Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 RNU1-107P-201ENST00000516617 154 ntBASIC3□□□□□ -1.93
LDB2O43679 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC3□□□□□ -1.93
LDB2O43679 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC3□□□□□ -1.93
LDB2O43679 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC3□□□□□ -1.93
LDB2O43679 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC3□□□□□ -1.93
LDB2O43679 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC3□□□□□ -1.93
LDB2O43679 AC138761.3-201ENST00000579993 334 ntBASIC3□□□□□ -1.93
LDB2O43679 POLR3GP2-201ENST00000588366 668 ntBASIC3□□□□□ -1.93
LDB2O43679 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC3□□□□□ -1.93
LDB2O43679 AC090574.1-201ENST00000623186 233 ntBASIC3□□□□□ -1.93
LDB2O43679 AC027309.3-201ENST00000623419 351 ntBASIC3□□□□□ -1.93
LDB2O43679 SCARNA15.3-201ENST00000626315 122 ntBASIC3□□□□□ -1.93
LDB2O43679 SCARNA4.1-201ENST00000628597 123 ntBASIC3□□□□□ -1.93
LDB2O43679 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3□□□□□ -1.93
LDB2O43679 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3□□□□□ -1.93
LDB2O43679 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3□□□□□ -1.93
LDB2O43679 ZNF519P1-201ENST00000449011 1626 ntBASIC3□□□□□ -1.93
LDB2O43679 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC2.99□□□□□ -1.93
LDB2O43679 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.99□□□□□ -1.93
LDB2O43679 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC2.99□□□□□ -1.93
LDB2O43679 Y_RNA.58-201ENST00000362807 102 ntBASIC2.99□□□□□ -1.93
LDB2O43679 Y_RNA.111-201ENST00000363248 100 ntBASIC2.99□□□□□ -1.93
LDB2O43679 Y_RNA.154-201ENST00000363624 102 ntBASIC2.99□□□□□ -1.93
LDB2O43679 RNY3P1-201ENST00000365085 102 ntBASIC2.99□□□□□ -1.93
LDB2O43679 RNY3-201ENST00000365484 102 ntBASIC2.99□□□□□ -1.93
LDB2O43679 RNU6-217P-201ENST00000384164 104 ntBASIC2.99□□□□□ -1.93
LDB2O43679 Y_RNA.490-201ENST00000384413 102 ntBASIC2.99□□□□□ -1.93
LDB2O43679 U3.26-201ENST00000391236 204 ntBASIC2.99□□□□□ -1.93
LDB2O43679 SNORA48.8-201ENST00000391324 134 ntBASIC2.99□□□□□ -1.93
LDB2O43679 RN7SKP158-201ENST00000410453 326 ntBASIC2.99□□□□□ -1.93
LDB2O43679 AC074085.1-201ENST00000413598 418 ntBASIC2.99□□□□□ -1.93
LDB2O43679 CYCSP33-201ENST00000414485 327 ntBASIC2.99□□□□□ -1.93
LDB2O43679 TMEM167AP1-201ENST00000423409 219 ntBASIC2.99□□□□□ -1.93
LDB2O43679 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC2.99□□□□□ -1.93
LDB2O43679 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC2.99□□□□□ -1.93
LDB2O43679 SNRPEP4-201ENST00000435815 279 ntBASIC2.99□□□□□ -1.93
LDB2O43679 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC2.99□□□□□ -1.93
LDB2O43679 AL359672.1-201ENST00000442302 409 ntBASIC2.99□□□□□ -1.93
LDB2O43679 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC2.99□□□□□ -1.93
LDB2O43679 MTND1P17-201ENST00000448961 204 ntBASIC2.99□□□□□ -1.93
LDB2O43679 NDUFB1P2-201ENST00000449477 176 ntBASIC2.99□□□□□ -1.93
LDB2O43679 RNU7-138P-201ENST00000459479 64 ntBASIC2.99□□□□□ -1.93
LDB2O43679 S100A11P2-201ENST00000467589 312 ntBASIC2.99□□□□□ -1.93
LDB2O43679 AL049873.1-201ENST00000480540 376 ntBASIC2.99□□□□□ -1.93
LDB2O43679 AC011005.2-201ENST00000487324 359 ntBASIC2.99□□□□□ -1.93
LDB2O43679 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC2.99□□□□□ -1.93
LDB2O43679 AC139453.3-201ENST00000493276 369 ntBASIC2.99□□□□□ -1.93
LDB2O43679 MTND5P5-201ENST00000503764 376 ntBASIC2.99□□□□□ -1.93
LDB2O43679 HMGN1P13-201ENST00000505795 138 ntBASIC2.99□□□□□ -1.93
LDB2O43679 AC010265.1-201ENST00000513509 211 ntBASIC2.99□□□□□ -1.93
LDB2O43679 AP005639.2-201ENST00000527592 928 ntBASIC2.99□□□□□ -1.93
LDB2O43679 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC2.99□□□□□ -1.93
LDB2O43679 AC007151.1-201ENST00000572774 483 ntBASIC2.99□□□□□ -1.93
LDB2O43679 AL670379.10-201ENST00000604330 253 ntBASIC2.99□□□□□ -1.93
LDB2O43679 AC007938.3-201ENST00000604965 623 ntBASIC2.99□□□□□ -1.93
LDB2O43679 AL670379.9-201ENST00000605428 253 ntBASIC2.99□□□□□ -1.93
LDB2O43679 AL050343.2-201ENST00000607338 280 ntBASIC2.99□□□□□ -1.93
LDB2O43679 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
LDB2O43679 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC2.99□□□□□ -1.93
LDB2O43679 AC006386.2-201ENST00000624491 75 ntBASIC2.99□□□□□ -1.93
LDB2O43679 AC012005.1-201ENST00000624575 75 ntBASIC2.99□□□□□ -1.93
LDB2O43679 EFTUD1P2-201ENST00000514817 1603 ntBASIC2.99□□□□□ -1.93
LDB2O43679 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
LDB2O43679 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
LDB2O43679 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
LDB2O43679 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC2.98□□□□□ -1.93
LDB2O43679 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC2.98□□□□□ -1.93
LDB2O43679 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC2.98□□□□□ -1.93
LDB2O43679 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC2.98□□□□□ -1.93
LDB2O43679 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC2.98□□□□□ -1.93
LDB2O43679 CUL1P1-201ENST00000509510 2425 ntBASIC2.98□□□□□ -1.93
LDB2O43679 RNU6-562P-201ENST00000362731 107 ntBASIC2.98□□□□□ -1.93
LDB2O43679 SNORD3E-201ENST00000362899 217 ntBASIC2.98□□□□□ -1.93
LDB2O43679 Y_RNA.324-201ENST00000365165 102 ntBASIC2.98□□□□□ -1.93
LDB2O43679 RNU1-101P-201ENST00000391171 127 ntBASIC2.98□□□□□ -1.93
LDB2O43679 SNORA40C-201ENST00000391285 128 ntBASIC2.98□□□□□ -1.93
LDB2O43679 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC2.98□□□□□ -1.93
LDB2O43679 COTL1P1-201ENST00000422309 375 ntBASIC2.98□□□□□ -1.93
LDB2O43679 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC2.98□□□□□ -1.93
LDB2O43679 Y_RNA.632-201ENST00000459189 102 ntBASIC2.98□□□□□ -1.93
LDB2O43679 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC2.98□□□□□ -1.93
LDB2O43679 MTND4LP22-201ENST00000508209 276 ntBASIC2.98□□□□□ -1.93
LDB2O43679 RNU1-103P-201ENST00000516502 125 ntBASIC2.98□□□□□ -1.93
LDB2O43679 RNU6-1332P-201ENST00000516666 104 ntBASIC2.98□□□□□ -1.93
LDB2O43679 RNU6-711P-201ENST00000517255 106 ntBASIC2.98□□□□□ -1.93
LDB2O43679 AC009812.2-201ENST00000517657 457 ntBASIC2.98□□□□□ -1.93
LDB2O43679 AC025755.1-201ENST00000521306 278 ntBASIC2.98□□□□□ -1.93
LDB2O43679 AP002404.1-201ENST00000532005 451 ntBASIC2.98□□□□□ -1.93
LDB2O43679 HPRT1P3-201ENST00000539521 576 ntBASIC2.98□□□□□ -1.93
LDB2O43679 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
LDB2O43679 AC044792.1-201ENST00000593294 196 ntBASIC2.98□□□□□ -1.93
LDB2O43679 APOOP1-201ENST00000604695 592 ntBASIC2.98□□□□□ -1.93
LDB2O43679 AC016727.1-205ENST00000605437 569 ntBASIC2.98□□□□□ -1.93
LDB2O43679 ATP5A1P2-202ENST00000616464 443 ntBASIC2.98□□□□□ -1.93
LDB2O43679 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC2.98□□□□□ -1.93
LDB2O43679 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC2.98□□□□□ -1.93
LDB2O43679 AC110774.1-201ENST00000623567 2018 ntBASIC2.98□□□□□ -1.93
LDB2O43679 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
LDB2O43679 FAM35BP-202ENST00000497389 3337 ntBASIC2.97□□□□□ -1.93
LDB2O43679 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC2.97□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 123.7 ms