Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC2.09□□□□□ -2.07
HCN1O60741 AC010678.1-201ENST00000614118 713 ntBASIC2.09□□□□□ -2.07
HCN1O60741 AC009090.3-201ENST00000616553 565 ntBASIC2.09□□□□□ -2.07
HCN1O60741 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
HCN1O60741 AC010378.1-201ENST00000619270 362 ntBASIC2.09□□□□□ -2.07
HCN1O60741 AL157786.1-207ENST00000627771 695 ntBASIC2.09□□□□□ -2.07
HCN1O60741 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.09□□□□□ -2.08
HCN1O60741 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.08
HCN1O60741 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC2.09□□□□□ -2.08
HCN1O60741 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.08
HCN1O60741 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC2.09□□□□□ -2.08
HCN1O60741 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC2.09□□□□□ -2.08
HCN1O60741 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC2.09□□□□□ -2.08
HCN1O60741 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC2.08□□□□□ -2.08
HCN1O60741 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.08□□□□□ -2.08
HCN1O60741 AL109809.4-201ENST00000603520 2185 ntBASIC2.08□□□□□ -2.08
HCN1O60741 AL591416.1-201ENST00000404015 867 ntBASIC2.08□□□□□ -2.08
HCN1O60741 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC2.08□□□□□ -2.08
HCN1O60741 HMGB3P2-201ENST00000411913 584 ntBASIC2.08□□□□□ -2.08
HCN1O60741 MTND3P17-201ENST00000416968 344 ntBASIC2.08□□□□□ -2.08
HCN1O60741 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC2.08□□□□□ -2.08
HCN1O60741 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC2.08□□□□□ -2.08
HCN1O60741 RPL30P4-201ENST00000429309 333 ntBASIC2.08□□□□□ -2.08
HCN1O60741 RPL31P35-201ENST00000431058 377 ntBASIC2.08□□□□□ -2.08
HCN1O60741 AL353706.1-201ENST00000436728 494 ntBASIC2.08□□□□□ -2.08
HCN1O60741 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC2.08□□□□□ -2.08
HCN1O60741 AC124916.1-201ENST00000444020 547 ntBASIC2.08□□□□□ -2.08
HCN1O60741 PSPHP1-201ENST00000450062 261 ntBASIC2.08□□□□□ -2.08
HCN1O60741 AC080013.2-201ENST00000460866 323 ntBASIC2.08□□□□□ -2.08
HCN1O60741 AC112206.3-201ENST00000514578 389 ntBASIC2.08□□□□□ -2.08
HCN1O60741 SNORA25.11-201ENST00000515935 105 ntBASIC2.08□□□□□ -2.08
HCN1O60741 MIR892C-201ENST00000516410 77 ntBASIC2.08□□□□□ -2.08
HCN1O60741 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC2.08□□□□□ -2.08
HCN1O60741 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC2.08□□□□□ -2.08
HCN1O60741 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC2.08□□□□□ -2.08
HCN1O60741 MIR4648-201ENST00000580107 72 ntBASIC2.08□□□□□ -2.08
HCN1O60741 AC064872.1-201ENST00000604823 1072 ntBASIC2.08□□□□□ -2.08
HCN1O60741 AL121917.1-203ENST00000605534 577 ntBASIC2.08□□□□□ -2.08
HCN1O60741 AC087752.4-201ENST00000605911 462 ntBASIC2.08□□□□□ -2.08
HCN1O60741 AC069294.1-201ENST00000608397 350 ntBASIC2.08□□□□□ -2.08
HCN1O60741 uc_338.14-201ENST00000613162 166 ntBASIC2.08□□□□□ -2.08
HCN1O60741 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC2.08□□□□□ -2.08
HCN1O60741 USP12-203ENST00000620323 349 ntTSL 3 BASIC2.08□□□□□ -2.08
HCN1O60741 MIR6766-201ENST00000622641 72 ntBASIC2.08□□□□□ -2.08
HCN1O60741 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
HCN1O60741 AC093648.1-201ENST00000623546 606 ntBASIC2.08□□□□□ -2.08
HCN1O60741 MTND5P30-201ENST00000452896 1731 ntBASIC2.08□□□□□ -2.08
HCN1O60741 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.08□□□□□ -2.08
HCN1O60741 MTND4P1-201ENST00000457501 1466 ntBASIC2.07□□□□□ -2.08
HCN1O60741 AL359854.1-201ENST00000614203 1594 ntBASIC2.07□□□□□ -2.08
HCN1O60741 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC2.07□□□□□ -2.08
HCN1O60741 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
HCN1O60741 DLEU2_6.3-201ENST00000340052 136 ntBASIC2.07□□□□□ -2.08
HCN1O60741 Y_RNA.201-201ENST00000364052 96 ntBASIC2.07□□□□□ -2.08
HCN1O60741 RNA5SP125-201ENST00000364843 120 ntBASIC2.07□□□□□ -2.08
HCN1O60741 MIR578-201ENST00000384828 96 ntBASIC2.07□□□□□ -2.08
HCN1O60741 AL133475.1-201ENST00000404414 305 ntBASIC2.07□□□□□ -2.08
HCN1O60741 CIR1P3-201ENST00000405137 479 ntBASIC2.07□□□□□ -2.08
HCN1O60741 MIR1302-8-201ENST00000408342 128 ntBASIC2.07□□□□□ -2.08
HCN1O60741 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC2.07□□□□□ -2.08
HCN1O60741 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC2.07□□□□□ -2.08
HCN1O60741 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.07□□□□□ -2.08
HCN1O60741 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC2.07□□□□□ -2.08
HCN1O60741 CALM2P2-201ENST00000428512 440 ntBASIC2.07□□□□□ -2.08
HCN1O60741 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
HCN1O60741 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC2.07□□□□□ -2.08
HCN1O60741 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC2.07□□□□□ -2.08
HCN1O60741 AC244505.5-201ENST00000443639 207 ntBASIC2.07□□□□□ -2.08
HCN1O60741 MTND1P27-201ENST00000451117 902 ntBASIC2.07□□□□□ -2.08
HCN1O60741 AC003071.1-201ENST00000451219 789 ntBASIC2.07□□□□□ -2.08
HCN1O60741 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
HCN1O60741 snoU13.26-201ENST00000459452 105 ntBASIC2.07□□□□□ -2.08
HCN1O60741 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC2.07□□□□□ -2.08
HCN1O60741 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC2.07□□□□□ -2.08
HCN1O60741 AC135279.1-201ENST00000543493 504 ntBASIC2.07□□□□□ -2.08
HCN1O60741 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.07□□□□□ -2.08
HCN1O60741 AL138976.2-201ENST00000563989 694 ntBASIC2.07□□□□□ -2.08
HCN1O60741 AC040904.1-201ENST00000590850 223 ntBASIC2.07□□□□□ -2.08
HCN1O60741 AC025165.5-201ENST00000602802 578 ntBASIC2.07□□□□□ -2.08
HCN1O60741 AC245014.2-201ENST00000603689 287 ntBASIC2.07□□□□□ -2.08
HCN1O60741 AC246785.4-201ENST00000605374 287 ntBASIC2.07□□□□□ -2.08
HCN1O60741 DLEU2_6.2-201ENST00000620994 136 ntBASIC2.07□□□□□ -2.08
HCN1O60741 AL031601.2-202ENST00000622650 282 ntBASIC2.07□□□□□ -2.08
HCN1O60741 MIR6873-201ENST00000622788 63 ntBASIC2.07□□□□□ -2.08
HCN1O60741 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
HCN1O60741 AP000553.5-201ENST00000641933 54 ntBASIC2.07□□□□□ -2.08
HCN1O60741 AC092881.1-201ENST00000638218 2733 ntBASIC2.07□□□□□ -2.08
HCN1O60741 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC2.07□□□□□ -2.08
HCN1O60741 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
HCN1O60741 IL33-202ENST00000417746 2327 ntTSL 2 BASIC2.06□□□□□ -2.08
HCN1O60741 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
HCN1O60741 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
HCN1O60741 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
HCN1O60741 Y_RNA.77-201ENST00000362962 107 ntBASIC2.06□□□□□ -2.08
HCN1O60741 RNU6-748P-201ENST00000384648 107 ntBASIC2.06□□□□□ -2.08
HCN1O60741 MIR504-201ENST00000385065 83 ntBASIC2.06□□□□□ -2.08
HCN1O60741 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
HCN1O60741 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
HCN1O60741 FTH1P15-201ENST00000406984 280 ntBASIC2.06□□□□□ -2.08
HCN1O60741 U3.40-201ENST00000408706 208 ntBASIC2.06□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 124.9 ms