Protein–RNA interactions for Protein: O15347

HMGB3, High mobility group protein B3, humanhuman

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3O15347 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC0.89□□□□□ -2.27
HMGB3O15347 MIR3912-201ENST00000577566 105 ntBASIC0.89□□□□□ -2.27
HMGB3O15347 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC0.89□□□□□ -2.27
HMGB3O15347 MIR4293-201ENST00000584305 78 ntBASIC0.89□□□□□ -2.27
HMGB3O15347 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC0.89□□□□□ -2.27
HMGB3O15347 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC0.89□□□□□ -2.27
HMGB3O15347 MIR3529-201ENST00000637713 78 ntBASIC0.89□□□□□ -2.27
HMGB3O15347 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC0.88□□□□□ -2.27
HMGB3O15347 RNU6-655P-201ENST00000362858 107 ntBASIC0.88□□□□□ -2.27
HMGB3O15347 MIR19A-201ENST00000384878 82 ntBASIC0.88□□□□□ -2.27
HMGB3O15347 SNORA26.9-201ENST00000391322 122 ntBASIC0.88□□□□□ -2.27
HMGB3O15347 MRPS36P1-201ENST00000421291 307 ntBASIC0.88□□□□□ -2.27
HMGB3O15347 TOMM20P4-201ENST00000427861 435 ntBASIC0.88□□□□□ -2.27
HMGB3O15347 JTBP1-201ENST00000441314 247 ntBASIC0.88□□□□□ -2.27
HMGB3O15347 USP9YP17-201ENST00000444617 696 ntBASIC0.88□□□□□ -2.27
HMGB3O15347 MTND2P4-201ENST00000445034 1004 ntBASIC0.88□□□□□ -2.27
HMGB3O15347 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC0.88□□□□□ -2.27
HMGB3O15347 RNU6-150P-201ENST00000516237 95 ntBASIC0.88□□□□□ -2.27
HMGB3O15347 RNU6-143P-201ENST00000516942 93 ntBASIC0.88□□□□□ -2.27
HMGB3O15347 AC021451.1-201ENST00000523498 1129 ntBASIC0.88□□□□□ -2.27
HMGB3O15347 AC104417.1-201ENST00000523974 751 ntBASIC0.88□□□□□ -2.27
HMGB3O15347 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC0.88□□□□□ -2.27
HMGB3O15347 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC0.88□□□□□ -2.27
HMGB3O15347 MIR4303-201ENST00000581299 66 ntBASIC0.88□□□□□ -2.27
HMGB3O15347 VN1R87P-201ENST00000596706 487 ntBASIC0.88□□□□□ -2.27
HMGB3O15347 AC004987.4-201ENST00000603383 338 ntBASIC0.88□□□□□ -2.27
HMGB3O15347 AP000860.1-201ENST00000605250 559 ntBASIC0.88□□□□□ -2.27
HMGB3O15347 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC0.88□□□□□ -2.27
HMGB3O15347 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC0.88□□□□□ -2.27
HMGB3O15347 AC068205.3-201ENST00000636385 468 ntBASIC0.88□□□□□ -2.27
HMGB3O15347 RNU6-1284P-201ENST00000363701 100 ntBASIC0.87□□□□□ -2.27
HMGB3O15347 RNU6-1210P-201ENST00000363775 107 ntBASIC0.87□□□□□ -2.27
HMGB3O15347 RNU6-609P-201ENST00000365459 107 ntBASIC0.87□□□□□ -2.27
HMGB3O15347 RNU6-296P-201ENST00000384608 107 ntBASIC0.87□□□□□ -2.27
HMGB3O15347 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC0.87□□□□□ -2.27
HMGB3O15347 RAC1P6-201ENST00000423911 575 ntBASIC0.87□□□□□ -2.27
HMGB3O15347 AL669831.1-202ENST00000428504 417 ntBASIC0.87□□□□□ -2.27
HMGB3O15347 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC0.87□□□□□ -2.27
HMGB3O15347 UBE2V1P8-201ENST00000437166 265 ntBASIC0.87□□□□□ -2.27
HMGB3O15347 MTCYBP42-201ENST00000444653 1130 ntBASIC0.87□□□□□ -2.27
HMGB3O15347 AL353718.1-201ENST00000451028 517 ntBASIC0.87□□□□□ -2.27
HMGB3O15347 snoU13.14-201ENST00000459372 104 ntBASIC0.87□□□□□ -2.27
HMGB3O15347 RPS23P4-201ENST00000487908 423 ntBASIC0.87□□□□□ -2.27
HMGB3O15347 AC093852.1-201ENST00000503587 266 ntBASIC0.87□□□□□ -2.27
HMGB3O15347 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC0.87□□□□□ -2.27
HMGB3O15347 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC0.87□□□□□ -2.27
HMGB3O15347 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC0.87□□□□□ -2.27
HMGB3O15347 MIR3660-201ENST00000584845 100 ntBASIC0.87□□□□□ -2.27
HMGB3O15347 AC005786.1-201ENST00000588553 154 ntBASIC0.87□□□□□ -2.27
HMGB3O15347 AC023043.2-201ENST00000589678 1026 ntBASIC0.87□□□□□ -2.27
HMGB3O15347 AC098483.2-201ENST00000603158 454 ntBASIC0.87□□□□□ -2.27
HMGB3O15347 AL358072.1-201ENST00000604156 575 ntBASIC0.87□□□□□ -2.27
HMGB3O15347 AC092140.2-201ENST00000618027 521 ntBASIC0.87□□□□□ -2.27
HMGB3O15347 AC092656.1-203ENST00000624134 423 ntBASIC0.87□□□□□ -2.27
HMGB3O15347 AC022513.1-201ENST00000624512 117 ntBASIC0.87□□□□□ -2.27
HMGB3O15347 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC0.87□□□□□ -2.27
HMGB3O15347 ICE2P2-201ENST00000483823 2787 ntBASIC0.87□□□□□ -2.27
HMGB3O15347 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC0.87□□□□□ -2.27
HMGB3O15347 SNORD33-201ENST00000362761 85 ntBASIC0.86□□□□□ -2.27
HMGB3O15347 RNU6-622P-201ENST00000384272 103 ntBASIC0.86□□□□□ -2.27
HMGB3O15347 RNU6-160P-201ENST00000384591 107 ntBASIC0.86□□□□□ -2.27
HMGB3O15347 MIR29B2-201ENST00000385055 81 ntBASIC0.86□□□□□ -2.27
HMGB3O15347 RPL39P29-201ENST00000447779 157 ntBASIC0.86□□□□□ -2.27
HMGB3O15347 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.86□□□□□ -2.27
HMGB3O15347 AC079140.2-201ENST00000506193 142 ntBASIC0.86□□□□□ -2.27
HMGB3O15347 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC0.86□□□□□ -2.27
HMGB3O15347 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC0.86□□□□□ -2.27
HMGB3O15347 RNY4P37-201ENST00000516225 96 ntBASIC0.86□□□□□ -2.27
HMGB3O15347 RNA5SP404-201ENST00000517118 132 ntBASIC0.86□□□□□ -2.27
HMGB3O15347 RNU6-64P-201ENST00000517119 105 ntBASIC0.86□□□□□ -2.27
HMGB3O15347 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC0.86□□□□□ -2.27
HMGB3O15347 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC0.86□□□□□ -2.27
HMGB3O15347 AL356057.1-201ENST00000533798 831 ntBASIC0.86□□□□□ -2.27
HMGB3O15347 MDM2-232ENST00000544561 213 ntTSL 5 BASIC0.86□□□□□ -2.27
HMGB3O15347 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC0.86□□□□□ -2.27
HMGB3O15347 AC090115.3-201ENST00000553218 849 ntBASIC0.86□□□□□ -2.27
HMGB3O15347 RPS3AP4-201ENST00000555161 764 ntBASIC0.86□□□□□ -2.27
HMGB3O15347 BNIP3P30-201ENST00000601184 574 ntBASIC0.86□□□□□ -2.27
HMGB3O15347 AF131215.7-201ENST00000602443 707 ntBASIC0.86□□□□□ -2.27
HMGB3O15347 AC090186.1-201ENST00000605991 572 ntBASIC0.86□□□□□ -2.27
HMGB3O15347 AC078880.5-201ENST00000617845 421 ntBASIC0.86□□□□□ -2.27
HMGB3O15347 MIR8063-201ENST00000621930 81 ntBASIC0.86□□□□□ -2.27
HMGB3O15347 MIR1248-201ENST00000629190 106 ntBASIC0.86□□□□□ -2.27
HMGB3O15347 MTND5P33-201ENST00000571250 1450 ntBASIC0.86□□□□□ -2.27
HMGB3O15347 AC068700.1-201ENST00000565862 3754 ntBASIC0.85□□□□□ -2.27
HMGB3O15347 RNU6-858P-201ENST00000362436 107 ntBASIC0.85□□□□□ -2.27
HMGB3O15347 Y_RNA.40-201ENST00000362645 93 ntBASIC0.85□□□□□ -2.27
HMGB3O15347 RNU6-743P-201ENST00000364151 106 ntBASIC0.85□□□□□ -2.27
HMGB3O15347 SNORD114-6-201ENST00000364393 72 ntBASIC0.85□□□□□ -2.27
HMGB3O15347 RNU6-817P-201ENST00000391083 104 ntBASIC0.85□□□□□ -2.27
HMGB3O15347 TIMM9P2-201ENST00000419324 266 ntBASIC0.85□□□□□ -2.27
HMGB3O15347 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC0.85□□□□□ -2.27
HMGB3O15347 C8orf59P1-201ENST00000429930 303 ntBASIC0.85□□□□□ -2.27
HMGB3O15347 HMGB3P12-201ENST00000438745 556 ntBASIC0.85□□□□□ -2.27
HMGB3O15347 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC0.85□□□□□ -2.27
HMGB3O15347 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC0.85□□□□□ -2.27
HMGB3O15347 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC0.85□□□□□ -2.27
HMGB3O15347 AC087441.2-201ENST00000529141 262 ntBASIC0.85□□□□□ -2.27
HMGB3O15347 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC0.85□□□□□ -2.27
HMGB3O15347 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC0.85□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms