Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 PRPS1P1-201ENST00000445305 876 ntBASIC3.47□□□□□ -1.85
TRIM38O00635 AL118520.1-201ENST00000450770 291 ntBASIC3.47□□□□□ -1.85
TRIM38O00635 MTATP6P7-201ENST00000453315 681 ntBASIC3.47□□□□□ -1.85
TRIM38O00635 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC3.47□□□□□ -1.85
TRIM38O00635 MTCO3P10-201ENST00000455912 772 ntBASIC3.47□□□□□ -1.85
TRIM38O00635 SNRPFP3-201ENST00000457792 225 ntBASIC3.47□□□□□ -1.85
TRIM38O00635 RNU7-23P-201ENST00000459465 62 ntBASIC3.47□□□□□ -1.85
TRIM38O00635 RN7SL807P-201ENST00000470923 297 ntBASIC3.47□□□□□ -1.85
TRIM38O00635 AP002884.2-201ENST00000471647 395 ntBASIC3.47□□□□□ -1.85
TRIM38O00635 RPL23AP11-201ENST00000475260 469 ntBASIC3.47□□□□□ -1.85
TRIM38O00635 AC104136.1-201ENST00000512969 394 ntBASIC3.47□□□□□ -1.85
TRIM38O00635 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC3.47□□□□□ -1.85
TRIM38O00635 LIAS-206ENST00000513731 826 ntTSL 5 BASIC3.47□□□□□ -1.85
TRIM38O00635 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
TRIM38O00635 AP000889.2-201ENST00000532684 490 ntBASIC3.47□□□□□ -1.85
TRIM38O00635 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC3.47□□□□□ -1.85
TRIM38O00635 AL391261.3-201ENST00000557194 520 ntBASIC3.47□□□□□ -1.85
TRIM38O00635 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC3.47□□□□□ -1.85
TRIM38O00635 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC3.47□□□□□ -1.85
TRIM38O00635 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.47□□□□□ -1.85
TRIM38O00635 HMGB1P24-202ENST00000615653 685 ntBASIC3.47□□□□□ -1.85
TRIM38O00635 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.47□□□□□ -1.85
TRIM38O00635 AC022418.1-201ENST00000624118 445 ntBASIC3.47□□□□□ -1.85
TRIM38O00635 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.47□□□□□ -1.85
TRIM38O00635 SRP72P2-201ENST00000344851 1979 ntBASIC3.47□□□□□ -1.85
TRIM38O00635 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
TRIM38O00635 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.46□□□□□ -1.85
TRIM38O00635 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.85
TRIM38O00635 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.46□□□□□ -1.85
TRIM38O00635 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC3.46□□□□□ -1.85
TRIM38O00635 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
TRIM38O00635 RNU6-778P-201ENST00000363269 103 ntBASIC3.46□□□□□ -1.86
TRIM38O00635 Y_RNA.149-201ENST00000363558 117 ntBASIC3.46□□□□□ -1.86
TRIM38O00635 Y_RNA.414-201ENST00000384011 101 ntBASIC3.46□□□□□ -1.86
TRIM38O00635 AL714022.1-201ENST00000439897 151 ntBASIC3.46□□□□□ -1.86
TRIM38O00635 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC3.46□□□□□ -1.86
TRIM38O00635 snoU13.28-201ENST00000459235 104 ntBASIC3.46□□□□□ -1.86
TRIM38O00635 RN7SL442P-201ENST00000473804 320 ntBASIC3.46□□□□□ -1.86
TRIM38O00635 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC3.46□□□□□ -1.86
TRIM38O00635 RNU6-273P-201ENST00000516937 96 ntBASIC3.46□□□□□ -1.86
TRIM38O00635 RNU6-703P-201ENST00000516946 107 ntBASIC3.46□□□□□ -1.86
TRIM38O00635 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC3.46□□□□□ -1.86
TRIM38O00635 AC093331.1-201ENST00000521474 169 ntBASIC3.46□□□□□ -1.86
TRIM38O00635 AL161670.1-201ENST00000554348 137 ntBASIC3.46□□□□□ -1.86
TRIM38O00635 AL118558.2-201ENST00000556294 238 ntBASIC3.46□□□□□ -1.86
TRIM38O00635 AL670379.10-201ENST00000604330 253 ntBASIC3.46□□□□□ -1.86
TRIM38O00635 AL670379.9-201ENST00000605428 253 ntBASIC3.46□□□□□ -1.86
TRIM38O00635 YPEL5P2-201ENST00000605553 359 ntBASIC3.46□□□□□ -1.86
TRIM38O00635 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
TRIM38O00635 Z69720.2-201ENST00000624755 279 ntBASIC3.46□□□□□ -1.86
TRIM38O00635 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC3.46□□□□□ -1.86
TRIM38O00635 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.46□□□□□ -1.86
TRIM38O00635 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
TRIM38O00635 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
TRIM38O00635 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.46□□□□□ -1.86
TRIM38O00635 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
TRIM38O00635 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.45□□□□□ -1.86
TRIM38O00635 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
TRIM38O00635 Y_RNA.5-201ENST00000362334 102 ntBASIC3.45□□□□□ -1.86
TRIM38O00635 Y_RNA.158-201ENST00000363651 101 ntBASIC3.45□□□□□ -1.86
TRIM38O00635 Y_RNA.167-201ENST00000363735 109 ntBASIC3.45□□□□□ -1.86
TRIM38O00635 RNU6-1188P-201ENST00000363795 107 ntBASIC3.45□□□□□ -1.86
TRIM38O00635 RNU4-66P-201ENST00000365199 138 ntBASIC3.45□□□□□ -1.86
TRIM38O00635 RNU1-73P-201ENST00000383971 164 ntBASIC3.45□□□□□ -1.86
TRIM38O00635 Y_RNA.476-201ENST00000384347 108 ntBASIC3.45□□□□□ -1.86
TRIM38O00635 MIR128-1-201ENST00000384921 82 ntBASIC3.45□□□□□ -1.86
TRIM38O00635 UBE2V1P2-201ENST00000397758 440 ntBASIC3.45□□□□□ -1.86
TRIM38O00635 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.45□□□□□ -1.86
TRIM38O00635 RN7SKP158-201ENST00000410453 326 ntBASIC3.45□□□□□ -1.86
TRIM38O00635 RNU6-1025P-201ENST00000410629 104 ntBASIC3.45□□□□□ -1.86
TRIM38O00635 RNA5SP31-201ENST00000411144 127 ntBASIC3.45□□□□□ -1.86
TRIM38O00635 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.45□□□□□ -1.86
TRIM38O00635 MTCYBP10-201ENST00000424905 650 ntBASIC3.45□□□□□ -1.86
TRIM38O00635 AC098614.2-201ENST00000426040 255 ntBASIC3.45□□□□□ -1.86
TRIM38O00635 MYL8P-204ENST00000431574 518 ntBASIC3.45□□□□□ -1.86
TRIM38O00635 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC3.45□□□□□ -1.86
TRIM38O00635 ELOCP24-201ENST00000456370 334 ntBASIC3.45□□□□□ -1.86
TRIM38O00635 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC3.45□□□□□ -1.86
TRIM38O00635 U8.20-201ENST00000459445 131 ntBASIC3.45□□□□□ -1.86
TRIM38O00635 RPL21P41-201ENST00000459863 264 ntBASIC3.45□□□□□ -1.86
TRIM38O00635 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.45□□□□□ -1.86
TRIM38O00635 AC083904.1-201ENST00000487828 231 ntBASIC3.45□□□□□ -1.86
TRIM38O00635 RPL21P13-201ENST00000488305 481 ntBASIC3.45□□□□□ -1.86
TRIM38O00635 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC3.45□□□□□ -1.86
TRIM38O00635 MTCYBP40-201ENST00000509390 1135 ntBASIC3.45□□□□□ -1.86
TRIM38O00635 RNU6-764P-201ENST00000516396 105 ntBASIC3.45□□□□□ -1.86
TRIM38O00635 RNU6-579P-201ENST00000516879 102 ntBASIC3.45□□□□□ -1.86
TRIM38O00635 AC009902.1-201ENST00000519351 183 ntBASIC3.45□□□□□ -1.86
TRIM38O00635 AL137161.1-201ENST00000532231 390 ntBASIC3.45□□□□□ -1.86
TRIM38O00635 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC3.45□□□□□ -1.86
TRIM38O00635 AC106782.4-201ENST00000568264 210 ntBASIC3.45□□□□□ -1.86
TRIM38O00635 MIR5692A1-201ENST00000580523 69 ntBASIC3.45□□□□□ -1.86
TRIM38O00635 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.45□□□□□ -1.86
TRIM38O00635 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
TRIM38O00635 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC3.45□□□□□ -1.86
TRIM38O00635 AC004852.3-201ENST00000614131 326 ntBASIC3.45□□□□□ -1.86
TRIM38O00635 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC3.45□□□□□ -1.86
TRIM38O00635 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
TRIM38O00635 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
TRIM38O00635 MTND5P19-201ENST00000424872 1794 ntBASIC3.45□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 89.6 ms