Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 AC008015.1-201ENST00000555505 465 ntBASIC0.35□□□□□ -2.35
SSSCA1O60232 AC109446.2-201ENST00000567872 497 ntBASIC0.35□□□□□ -2.35
SSSCA1O60232 AC022387.2-201ENST00000604050 448 ntBASIC0.35□□□□□ -2.35
SSSCA1O60232 RNU6-91P-201ENST00000607774 107 ntBASIC0.35□□□□□ -2.35
SSSCA1O60232 MTND5P11-201ENST00000511037 1812 ntBASIC0.35□□□□□ -2.35
SSSCA1O60232 AC092447.10-201ENST00000620607 1652 ntBASIC0.34□□□□□ -2.35
SSSCA1O60232 Y_RNA.548-201ENST00000384656 105 ntBASIC0.34□□□□□ -2.36
SSSCA1O60232 MIR19B1-201ENST00000384829 87 ntBASIC0.34□□□□□ -2.36
SSSCA1O60232 RPL21P111-201ENST00000418453 477 ntBASIC0.34□□□□□ -2.36
SSSCA1O60232 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC0.34□□□□□ -2.36
SSSCA1O60232 SNX2P2-201ENST00000424553 323 ntBASIC0.34□□□□□ -2.36
SSSCA1O60232 RPL36AP53-201ENST00000432891 316 ntBASIC0.34□□□□□ -2.36
SSSCA1O60232 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC0.34□□□□□ -2.36
SSSCA1O60232 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC0.34□□□□□ -2.36
SSSCA1O60232 HSPE1P9-201ENST00000440046 311 ntBASIC0.34□□□□□ -2.36
SSSCA1O60232 AC104058.1-201ENST00000448028 297 ntBASIC0.34□□□□□ -2.36
SSSCA1O60232 SNORD124-201ENST00000459577 104 ntBASIC0.34□□□□□ -2.36
SSSCA1O60232 RPL7P43-201ENST00000478876 753 ntBASIC0.34□□□□□ -2.36
SSSCA1O60232 AC008628.1-201ENST00000508663 265 ntBASIC0.34□□□□□ -2.36
SSSCA1O60232 AC093259.1-201ENST00000509755 300 ntBASIC0.34□□□□□ -2.36
SSSCA1O60232 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC0.34□□□□□ -2.36
SSSCA1O60232 RNA5SP121-201ENST00000516537 101 ntBASIC0.34□□□□□ -2.36
SSSCA1O60232 RNU5B-3P-201ENST00000516601 115 ntBASIC0.34□□□□□ -2.36
SSSCA1O60232 RNU6-1092P-201ENST00000516955 87 ntBASIC0.34□□□□□ -2.36
SSSCA1O60232 TRAV32-201ENST00000553993 340 ntBASIC0.34□□□□□ -2.36
SSSCA1O60232 NIFKP8-201ENST00000560500 874 ntBASIC0.34□□□□□ -2.36
SSSCA1O60232 BNIP3P16-201ENST00000589779 534 ntBASIC0.34□□□□□ -2.36
SSSCA1O60232 B3GNTL1P2-201ENST00000603673 288 ntBASIC0.34□□□□□ -2.36
SSSCA1O60232 AL359821.1-201ENST00000605519 182 ntBASIC0.34□□□□□ -2.36
SSSCA1O60232 AL365434.2-201ENST00000607979 234 ntBASIC0.34□□□□□ -2.36
SSSCA1O60232 AL590240.4-201ENST00000616908 390 ntBASIC0.34□□□□□ -2.36
SSSCA1O60232 AC090617.9-201ENST00000623751 147 ntBASIC0.34□□□□□ -2.36
SSSCA1O60232 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.34□□□□□ -2.36
SSSCA1O60232 SNORD114-24-201ENST00000365029 72 ntBASIC0.33□□□□□ -2.36
SSSCA1O60232 RNU6-360P-201ENST00000390944 104 ntBASIC0.33□□□□□ -2.36
SSSCA1O60232 AC114737.2-201ENST00000421583 173 ntBASIC0.33□□□□□ -2.36
SSSCA1O60232 OFD1P2Y-201ENST00000421895 1149 ntBASIC0.33□□□□□ -2.36
SSSCA1O60232 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC0.33□□□□□ -2.36
SSSCA1O60232 AC244023.1-201ENST00000426884 112 ntBASIC0.33□□□□□ -2.36
SSSCA1O60232 AL669831.1-202ENST00000428504 417 ntBASIC0.33□□□□□ -2.36
SSSCA1O60232 FTH1P12-201ENST00000432137 551 ntBASIC0.33□□□□□ -2.36
SSSCA1O60232 TH2LCRR-202ENST00000435042 472 ntTSL 5 BASIC0.33□□□□□ -2.36
SSSCA1O60232 RNA5SP269-201ENST00000459032 137 ntBASIC0.33□□□□□ -2.36
SSSCA1O60232 AC130509.1-201ENST00000464158 433 ntBASIC0.33□□□□□ -2.36
SSSCA1O60232 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC0.33□□□□□ -2.36
SSSCA1O60232 TRBVA-201ENST00000498804 316 ntBASIC0.33□□□□□ -2.36
SSSCA1O60232 RNU2-53P-201ENST00000516257 147 ntBASIC0.33□□□□□ -2.36
SSSCA1O60232 RNA5SP503-201ENST00000517047 117 ntBASIC0.33□□□□□ -2.36
SSSCA1O60232 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC0.33□□□□□ -2.36
SSSCA1O60232 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC0.33□□□□□ -2.36
SSSCA1O60232 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC0.33□□□□□ -2.36
SSSCA1O60232 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC0.33□□□□□ -2.36
SSSCA1O60232 HSPE1P4-201ENST00000550617 308 ntBASIC0.33□□□□□ -2.36
SSSCA1O60232 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC0.33□□□□□ -2.36
SSSCA1O60232 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC0.33□□□□□ -2.36
SSSCA1O60232 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC0.33□□□□□ -2.36
SSSCA1O60232 CYP4A27P-201ENST00000567218 190 ntBASIC0.33□□□□□ -2.36
SSSCA1O60232 MIR5094-201ENST00000578766 85 ntBASIC0.33□□□□□ -2.36
SSSCA1O60232 AC005786.1-201ENST00000588553 154 ntBASIC0.33□□□□□ -2.36
SSSCA1O60232 AC091057.3-201ENST00000602684 733 ntBASIC0.33□□□□□ -2.36
SSSCA1O60232 AC073410.2-201ENST00000603240 332 ntBASIC0.33□□□□□ -2.36
SSSCA1O60232 AC242498.1-201ENST00000604134 111 ntBASIC0.33□□□□□ -2.36
SSSCA1O60232 AL139344.1-201ENST00000605228 195 ntBASIC0.33□□□□□ -2.36
SSSCA1O60232 AC098614.4-201ENST00000607601 462 ntBASIC0.33□□□□□ -2.36
SSSCA1O60232 AC243994.1-201ENST00000618627 109 ntBASIC0.33□□□□□ -2.36
SSSCA1O60232 AC002550.2-201ENST00000621246 394 ntBASIC0.33□□□□□ -2.36
SSSCA1O60232 AC130454.1-201ENST00000622948 401 ntBASIC0.33□□□□□ -2.36
SSSCA1O60232 AC068647.2-201ENST00000637380 353 ntBASIC0.33□□□□□ -2.36
SSSCA1O60232 PCF11-AS1-201ENST00000602322 1516 ntBASIC0.33□□□□□ -2.36
SSSCA1O60232 AL161781.1-201ENST00000354277 403 ntBASIC0.32□□□□□ -2.36
SSSCA1O60232 RNA5SP361-201ENST00000362686 118 ntBASIC0.32□□□□□ -2.36
SSSCA1O60232 RNA5SP499-201ENST00000363982 119 ntBASIC0.32□□□□□ -2.36
SSSCA1O60232 RNU6-1005P-201ENST00000384519 107 ntBASIC0.32□□□□□ -2.36
SSSCA1O60232 RNU6-160P-201ENST00000384591 107 ntBASIC0.32□□□□□ -2.36
SSSCA1O60232 MIR548B-201ENST00000385247 97 ntBASIC0.32□□□□□ -2.36
SSSCA1O60232 MTATP6P27-201ENST00000416987 621 ntBASIC0.32□□□□□ -2.36
SSSCA1O60232 CETN4P-201ENST00000432407 469 ntBASIC0.32□□□□□ -2.36
SSSCA1O60232 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC0.32□□□□□ -2.36
SSSCA1O60232 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC0.32□□□□□ -2.36
SSSCA1O60232 AC013828.1-201ENST00000481845 158 ntBASIC0.32□□□□□ -2.36
SSSCA1O60232 COX6CP6-201ENST00000490840 228 ntBASIC0.32□□□□□ -2.36
SSSCA1O60232 OR9N1P-202ENST00000494289 481 ntBASIC0.32□□□□□ -2.36
SSSCA1O60232 RNU6-1183P-201ENST00000517054 60 ntBASIC0.32□□□□□ -2.36
SSSCA1O60232 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC0.32□□□□□ -2.36
SSSCA1O60232 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC0.32□□□□□ -2.36
SSSCA1O60232 CYP3A137P-201ENST00000562436 69 ntBASIC0.32□□□□□ -2.36
SSSCA1O60232 AC136619.2-201ENST00000563361 631 ntBASIC0.32□□□□□ -2.36
SSSCA1O60232 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC0.32□□□□□ -2.36
SSSCA1O60232 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC0.32□□□□□ -2.36
SSSCA1O60232 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.32□□□□□ -2.36
SSSCA1O60232 AL355802.4-201ENST00000607635 548 ntBASIC0.32□□□□□ -2.36
SSSCA1O60232 AL596245.1-201ENST00000618994 362 ntBASIC0.32□□□□□ -2.36
SSSCA1O60232 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC0.31□□□□□ -2.36
SSSCA1O60232 SNORD114-19-201ENST00000363072 75 ntBASIC0.31□□□□□ -2.36
SSSCA1O60232 RNU6-944P-201ENST00000364023 107 ntBASIC0.31□□□□□ -2.36
SSSCA1O60232 Y_RNA.255-201ENST00000364581 97 ntBASIC0.31□□□□□ -2.36
SSSCA1O60232 RNU6-40P-201ENST00000384254 107 ntBASIC0.31□□□□□ -2.36
SSSCA1O60232 RPS3AP1-201ENST00000413190 320 ntBASIC0.31□□□□□ -2.36
SSSCA1O60232 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC0.31□□□□□ -2.36
SSSCA1O60232 C8orf59P1-201ENST00000429930 303 ntBASIC0.31□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms