Protein–RNA interactions for Protein: O00257

CBX4, E3 SUMO-protein ligase CBX4, humanhuman

Predictions only

Length 560 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4O00257 AP000553.6-201ENST00000641242 118 ntBASIC3.77□□□□□ -1.81
CBX4O00257 AC119674.1-207ENST00000641355 633 ntBASIC3.77□□□□□ -1.81
CBX4O00257 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
CBX4O00257 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
CBX4O00257 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.77□□□□□ -1.81
CBX4O00257 AC006504.1-201ENST00000562493 3666 ntBASIC3.77□□□□□ -1.81
CBX4O00257 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
CBX4O00257 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.77□□□□□ -1.81
CBX4O00257 AC110491.1-201ENST00000562191 2010 ntBASIC3.77□□□□□ -1.81
CBX4O00257 CD36-221ENST00000534394 1741 ntTSL 2 BASIC3.76□□□□□ -1.81
CBX4O00257 IL33-203ENST00000456383 2501 ntTSL 5 BASIC3.76□□□□□ -1.81
CBX4O00257 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
CBX4O00257 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
CBX4O00257 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.76□□□□□ -1.81
CBX4O00257 RNA5SP51-201ENST00000364750 119 ntBASIC3.76□□□□□ -1.81
CBX4O00257 RNU6-1280P-201ENST00000365211 107 ntBASIC3.76□□□□□ -1.81
CBX4O00257 RNU6-738P-201ENST00000384531 106 ntBASIC3.76□□□□□ -1.81
CBX4O00257 MIR3074-201ENST00000384885 81 ntBASIC3.76□□□□□ -1.81
CBX4O00257 AL138878.1-201ENST00000405131 347 ntBASIC3.76□□□□□ -1.81
CBX4O00257 RNU6-1245P-201ENST00000411130 106 ntBASIC3.76□□□□□ -1.81
CBX4O00257 EIF4EP2-201ENST00000422816 654 ntBASIC3.76□□□□□ -1.81
CBX4O00257 MTND3P9-201ENST00000429526 346 ntBASIC3.76□□□□□ -1.81
CBX4O00257 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC3.76□□□□□ -1.81
CBX4O00257 RPS3AP46-201ENST00000448352 682 ntBASIC3.76□□□□□ -1.81
CBX4O00257 HMGN2P7-201ENST00000456186 273 ntBASIC3.76□□□□□ -1.81
CBX4O00257 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC3.76□□□□□ -1.81
CBX4O00257 SNORD116.3-201ENST00000517176 78 ntBASIC3.76□□□□□ -1.81
CBX4O00257 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC3.76□□□□□ -1.81
CBX4O00257 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.76□□□□□ -1.81
CBX4O00257 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
CBX4O00257 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC3.76□□□□□ -1.81
CBX4O00257 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC3.76□□□□□ -1.81
CBX4O00257 AC006111.3-201ENST00000622137 383 ntBASIC3.76□□□□□ -1.81
CBX4O00257 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
CBX4O00257 OTUD4P1-201ENST00000237841 3067 ntBASIC3.76□□□□□ -1.81
CBX4O00257 AL161912.2-201ENST00000565707 3007 ntBASIC3.76□□□□□ -1.81
CBX4O00257 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.75□□□□□ -1.81
CBX4O00257 RNU6-227P-201ENST00000362865 103 ntBASIC3.75□□□□□ -1.81
CBX4O00257 RNU6-105P-201ENST00000363909 104 ntBASIC3.75□□□□□ -1.81
CBX4O00257 RNU1-100P-201ENST00000365255 165 ntBASIC3.75□□□□□ -1.81
CBX4O00257 PTMAP5-201ENST00000393073 333 ntBASIC3.75□□□□□ -1.81
CBX4O00257 UBE2Q2P12-201ENST00000414573 204 ntBASIC3.75□□□□□ -1.81
CBX4O00257 MCFD2P1-201ENST00000417812 300 ntBASIC3.75□□□□□ -1.81
CBX4O00257 AC243428.1-201ENST00000421099 264 ntBASIC3.75□□□□□ -1.81
CBX4O00257 BPY2DP-201ENST00000422208 265 ntBASIC3.75□□□□□ -1.81
CBX4O00257 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.75□□□□□ -1.81
CBX4O00257 AP000907.1-201ENST00000428428 510 ntBASIC3.75□□□□□ -1.81
CBX4O00257 AC099799.1-201ENST00000439809 192 ntBASIC3.75□□□□□ -1.81
CBX4O00257 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC3.75□□□□□ -1.81
CBX4O00257 HMGN2P10-201ENST00000448085 265 ntBASIC3.75□□□□□ -1.81
CBX4O00257 FO393415.2-201ENST00000480085 343 ntBASIC3.75□□□□□ -1.81
CBX4O00257 RPL17P19-201ENST00000489069 552 ntBASIC3.75□□□□□ -1.81
CBX4O00257 AC010265.1-201ENST00000513509 211 ntBASIC3.75□□□□□ -1.81
CBX4O00257 RN7SKP209-201ENST00000516888 304 ntBASIC3.75□□□□□ -1.81
CBX4O00257 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC3.75□□□□□ -1.81
CBX4O00257 AP000867.2-201ENST00000532468 320 ntBASIC3.75□□□□□ -1.81
CBX4O00257 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.75□□□□□ -1.81
CBX4O00257 AL162730.1-201ENST00000605734 292 ntBASIC3.75□□□□□ -1.81
CBX4O00257 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.75□□□□□ -1.81
CBX4O00257 AC090617.7-201ENST00000623952 126 ntBASIC3.75□□□□□ -1.81
CBX4O00257 MIR3199-2-201ENST00000636243 86 ntBASIC3.75□□□□□ -1.81
CBX4O00257 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
CBX4O00257 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
CBX4O00257 CDC27P3-201ENST00000635418 1910 ntBASIC3.75□□□□□ -1.81
CBX4O00257 AC073346.2-201ENST00000624724 2058 ntBASIC3.75□□□□□ -1.81
CBX4O00257 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
CBX4O00257 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.75□□□□□ -1.81
CBX4O00257 HSPA8P1-201ENST00000425843 1833 ntBASIC3.74□□□□□ -1.81
CBX4O00257 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.74□□□□□ -1.81
CBX4O00257 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.74□□□□□ -1.81
CBX4O00257 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
CBX4O00257 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
CBX4O00257 RNU6-858P-201ENST00000362436 107 ntBASIC3.74□□□□□ -1.81
CBX4O00257 RNU6-942P-201ENST00000363002 107 ntBASIC3.74□□□□□ -1.81
CBX4O00257 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
CBX4O00257 RNA5SP38-201ENST00000410750 119 ntBASIC3.74□□□□□ -1.81
CBX4O00257 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC3.74□□□□□ -1.81
CBX4O00257 AL353997.1-201ENST00000432936 108 ntBASIC3.74□□□□□ -1.81
CBX4O00257 AC106707.2-201ENST00000484182 374 ntBASIC3.74□□□□□ -1.81
CBX4O00257 AC022447.4-201ENST00000504053 364 ntBASIC3.74□□□□□ -1.81
CBX4O00257 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC3.74□□□□□ -1.81
CBX4O00257 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC3.74□□□□□ -1.81
CBX4O00257 SNORA25.10-201ENST00000515926 124 ntBASIC3.74□□□□□ -1.81
CBX4O00257 RN7SKP18-201ENST00000516005 275 ntBASIC3.74□□□□□ -1.81
CBX4O00257 SNORA31.18-201ENST00000517043 134 ntBASIC3.74□□□□□ -1.81
CBX4O00257 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC3.74□□□□□ -1.81
CBX4O00257 CBX3P8-201ENST00000532412 525 ntBASIC3.74□□□□□ -1.81
CBX4O00257 AC021739.1-201ENST00000559631 174 ntBASIC3.74□□□□□ -1.81
CBX4O00257 SUB1P3-201ENST00000564581 315 ntBASIC3.74□□□□□ -1.81
CBX4O00257 AC006157.1-201ENST00000611750 366 ntBASIC3.74□□□□□ -1.81
CBX4O00257 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
CBX4O00257 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.74□□□□□ -1.81
CBX4O00257 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.74□□□□□ -1.81
CBX4O00257 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
CBX4O00257 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
CBX4O00257 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
CBX4O00257 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC3.73□□□□□ -1.81
CBX4O00257 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.73□□□□□ -1.81
CBX4O00257 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC3.73□□□□□ -1.81
CBX4O00257 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.73□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 115.5 ms