P-201ENST00000384376 107 ntBASIC2.73□□□□□ -1.97
BEST1O76090 RNU6-393P-201ENST00000384475 107 ntBASIC2.73□□□□□ -1.97
BEST1O76090 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
BEST1O76090 BTF3P7-201ENST00000407097 488 ntBASIC2.73□□□□□ -1.97
BEST1O76090 RNU2-16P-201ENST00000410712 136 ntBASIC2.73□□□□□ -1.97
BEST1O76090 RNU4-55P-201ENST00000410731 137 ntBASIC2.73□□□□□ -1.97
BEST1O76090 CYCSP33-201ENST00000414485 327 ntBASIC2.73□□□□□ -1.97
BEST1O76090 RPS3AP44-201ENST00000425466 790 ntBASIC2.73□□□□□ -1.97
BEST1O76090 AC010975.2-201ENST00000427781 588 ntBASIC2.73□□□□□ -1.97
BEST1O76090 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC2.73□□□□□ -1.97
BEST1O76090 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.73□□□□□ -1.97
BEST1O76090 RPL23AP20-201ENST00000447965 421 ntBASIC2.73□□□□□ -1.97
BEST1O76090 AL122001.1-201ENST00000457027 370 ntBASIC2.73□□□□□ -1.97
BEST1O76090 SNRPFP3-201ENST00000457792 225 ntBASIC2.73□□□□□ -1.97
BEST1O76090 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.73□□□□□ -1.97
BEST1O76090 RNA5SP148-201ENST00000516527 94 ntBASIC2.73□□□□□ -1.97
BEST1O76090 IL7-206ENST00000520269 456 ntTSL 3 BASIC2.73□□□□□ -1.97
BEST1O76090 AP005435.4-201ENST00000529514 284 ntBASIC2.73□□□□□ -1.97
BEST1O76090 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
BEST1O76090 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC2.73□□□□□ -1.97
BEST1O76090 MIR5571-201ENST00000577998 113 ntBASIC2.73□□□□□ -1.97
BEST1O76090 RPS15AP11-201ENST00000594193 385 ntBASIC2.73□□□□□ -1.97
BEST1O76090 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC2.73□□□□□ -1.97
BEST1O76090 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC2.73□□□□□ -1.97
BEST1O76090 AC104073.3-201ENST00000610942 955 ntBASIC2.73□□□□□ -1.97
BEST1O76090 AC069234.5-201ENST00000611056 416 ntBASIC2.73□□□□□ -1.97
BEST1O76090 RMST_7.1-201ENST00000621935 268 ntBASIC2.73□□□□□ -1.97
BEST1O76090 AL031601.2-202ENST00000622650 282 ntBASIC2.73□□□□□ -1.97
BEST1O76090 AC092608.2-201ENST00000624427 218 ntBASIC2.73□□□□□ -1.97
BEST1O76090 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
BEST1O76090 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
BEST1O76090 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
BEST1O76090 MTND5P26-201ENST00000426018 1752 ntBASIC2.72□□□□□ -1.97
BEST1O76090 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC2.72□□□□□ -1.97
BEST1O76090 OR56A5-201ENST00000340110 738 ntBASIC2.72□□□□□ -1.97
BEST1O76090 Y_RNA.194-201ENST00000363985 102 ntBASIC2.72□□□□□ -1.97
BEST1O76090 Y_RNA.500-201ENST00000384466 111 ntBASIC2.72□□□□□ -1.97
BEST1O76090 RNA5SP210-201ENST00000391034 120 ntBASIC2.72□□□□□ -1.97
BEST1O76090 RNU6-903P-201ENST00000391270 109 ntBASIC2.72□□□□□ -1.97
BEST1O76090 RNU2-66P-201ENST00000410650 161 ntBASIC2.72□□□□□ -1.97
BEST1O76090 AC009963.1-201ENST00000417265 157 ntBASIC2.72□□□□□ -1.97
BEST1O76090 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC2.72□□□□□ -1.97
BEST1O76090 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC2.72□□□□□ -1.97
BEST1O76090 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.72□□□□□ -1.97
BEST1O76090 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC2.72□□□□□ -1.97
BEST1O76090 USP9YP14-201ENST00000430663 563 ntBASIC2.72□□□□□ -1.97
BEST1O76090 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC2.72□□□□□ -1.97
BEST1O76090 RN7SL297P-201ENST00000483161 293 ntBASIC2.72□□□□□ -1.97
BEST1O76090 SNORA43.2-201ENST00000516652 128 ntBASIC2.72□□□□□ -1.97
BEST1O76090 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC2.72□□□□□ -1.97
BEST1O76090 AC027176.1-201ENST00000560204 514 ntBASIC2.72□□□□□ -1.97
BEST1O76090 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC2.72□□□□□ -1.97
BEST1O76090 MTATP6P3-201ENST00000581686 676 ntBASIC2.72□□□□□ -1.97
BEST1O76090 MIR3941-201ENST00000582572 103 ntBASIC2.72□□□□□ -1.97
BEST1O76090 BNIP3P30-201ENST00000601184 574 ntBASIC2.72□□□□□ -1.97
BEST1O76090 AC021646.1-201ENST00000605469 484 ntBASIC2.72□□□□□ -1.97
BEST1O76090 AC017083.3-201ENST00000609955 700 ntBASIC2.72□□□□□ -1.97
BEST1O76090 AC004908.3-201ENST00000610248 625 ntBASIC2.72□□□□□ -1.97
BEST1O76090 MIR6817-201ENST00000615588 66 ntBASIC2.72□□□□□ -1.97
BEST1O76090 AC022418.1-201ENST00000624118 445 ntBASIC2.72□□□□□ -1.97
BEST1O76090 AC243829.7-201ENST00000633081 225 ntBASIC2.72□□□□□ -1.97
BEST1O76090 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.72□□□□□ -1.97
BEST1O76090 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.72□□□□□ -1.97
BEST1O76090 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
BEST1O76090 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
BEST1O76090 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC2.71□□□□□ -1.98
BEST1O76090 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.71□□□□□ -1.98
BEST1O76090 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.71□□□□□ -1.98
BEST1O76090 RBBP8P1-201ENST00000449447 1844 ntBASIC2.71□□□□□ -1.98
BEST1O76090 SNORD114-19-201ENST00000363072 75 ntBASIC2.71□□□□□ -1.98
BEST1O76090 RNU4-24P-201ENST00000364565 139 ntBASIC2.71□□□□□ -1.98
BEST1O76090 RNU6-996P-201ENST00000365438 107 ntBASIC2.71□□□□□ -1.98
BEST1O76090 Y_RNA.480-201ENST00000384364 102 ntBASIC2.71□□□□□ -1.98
BEST1O76090 RNU6-1127P-201ENST00000384580 107 ntBASIC2.71□□□□□ -1.98
BEST1O76090 SNORD70.1-201ENST00000391007 85 ntBASIC2.71□□□□□ -1.98
BEST1O76090 AL133475.1-201ENST00000404414 305 ntBASIC2.71□□□□□ -1.98
BEST1O76090 SNORD88.1-201ENST00000408684 91 ntBASIC2.71□□□□□ -1.98
BEST1O76090 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC2.71□□□□□ -1.98
BEST1O76090 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC2.71□□□□□ -1.98
BEST1O76090 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC2.71□□□□□ -1.98
BEST1O76090 RPL7P12-201ENST00000446719 750 ntBASIC2.71□□□□□ -1.98
BEST1O76090 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC2.71□□□□□ -1.98
BEST1O76090 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC2.71□□□□□ -1.98
BEST1O76090 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC2.71□□□□□ -1.98
BEST1O76090 AC112771.1-201ENST00000463581 102 ntBASIC2.71□□□□□ -1.98
BEST1O76090 AC117503.1-201ENST00000472241 394 ntBASIC2.71□□□□□ -1.98
BEST1O76090 AL163973.1-201ENST00000484753 577 ntBASIC2.71□□□□□ -1.98
BEST1O76090 MTCO3P7-201ENST00000510008 774 ntBASIC2.71□□□□□ -1.98
BEST1O76090 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.71□□□□□ -1.98
BEST1O76090 RNA5SP320-201ENST00000516263 124 ntBASIC2.71□□□□□ -1.98
BEST1O76090 AC109329.1-201ENST00000518744 317 ntBASIC2.71□□□□□ -1.98
BEST1O76090 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.71□□□□□ -1.98
BEST1O76090 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC2.71□□□□□ -1.98
BEST1O76090 AL137161.1-201ENST00000532231 390 ntBASIC2.71□□□□□ -1.98
BEST1O76090 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC2.71□□□□□ -1.98
BEST1O76090 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC2.71□□□□□ -1.98
BEST1O76090 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC2.71□□□□□ -1.98
BEST1O76090 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.7□□□□□ -1.98
BEST1O76090 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.7□□□□□ -1.98
BEST1O76090 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.7□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 88.1 ms