Protein–RNA interactions for Protein: O43490

PROM1, Prominin-1, humanhuman

Predictions only

Length 865 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1O43490 RNA5SP51-201ENST00000364750 119 ntBASIC3.43□□□□□ -1.86
PROM1O43490 RNU6-842P-201ENST00000384269 107 ntBASIC3.43□□□□□ -1.86
PROM1O43490 RNU6-463P-201ENST00000384340 107 ntBASIC3.43□□□□□ -1.86
PROM1O43490 RNU6-933P-201ENST00000384424 107 ntBASIC3.43□□□□□ -1.86
PROM1O43490 RPL21P17-201ENST00000397467 475 ntBASIC3.43□□□□□ -1.86
PROM1O43490 RNU6-985P-201ENST00000410182 104 ntBASIC3.43□□□□□ -1.86
PROM1O43490 AC096664.2-201ENST00000411843 406 ntBASIC3.43□□□□□ -1.86
PROM1O43490 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC3.43□□□□□ -1.86
PROM1O43490 Z85995.1-201ENST00000415547 335 ntBASIC3.43□□□□□ -1.86
PROM1O43490 SYF2P2-201ENST00000417620 583 ntBASIC3.43□□□□□ -1.86
PROM1O43490 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.43□□□□□ -1.86
PROM1O43490 AC008267.5-201ENST00000424928 265 ntBASIC3.43□□□□□ -1.86
PROM1O43490 AL358176.2-201ENST00000425769 204 ntBASIC3.43□□□□□ -1.86
PROM1O43490 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
PROM1O43490 AL590383.1-201ENST00000428602 75 ntBASIC3.43□□□□□ -1.86
PROM1O43490 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC3.43□□□□□ -1.86
PROM1O43490 GSTA11P-201ENST00000452866 669 ntBASIC3.43□□□□□ -1.86
PROM1O43490 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
PROM1O43490 RNA5SP310-201ENST00000459084 116 ntBASIC3.43□□□□□ -1.86
PROM1O43490 MTATP8P1-201ENST00000467115 207 ntBASIC3.43□□□□□ -1.86
PROM1O43490 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.43□□□□□ -1.86
PROM1O43490 AC074250.1-201ENST00000511117 192 ntBASIC3.43□□□□□ -1.86
PROM1O43490 SNORD116.3-201ENST00000517176 78 ntBASIC3.43□□□□□ -1.86
PROM1O43490 RNA5SP291-201ENST00000517222 105 ntBASIC3.43□□□□□ -1.86
PROM1O43490 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.43□□□□□ -1.86
PROM1O43490 AC004024.1-201ENST00000549244 247 ntBASIC3.43□□□□□ -1.86
PROM1O43490 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.43□□□□□ -1.86
PROM1O43490 MIR3186-201ENST00000577404 85 ntBASIC3.43□□□□□ -1.86
PROM1O43490 MIR4738-201ENST00000579134 87 ntBASIC3.43□□□□□ -1.86
PROM1O43490 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC3.43□□□□□ -1.86
PROM1O43490 AL138880.2-201ENST00000616214 239 ntBASIC3.43□□□□□ -1.86
PROM1O43490 AC103988.1-201ENST00000566382 2177 ntBASIC3.43□□□□□ -1.86
PROM1O43490 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
PROM1O43490 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
PROM1O43490 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.43□□□□□ -1.86
PROM1O43490 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC3.43□□□□□ -1.86
PROM1O43490 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC3.42□□□□□ -1.86
PROM1O43490 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.42□□□□□ -1.86
PROM1O43490 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
PROM1O43490 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
PROM1O43490 AL021368.2-201ENST00000606125 5352 ntBASIC3.42□□□□□ -1.86
PROM1O43490 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC3.42□□□□□ -1.86
PROM1O43490 RNA5SP42-201ENST00000364278 115 ntBASIC3.42□□□□□ -1.86
PROM1O43490 MIR183-201ENST00000384958 110 ntBASIC3.42□□□□□ -1.86
PROM1O43490 AL030996.1-201ENST00000411430 235 ntBASIC3.42□□□□□ -1.86
PROM1O43490 RPS29P4-201ENST00000414733 161 ntBASIC3.42□□□□□ -1.86
PROM1O43490 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC3.42□□□□□ -1.86
PROM1O43490 AC006989.1-201ENST00000427212 131 ntBASIC3.42□□□□□ -1.86
PROM1O43490 TOMM20P4-201ENST00000427861 435 ntBASIC3.42□□□□□ -1.86
PROM1O43490 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC3.42□□□□□ -1.86
PROM1O43490 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC3.42□□□□□ -1.86
PROM1O43490 AL031274.1-201ENST00000450334 232 ntBASIC3.42□□□□□ -1.86
PROM1O43490 KC877373.1-201ENST00000479066 408 ntBASIC3.42□□□□□ -1.86
PROM1O43490 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC3.42□□□□□ -1.86
PROM1O43490 RPL32P34-201ENST00000486380 400 ntBASIC3.42□□□□□ -1.86
PROM1O43490 AC011005.2-201ENST00000487324 359 ntBASIC3.42□□□□□ -1.86
PROM1O43490 HMGN1P11-201ENST00000508668 303 ntBASIC3.42□□□□□ -1.86
PROM1O43490 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.42□□□□□ -1.86
PROM1O43490 SNORA70.16-201ENST00000516390 95 ntBASIC3.42□□□□□ -1.86
PROM1O43490 RNU6-764P-201ENST00000516396 105 ntBASIC3.42□□□□□ -1.86
PROM1O43490 RNU6-579P-201ENST00000516879 102 ntBASIC3.42□□□□□ -1.86
PROM1O43490 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC3.42□□□□□ -1.86
PROM1O43490 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC3.42□□□□□ -1.86
PROM1O43490 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC3.42□□□□□ -1.86
PROM1O43490 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.42□□□□□ -1.86
PROM1O43490 AC006077.1-201ENST00000604746 343 ntBASIC3.42□□□□□ -1.86
PROM1O43490 AL121917.1-203ENST00000605534 577 ntBASIC3.42□□□□□ -1.86
PROM1O43490 AL162373.1-201ENST00000620433 407 ntBASIC3.42□□□□□ -1.86
PROM1O43490 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.42□□□□□ -1.86
PROM1O43490 AC119674.1-207ENST00000641355 633 ntBASIC3.42□□□□□ -1.86
PROM1O43490 AC007656.2-201ENST00000624902 4547 ntBASIC3.42□□□□□ -1.86
PROM1O43490 MAPK10-322ENST00000641485 4530 ntBASIC3.42□□□□□ -1.86
PROM1O43490 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.42□□□□□ -1.86
PROM1O43490 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
PROM1O43490 MTND5P1-201ENST00000445440 1375 ntBASIC3.41□□□□□ -1.86
PROM1O43490 MIR412-201ENST00000362142 91 ntBASIC3.41□□□□□ -1.86
PROM1O43490 RNU6-37P-201ENST00000362692 107 ntBASIC3.41□□□□□ -1.86
PROM1O43490 Y_RNA.111-201ENST00000363248 100 ntBASIC3.41□□□□□ -1.86
PROM1O43490 RNU6-11P-201ENST00000364234 107 ntBASIC3.41□□□□□ -1.86
PROM1O43490 RNU6-7-201ENST00000364784 107 ntBASIC3.41□□□□□ -1.86
PROM1O43490 RNU6-283P-201ENST00000364788 107 ntBASIC3.41□□□□□ -1.86
PROM1O43490 RNU6-8-201ENST00000365467 107 ntBASIC3.41□□□□□ -1.86
PROM1O43490 RNU6-25P-201ENST00000383873 107 ntBASIC3.41□□□□□ -1.86
PROM1O43490 RNU6-1-201ENST00000383898 107 ntBASIC3.41□□□□□ -1.86
PROM1O43490 RNU6-48P-201ENST00000384161 107 ntBASIC3.41□□□□□ -1.86
PROM1O43490 RNU6-36P-201ENST00000384172 107 ntBASIC3.41□□□□□ -1.86
PROM1O43490 RNU6-4P-201ENST00000384205 107 ntBASIC3.41□□□□□ -1.86
PROM1O43490 RNU6-5P-201ENST00000384238 107 ntBASIC3.41□□□□□ -1.86
PROM1O43490 RNU6-3P-201ENST00000384314 107 ntBASIC3.41□□□□□ -1.86
PROM1O43490 RNU6-16P-201ENST00000384385 107 ntBASIC3.41□□□□□ -1.86
PROM1O43490 Y_RNA.496-201ENST00000384444 101 ntBASIC3.41□□□□□ -1.86
PROM1O43490 RNU6-15P-201ENST00000384534 107 ntBASIC3.41□□□□□ -1.86
PROM1O43490 RNU6-2-201ENST00000384627 107 ntBASIC3.41□□□□□ -1.86
PROM1O43490 RNU6-29P-201ENST00000384637 107 ntBASIC3.41□□□□□ -1.86
PROM1O43490 RNU6-9-201ENST00000384776 107 ntBASIC3.41□□□□□ -1.86
PROM1O43490 RNU6-33P-201ENST00000384793 107 ntBASIC3.41□□□□□ -1.86
PROM1O43490 MIR634-201ENST00000385208 97 ntBASIC3.41□□□□□ -1.86
PROM1O43490 RPS4XP3-201ENST00000398541 413 ntBASIC3.41□□□□□ -1.86
PROM1O43490 RNU6-55P-201ENST00000411092 107 ntBASIC3.41□□□□□ -1.86
PROM1O43490 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.41□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 136.9 ms