Protein–RNA interactions for Protein: O43395

PRPF3, U4/U6 small nuclear ribonucleoprotein Prp3, humanhuman

Known RBP Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3O43395 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
PRPF3O43395 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC3.58□□□□□ -1.84
PRPF3O43395 IL33-202ENST00000417746 2327 ntTSL 2 BASIC3.58□□□□□ -1.84
PRPF3O43395 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.57□□□□□ -1.84
PRPF3O43395 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.57□□□□□ -1.84
PRPF3O43395 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
PRPF3O43395 CBX3P1-201ENST00000325243 554 ntBASIC3.57□□□□□ -1.84
PRPF3O43395 RNU6-1303P-201ENST00000364841 107 ntBASIC3.57□□□□□ -1.84
PRPF3O43395 RNU6-487P-201ENST00000365430 104 ntBASIC3.57□□□□□ -1.84
PRPF3O43395 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC3.57□□□□□ -1.84
PRPF3O43395 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
PRPF3O43395 RNU6-1148P-201ENST00000410992 104 ntBASIC3.57□□□□□ -1.84
PRPF3O43395 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.57□□□□□ -1.84
PRPF3O43395 PGBD4P6-201ENST00000421501 610 ntBASIC3.57□□□□□ -1.84
PRPF3O43395 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC3.57□□□□□ -1.84
PRPF3O43395 MTND4LP16-201ENST00000440828 295 ntBASIC3.57□□□□□ -1.84
PRPF3O43395 RPL7P12-201ENST00000446719 750 ntBASIC3.57□□□□□ -1.84
PRPF3O43395 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC3.57□□□□□ -1.84
PRPF3O43395 AC006445.1-201ENST00000491925 405 ntBASIC3.57□□□□□ -1.84
PRPF3O43395 AC008628.2-201ENST00000502605 298 ntBASIC3.57□□□□□ -1.84
PRPF3O43395 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC3.57□□□□□ -1.84
PRPF3O43395 TBCAP3-201ENST00000512475 312 ntBASIC3.57□□□□□ -1.84
PRPF3O43395 PANCR-202ENST00000513690 448 ntTSL 2 BASIC3.57□□□□□ -1.84
PRPF3O43395 AC114781.4-201ENST00000513707 639 ntBASIC3.57□□□□□ -1.84
PRPF3O43395 Y_RNA.687-201ENST00000516558 91 ntBASIC3.57□□□□□ -1.84
PRPF3O43395 Y_RNA.702-201ENST00000516843 96 ntBASIC3.57□□□□□ -1.84
PRPF3O43395 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.57□□□□□ -1.84
PRPF3O43395 MIR5692C1-201ENST00000585309 91 ntBASIC3.57□□□□□ -1.84
PRPF3O43395 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.57□□□□□ -1.84
PRPF3O43395 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC3.57□□□□□ -1.84
PRPF3O43395 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC3.57□□□□□ -1.84
PRPF3O43395 AL357078.3-201ENST00000607528 618 ntBASIC3.57□□□□□ -1.84
PRPF3O43395 uc_338.14-201ENST00000613162 166 ntBASIC3.57□□□□□ -1.84
PRPF3O43395 AC009248.2-201ENST00000619826 254 ntBASIC3.57□□□□□ -1.84
PRPF3O43395 RMST_7.1-201ENST00000621935 268 ntBASIC3.57□□□□□ -1.84
PRPF3O43395 MIR3651-201ENST00000630427 90 ntBASIC3.57□□□□□ -1.84
PRPF3O43395 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
PRPF3O43395 RNU6-254P-201ENST00000363377 107 ntBASIC3.56□□□□□ -1.84
PRPF3O43395 Y_RNA.166-201ENST00000363730 102 ntBASIC3.56□□□□□ -1.84
PRPF3O43395 RNU6-767P-201ENST00000384132 107 ntBASIC3.56□□□□□ -1.84
PRPF3O43395 SNORD67-201ENST00000390833 111 ntBASIC3.56□□□□□ -1.84
PRPF3O43395 AL122016.1-201ENST00000403365 367 ntBASIC3.56□□□□□ -1.84
PRPF3O43395 NDUFB4P4-201ENST00000404822 243 ntBASIC3.56□□□□□ -1.84
PRPF3O43395 RN7SKP32-201ENST00000410167 303 ntBASIC3.56□□□□□ -1.84
PRPF3O43395 AC016831.2-201ENST00000417179 352 ntBASIC3.56□□□□□ -1.84
PRPF3O43395 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC3.56□□□□□ -1.84
PRPF3O43395 RPL35AP12-201ENST00000425362 338 ntBASIC3.56□□□□□ -1.84
PRPF3O43395 UBE2V1P4-201ENST00000425374 344 ntBASIC3.56□□□□□ -1.84
PRPF3O43395 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
PRPF3O43395 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC3.56□□□□□ -1.84
PRPF3O43395 AC107626.1-201ENST00000471084 183 ntBASIC3.56□□□□□ -1.84
PRPF3O43395 AC006483.1-201ENST00000487308 313 ntBASIC3.56□□□□□ -1.84
PRPF3O43395 RN7SL20P-201ENST00000488827 297 ntBASIC3.56□□□□□ -1.84
PRPF3O43395 RNU6-323P-201ENST00000521915 107 ntBASIC3.56□□□□□ -1.84
PRPF3O43395 AC107953.1-201ENST00000522216 297 ntBASIC3.56□□□□□ -1.84
PRPF3O43395 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
PRPF3O43395 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC3.56□□□□□ -1.84
PRPF3O43395 CTHRC1P1-201ENST00000605383 469 ntBASIC3.56□□□□□ -1.84
PRPF3O43395 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.56□□□□□ -1.84
PRPF3O43395 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.56□□□□□ -1.84
PRPF3O43395 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC3.56□□□□□ -1.84
PRPF3O43395 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC3.55□□□□□ -1.84
PRPF3O43395 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
PRPF3O43395 AC138393.1-203ENST00000327086 343 ntBASIC3.55□□□□□ -1.84
PRPF3O43395 RNU5E-4P-201ENST00000364931 120 ntBASIC3.55□□□□□ -1.84
PRPF3O43395 SNORA54-201ENST00000384281 123 ntBASIC3.55□□□□□ -1.84
PRPF3O43395 MIR450B-201ENST00000401182 78 ntBASIC3.55□□□□□ -1.84
PRPF3O43395 Z92545.1-201ENST00000411782 234 ntBASIC3.55□□□□□ -1.84
PRPF3O43395 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC3.55□□□□□ -1.84
PRPF3O43395 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC3.55□□□□□ -1.84
PRPF3O43395 HMGN1P12-201ENST00000499125 195 ntBASIC3.55□□□□□ -1.84
PRPF3O43395 SEM1P1-201ENST00000506694 209 ntBASIC3.55□□□□□ -1.84
PRPF3O43395 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC3.55□□□□□ -1.84
PRPF3O43395 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC3.55□□□□□ -1.84
PRPF3O43395 AC243972.3-201ENST00000539655 198 ntBASIC3.55□□□□□ -1.84
PRPF3O43395 AC009163.5-201ENST00000575421 637 ntBASIC3.55□□□□□ -1.84
PRPF3O43395 MIR3200-201ENST00000580767 85 ntBASIC3.55□□□□□ -1.84
PRPF3O43395 UBE2V2P2-201ENST00000587677 504 ntBASIC3.55□□□□□ -1.84
PRPF3O43395 AC012493.2-201ENST00000595083 291 ntBASIC3.55□□□□□ -1.84
PRPF3O43395 AC091152.3-201ENST00000604227 325 ntBASIC3.55□□□□□ -1.84
PRPF3O43395 RNU6-85P-201ENST00000605989 107 ntBASIC3.55□□□□□ -1.84
PRPF3O43395 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
PRPF3O43395 AC022306.2-201ENST00000617563 647 ntBASIC3.55□□□□□ -1.84
PRPF3O43395 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC3.55□□□□□ -1.84
PRPF3O43395 MIR8057-201ENST00000620957 69 ntBASIC3.55□□□□□ -1.84
PRPF3O43395 U4.7-201ENST00000638126 106 ntBASIC3.55□□□□□ -1.84
PRPF3O43395 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.55□□□□□ -1.84
PRPF3O43395 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.54□□□□□ -1.84
PRPF3O43395 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.54□□□□□ -1.84
PRPF3O43395 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
PRPF3O43395 AC073325.2-201ENST00000339545 159 ntBASIC3.54□□□□□ -1.84
PRPF3O43395 ZBTB8OSP1-201ENST00000342688 498 ntBASIC3.54□□□□□ -1.84
PRPF3O43395 RNA5SP374-201ENST00000362939 125 ntBASIC3.54□□□□□ -1.84
PRPF3O43395 AL512633.1-201ENST00000399931 655 ntBASIC3.54□□□□□ -1.84
PRPF3O43395 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.54□□□□□ -1.84
PRPF3O43395 RN7SKP220-201ENST00000410611 288 ntBASIC3.54□□□□□ -1.84
PRPF3O43395 RNU2-49P-201ENST00000410666 184 ntBASIC3.54□□□□□ -1.84
PRPF3O43395 SNORD56-201ENST00000413522 71 ntBASIC3.54□□□□□ -1.84
PRPF3O43395 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.54□□□□□ -1.84
PRPF3O43395 RPS15AP10-201ENST00000432472 382 ntBASIC3.54□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 115.9 ms