Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 SNORD33-201ENST00000362761 85 ntBASIC0.57□□□□□ -2.32
CHD1O14646 U3.8-201ENST00000363675 217 ntBASIC0.57□□□□□ -2.32
CHD1O14646 RNU6-360P-201ENST00000390944 104 ntBASIC0.57□□□□□ -2.32
CHD1O14646 RNU2-36P-201ENST00000410361 191 ntBASIC0.57□□□□□ -2.32
CHD1O14646 NDUFS5P4-201ENST00000412983 318 ntBASIC0.57□□□□□ -2.32
CHD1O14646 OFD1P2Y-201ENST00000421895 1149 ntBASIC0.57□□□□□ -2.32
CHD1O14646 RPS25P9-201ENST00000435591 252 ntBASIC0.57□□□□□ -2.32
CHD1O14646 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC0.57□□□□□ -2.32
CHD1O14646 AP005229.2-201ENST00000609980 697 ntBASIC0.57□□□□□ -2.32
CHD1O14646 uc_338.22-201ENST00000622722 187 ntBASIC0.57□□□□□ -2.32
CHD1O14646 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC0.57□□□□□ -2.32
CHD1O14646 Z75746.1-201ENST00000440243 2080 ntBASIC0.56□□□□□ -2.32
CHD1O14646 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC0.56□□□□□ -2.32
CHD1O14646 RNU1-58P-201ENST00000362413 163 ntBASIC0.56□□□□□ -2.32
CHD1O14646 SNORA25B-201ENST00000365507 128 ntBASIC0.56□□□□□ -2.32
CHD1O14646 AL117342.1-201ENST00000404861 406 ntBASIC0.56□□□□□ -2.32
CHD1O14646 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC0.56□□□□□ -2.32
CHD1O14646 AC092634.2-201ENST00000428146 1010 ntBASIC0.56□□□□□ -2.32
CHD1O14646 PGBD4P5-201ENST00000445958 426 ntBASIC0.56□□□□□ -2.32
CHD1O14646 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC0.56□□□□□ -2.32
CHD1O14646 PSMC1P5-201ENST00000512850 177 ntBASIC0.56□□□□□ -2.32
CHD1O14646 FAM157A-202ENST00000615155 405 ntBASIC0.56□□□□□ -2.32
CHD1O14646 RNU6-741P-201ENST00000383889 107 ntBASIC0.55□□□□□ -2.32
CHD1O14646 MIR135A2-201ENST00000384854 100 ntBASIC0.55□□□□□ -2.32
CHD1O14646 AC010099.3-201ENST00000423896 409 ntBASIC0.55□□□□□ -2.32
CHD1O14646 RPS27P16-201ENST00000425758 201 ntBASIC0.55□□□□□ -2.32
CHD1O14646 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.55□□□□□ -2.32
CHD1O14646 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC0.55□□□□□ -2.32
CHD1O14646 COX7A2P2-201ENST00000505291 250 ntBASIC0.55□□□□□ -2.32
CHD1O14646 RNU4-77P-201ENST00000516692 156 ntBASIC0.55□□□□□ -2.32
CHD1O14646 AC006518.2-201ENST00000542513 940 ntBASIC0.55□□□□□ -2.32
CHD1O14646 AC004217.3-201ENST00000551552 878 ntBASIC0.55□□□□□ -2.32
CHD1O14646 TEX41-243ENST00000614173 190 ntTSL 5 BASIC0.55□□□□□ -2.32
CHD1O14646 AC009318.4-201ENST00000620496 486 ntBASIC0.55□□□□□ -2.32
CHD1O14646 AC099654.5-201ENST00000636479 350 ntBASIC0.55□□□□□ -2.32
CHD1O14646 MIR514A1-201ENST00000385133 98 ntBASIC0.55□□□□□ -2.32
CHD1O14646 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC0.55□□□□□ -2.32
CHD1O14646 TH2LCRR-202ENST00000435042 472 ntTSL 5 BASIC0.55□□□□□ -2.32
CHD1O14646 NANOGP2-201ENST00000435391 727 ntBASIC0.55□□□□□ -2.32
CHD1O14646 PRELID3BP1-201ENST00000457142 540 ntBASIC0.55□□□□□ -2.32
CHD1O14646 RPS26P55-201ENST00000471178 356 ntBASIC0.55□□□□□ -2.32
CHD1O14646 RPL21P47-201ENST00000483696 477 ntBASIC0.55□□□□□ -2.32
CHD1O14646 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC0.55□□□□□ -2.32
CHD1O14646 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC0.55□□□□□ -2.32
CHD1O14646 AC083865.1-201ENST00000636634 831 ntBASIC0.55□□□□□ -2.32
CHD1O14646 RNY4P3-201ENST00000365254 95 ntBASIC0.54□□□□□ -2.32
CHD1O14646 MIR32-201ENST00000384965 70 ntBASIC0.54□□□□□ -2.32
CHD1O14646 MIR329-1-201ENST00000385028 80 ntBASIC0.54□□□□□ -2.32
CHD1O14646 AC006461.1-201ENST00000412637 326 ntBASIC0.54□□□□□ -2.32
CHD1O14646 MTCYBP32-201ENST00000427945 1084 ntBASIC0.54□□□□□ -2.32
CHD1O14646 AL137001.1-201ENST00000450212 199 ntTSL 3 BASIC0.54□□□□□ -2.32
CHD1O14646 MTCO3P2-201ENST00000457365 171 ntBASIC0.54□□□□□ -2.32
CHD1O14646 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC0.54□□□□□ -2.32
CHD1O14646 POC1B-211ENST00000549504 581 ntTSL 5 BASIC0.54□□□□□ -2.32
CHD1O14646 AC002400.1-201ENST00000569310 726 ntBASIC0.54□□□□□ -2.32
CHD1O14646 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC0.54□□□□□ -2.32
CHD1O14646 MIR608-201ENST00000384820 100 ntBASIC0.53□□□□□ -2.32
CHD1O14646 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC0.53□□□□□ -2.32
CHD1O14646 MTND1P33-201ENST00000446251 917 ntBASIC0.53□□□□□ -2.32
CHD1O14646 AC015724.1-201ENST00000478577 156 ntBASIC0.53□□□□□ -2.32
CHD1O14646 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC0.53□□□□□ -2.32
CHD1O14646 AC125611.1-201ENST00000549563 229 ntBASIC0.53□□□□□ -2.32
CHD1O14646 MIR5190-201ENST00000581537 80 ntBASIC0.53□□□□□ -2.32
CHD1O14646 RNU6-414P-201ENST00000363705 104 ntBASIC0.52□□□□□ -2.33
CHD1O14646 Y_RNA.549-201ENST00000384657 102 ntBASIC0.52□□□□□ -2.33
CHD1O14646 MIR1302-8-201ENST00000408342 128 ntBASIC0.52□□□□□ -2.33
CHD1O14646 MIR1267-201ENST00000408723 78 ntBASIC0.52□□□□□ -2.33
CHD1O14646 RNA5SP501-201ENST00000410990 112 ntBASIC0.52□□□□□ -2.33
CHD1O14646 AC069282.1-201ENST00000411911 526 ntBASIC0.52□□□□□ -2.33
CHD1O14646 Z95118.1-201ENST00000421372 247 ntBASIC0.52□□□□□ -2.33
CHD1O14646 HSPE1P13-201ENST00000451143 297 ntBASIC0.52□□□□□ -2.33
CHD1O14646 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC0.52□□□□□ -2.33
CHD1O14646 RAP1BP2-201ENST00000478270 544 ntBASIC0.52□□□□□ -2.33
CHD1O14646 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC0.52□□□□□ -2.33
CHD1O14646 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC0.52□□□□□ -2.33
CHD1O14646 AL590705.4-201ENST00000532209 134 ntBASIC0.52□□□□□ -2.33
CHD1O14646 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC0.52□□□□□ -2.33
CHD1O14646 AC021739.1-201ENST00000559631 174 ntBASIC0.52□□□□□ -2.33
CHD1O14646 AL365204.3-201ENST00000612448 685 ntBASIC0.52□□□□□ -2.33
CHD1O14646 DLEU1_2.1-201ENST00000617920 342 ntBASIC0.52□□□□□ -2.33
CHD1O14646 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.52□□□□□ -2.33
CHD1O14646 RNU6-152P-201ENST00000384037 107 ntBASIC0.52□□□□□ -2.33
CHD1O14646 MTCO1P3-201ENST00000429327 192 ntBASIC0.52□□□□□ -2.33
CHD1O14646 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC0.52□□□□□ -2.33
CHD1O14646 AC025465.3-201ENST00000510570 311 ntBASIC0.52□□□□□ -2.33
CHD1O14646 RNU4-57P-201ENST00000515980 135 ntBASIC0.52□□□□□ -2.33
CHD1O14646 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC0.52□□□□□ -2.33
CHD1O14646 AC012213.3-201ENST00000577199 777 ntBASIC0.52□□□□□ -2.33
CHD1O14646 AC024060.1-201ENST00000607052 494 ntBASIC0.52□□□□□ -2.33
CHD1O14646 USP12-203ENST00000620323 349 ntTSL 3 BASIC0.52□□□□□ -2.33
CHD1O14646 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC0.52□□□□□ -2.33
CHD1O14646 AC092125.1-201ENST00000562568 1995 ntBASIC0.52□□□□□ -2.33
CHD1O14646 GDI2P1-201ENST00000429312 1336 ntBASIC0.51□□□□□ -2.33
CHD1O14646 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC0.51□□□□□ -2.33
CHD1O14646 RNU6-921P-201ENST00000384361 107 ntBASIC0.51□□□□□ -2.33
CHD1O14646 RNU6ATAC11P-201ENST00000408541 125 ntBASIC0.51□□□□□ -2.33
CHD1O14646 AC127391.1-201ENST00000411737 98 ntBASIC0.51□□□□□ -2.33
CHD1O14646 RPS27P22-201ENST00000478056 241 ntBASIC0.51□□□□□ -2.33
CHD1O14646 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC0.51□□□□□ -2.33
CHD1O14646 AC005741.1-201ENST00000511094 432 ntBASIC0.51□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms