Protein–RNA interactions for Protein: O60840

CACNA1F, Voltage-dependent L-type calcium channel subunit alpha-1F, humanhuman

Predictions only

Length 1,977 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1FO60840 RNU2-10P-201ENST00000516375 211 ntBASIC2.74□□□□□ -1.97
CACNA1FO60840 RNA5SP337-201ENST00000517007 109 ntBASIC2.74□□□□□ -1.97
CACNA1FO60840 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC2.74□□□□□ -1.97
CACNA1FO60840 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
CACNA1FO60840 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC2.74□□□□□ -1.97
CACNA1FO60840 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC2.74□□□□□ -1.97
CACNA1FO60840 AL133153.1-201ENST00000557756 303 ntBASIC2.74□□□□□ -1.97
CACNA1FO60840 MIR4742-201ENST00000581069 85 ntBASIC2.74□□□□□ -1.97
CACNA1FO60840 AL031176.1-201ENST00000604554 466 ntBASIC2.74□□□□□ -1.97
CACNA1FO60840 MIR1302-2-201ENST00000607096 138 ntBASIC2.74□□□□□ -1.97
CACNA1FO60840 AC011155.2-201ENST00000623202 216 ntBASIC2.74□□□□□ -1.97
CACNA1FO60840 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC2.74□□□□□ -1.97
CACNA1FO60840 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC2.74□□□□□ -1.97
CACNA1FO60840 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC2.74□□□□□ -1.97
CACNA1FO60840 RNU6-767P-201ENST00000384132 107 ntBASIC2.74□□□□□ -1.97
CACNA1FO60840 RNU6-74P-201ENST00000384235 107 ntBASIC2.74□□□□□ -1.97
CACNA1FO60840 RNU6-39P-201ENST00000384344 107 ntBASIC2.74□□□□□ -1.97
CACNA1FO60840 RNU6-821P-201ENST00000390995 107 ntBASIC2.74□□□□□ -1.97
CACNA1FO60840 U3.29-201ENST00000391296 212 ntBASIC2.74□□□□□ -1.97
CACNA1FO60840 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC2.74□□□□□ -1.97
CACNA1FO60840 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC2.74□□□□□ -1.97
CACNA1FO60840 BEND7P1-201ENST00000422058 457 ntBASIC2.74□□□□□ -1.97
CACNA1FO60840 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC2.74□□□□□ -1.97
CACNA1FO60840 AC092427.1-202ENST00000430569 476 ntBASIC2.74□□□□□ -1.97
CACNA1FO60840 OR4K11P-201ENST00000431829 904 ntBASIC2.74□□□□□ -1.97
CACNA1FO60840 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC2.74□□□□□ -1.97
CACNA1FO60840 snoU13.26-201ENST00000459452 105 ntBASIC2.74□□□□□ -1.97
CACNA1FO60840 RNU6-329P-201ENST00000459618 107 ntBASIC2.74□□□□□ -1.97
CACNA1FO60840 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC2.74□□□□□ -1.97
CACNA1FO60840 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC2.74□□□□□ -1.97
CACNA1FO60840 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
CACNA1FO60840 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC2.74□□□□□ -1.97
CACNA1FO60840 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC2.74□□□□□ -1.97
CACNA1FO60840 FGF7P4-201ENST00000509595 295 ntBASIC2.74□□□□□ -1.97
CACNA1FO60840 RN7SKP256-201ENST00000517201 314 ntBASIC2.74□□□□□ -1.97
CACNA1FO60840 AC107953.1-201ENST00000522216 297 ntBASIC2.74□□□□□ -1.97
CACNA1FO60840 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC2.74□□□□□ -1.97
CACNA1FO60840 AC126177.3-201ENST00000551839 688 ntBASIC2.74□□□□□ -1.97
CACNA1FO60840 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC2.74□□□□□ -1.97
CACNA1FO60840 OR4K8P-201ENST00000578842 1048 ntBASIC2.74□□□□□ -1.97
CACNA1FO60840 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC2.74□□□□□ -1.97
CACNA1FO60840 AC100810.6-201ENST00000638068 285 ntBASIC2.74□□□□□ -1.97
CACNA1FO60840 ANKRD20A9P-201ENST00000457997 2978 ntBASIC2.74□□□□□ -1.97
CACNA1FO60840 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
CACNA1FO60840 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
CACNA1FO60840 AC244517.1-201ENST00000606030 2086 ntBASIC2.73□□□□□ -1.97
CACNA1FO60840 AC073343.1-201ENST00000328239 651 ntBASIC2.73□□□□□ -1.97
CACNA1FO60840 OR56A5-201ENST00000340110 738 ntBASIC2.73□□□□□ -1.97
CACNA1FO60840 RNU6-263P-201ENST00000363811 107 ntBASIC2.73□□□□□ -1.97
CACNA1FO60840 Y_RNA.234-201ENST00000364409 97 ntBASIC2.73□□□□□ -1.97
CACNA1FO60840 RNU6-996P-201ENST00000365438 107 ntBASIC2.73□□□□□ -1.97
CACNA1FO60840 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
CACNA1FO60840 RNA5SP508-201ENST00000411327 119 ntBASIC2.73□□□□□ -1.97
CACNA1FO60840 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC2.73□□□□□ -1.97
CACNA1FO60840 PDCL2P1-201ENST00000419302 352 ntBASIC2.73□□□□□ -1.97
CACNA1FO60840 AL606489.2-201ENST00000433886 234 ntBASIC2.73□□□□□ -1.97
CACNA1FO60840 AC004062.1-201ENST00000509926 645 ntBASIC2.73□□□□□ -1.97
CACNA1FO60840 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC2.73□□□□□ -1.97
CACNA1FO60840 AC026464.5-201ENST00000562497 722 ntBASIC2.73□□□□□ -1.97
CACNA1FO60840 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC2.73□□□□□ -1.97
CACNA1FO60840 AC093913.1-201ENST00000614178 329 ntBASIC2.73□□□□□ -1.97
CACNA1FO60840 AC009233.1-201ENST00000616477 371 ntBASIC2.73□□□□□ -1.97
CACNA1FO60840 AC126177.8-201ENST00000618339 1015 ntBASIC2.73□□□□□ -1.97
CACNA1FO60840 AL136313.1-201ENST00000624804 202 ntBASIC2.73□□□□□ -1.97
CACNA1FO60840 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC2.73□□□□□ -1.97
CACNA1FO60840 OR4G1P-203ENST00000641984 1631 ntBASIC2.73□□□□□ -1.97
CACNA1FO60840 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
CACNA1FO60840 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC2.73□□□□□ -1.97
CACNA1FO60840 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
CACNA1FO60840 NACAP2-201ENST00000318548 624 ntBASIC2.72□□□□□ -1.97
CACNA1FO60840 Y_RNA.72-201ENST00000362894 103 ntBASIC2.72□□□□□ -1.97
CACNA1FO60840 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC2.72□□□□□ -1.97
CACNA1FO60840 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC2.72□□□□□ -1.97
CACNA1FO60840 DEFB109C-201ENST00000382575 264 ntBASIC2.72□□□□□ -1.97
CACNA1FO60840 DEFB109B-201ENST00000382656 264 ntBASIC2.72□□□□□ -1.97
CACNA1FO60840 SNORD116-29-201ENST00000384516 83 ntBASIC2.72□□□□□ -1.97
CACNA1FO60840 RNU6-754P-201ENST00000391166 107 ntBASIC2.72□□□□□ -1.97
CACNA1FO60840 AC092447.6-201ENST00000414578 210 ntBASIC2.72□□□□□ -1.97
CACNA1FO60840 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
CACNA1FO60840 RAC1P6-201ENST00000423911 575 ntBASIC2.72□□□□□ -1.97
CACNA1FO60840 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC2.72□□□□□ -1.97
CACNA1FO60840 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC2.72□□□□□ -1.97
CACNA1FO60840 AC010095.1-201ENST00000443543 144 ntBASIC2.72□□□□□ -1.97
CACNA1FO60840 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
CACNA1FO60840 AL118496.2-201ENST00000448300 230 ntBASIC2.72□□□□□ -1.97
CACNA1FO60840 AC233702.1-201ENST00000482905 502 ntBASIC2.72□□□□□ -1.97
CACNA1FO60840 AC087190.1-201ENST00000484462 480 ntBASIC2.72□□□□□ -1.97
CACNA1FO60840 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
CACNA1FO60840 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC2.72□□□□□ -1.97
CACNA1FO60840 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC2.72□□□□□ -1.97
CACNA1FO60840 MIR4524B-201ENST00000581569 115 ntBASIC2.72□□□□□ -1.97
CACNA1FO60840 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC2.72□□□□□ -1.97
CACNA1FO60840 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC2.72□□□□□ -1.97
CACNA1FO60840 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.72□□□□□ -1.97
CACNA1FO60840 AC244517.12-201ENST00000623581 663 ntBASIC2.72□□□□□ -1.97
CACNA1FO60840 AC091925.2-201ENST00000625059 256 ntBASIC2.72□□□□□ -1.97
CACNA1FO60840 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
CACNA1FO60840 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.72□□□□□ -1.97
CACNA1FO60840 SNORA62.1-201ENST00000364287 154 ntBASIC2.72□□□□□ -1.97
CACNA1FO60840 Y_RNA.356-201ENST00000365475 113 ntBASIC2.72□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 113.1 ms