Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 AC073648.5-201ENST00000603502 305 ntBASIC2.25□□□□□ -2.05
PDLIM1O00151 AL138889.2-201ENST00000603883 242 ntBASIC2.25□□□□□ -2.05
PDLIM1O00151 AC087045.1-201ENST00000605856 382 ntBASIC2.25□□□□□ -2.05
PDLIM1O00151 AC091834.1-201ENST00000614543 472 ntBASIC2.25□□□□□ -2.05
PDLIM1O00151 MIR6817-201ENST00000615588 66 ntBASIC2.25□□□□□ -2.05
PDLIM1O00151 AC099842.1-201ENST00000619919 596 ntBASIC2.25□□□□□ -2.05
PDLIM1O00151 USP12-203ENST00000620323 349 ntTSL 3 BASIC2.25□□□□□ -2.05
PDLIM1O00151 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC2.25□□□□□ -2.05
PDLIM1O00151 SEPT14P19-203ENST00000633205 211 ntBASIC2.25□□□□□ -2.05
PDLIM1O00151 MIR7157-201ENST00000635801 60 ntBASIC2.25□□□□□ -2.05
PDLIM1O00151 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.25□□□□□ -2.05
PDLIM1O00151 CDC27P3-201ENST00000635418 1910 ntBASIC2.25□□□□□ -2.05
PDLIM1O00151 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC2.24□□□□□ -2.05
PDLIM1O00151 RNU6-858P-201ENST00000362436 107 ntBASIC2.24□□□□□ -2.05
PDLIM1O00151 Y_RNA.359-201ENST00000365498 102 ntBASIC2.24□□□□□ -2.05
PDLIM1O00151 MIR578-201ENST00000384828 96 ntBASIC2.24□□□□□ -2.05
PDLIM1O00151 RNU6-1328P-201ENST00000410938 106 ntBASIC2.24□□□□□ -2.05
PDLIM1O00151 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC2.24□□□□□ -2.05
PDLIM1O00151 OR6C66P-201ENST00000414917 930 ntBASIC2.24□□□□□ -2.05
PDLIM1O00151 RPL21P90-201ENST00000415692 466 ntBASIC2.24□□□□□ -2.05
PDLIM1O00151 AC016831.2-201ENST00000417179 352 ntBASIC2.24□□□□□ -2.05
PDLIM1O00151 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC2.24□□□□□ -2.05
PDLIM1O00151 AL627311.1-201ENST00000431514 115 ntBASIC2.24□□□□□ -2.05
PDLIM1O00151 MTCO3P5-201ENST00000433620 714 ntBASIC2.24□□□□□ -2.05
PDLIM1O00151 RPS15AP9-201ENST00000439856 381 ntBASIC2.24□□□□□ -2.05
PDLIM1O00151 AC104058.1-201ENST00000448028 297 ntBASIC2.24□□□□□ -2.05
PDLIM1O00151 EEF1B2P7-201ENST00000451177 676 ntBASIC2.24□□□□□ -2.05
PDLIM1O00151 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
PDLIM1O00151 UBE2DNL-203ENST00000474922 222 ntBASIC2.24□□□□□ -2.05
PDLIM1O00151 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
PDLIM1O00151 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
PDLIM1O00151 AC010493.1-201ENST00000513479 292 ntBASIC2.24□□□□□ -2.05
PDLIM1O00151 RNU6-685P-201ENST00000517088 95 ntBASIC2.24□□□□□ -2.05
PDLIM1O00151 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC2.24□□□□□ -2.05
PDLIM1O00151 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC2.24□□□□□ -2.05
PDLIM1O00151 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC2.24□□□□□ -2.05
PDLIM1O00151 SUB1P2-201ENST00000556401 297 ntBASIC2.24□□□□□ -2.05
PDLIM1O00151 MIR3199-1-201ENST00000582434 88 ntBASIC2.24□□□□□ -2.05
PDLIM1O00151 PIGPP4-201ENST00000584447 307 ntBASIC2.24□□□□□ -2.05
PDLIM1O00151 AL121917.1-203ENST00000605534 577 ntBASIC2.24□□□□□ -2.05
PDLIM1O00151 uc_338.14-201ENST00000613162 166 ntBASIC2.24□□□□□ -2.05
PDLIM1O00151 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
PDLIM1O00151 AC011155.2-201ENST00000623202 216 ntBASIC2.24□□□□□ -2.05
PDLIM1O00151 AC009161.2-201ENST00000624626 138 ntBASIC2.24□□□□□ -2.05
PDLIM1O00151 AL160394.1-201ENST00000624765 724 ntBASIC2.24□□□□□ -2.05
PDLIM1O00151 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.24□□□□□ -2.05
PDLIM1O00151 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.24□□□□□ -2.05
PDLIM1O00151 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
PDLIM1O00151 MTND5P30-201ENST00000452896 1731 ntBASIC2.23□□□□□ -2.05
PDLIM1O00151 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
PDLIM1O00151 SNORD3E-201ENST00000362899 217 ntBASIC2.23□□□□□ -2.05
PDLIM1O00151 MIR518C-201ENST00000384822 101 ntBASIC2.23□□□□□ -2.05
PDLIM1O00151 MIR518D-201ENST00000385014 87 ntBASIC2.23□□□□□ -2.05
PDLIM1O00151 MIR10A-201ENST00000385043 110 ntBASIC2.23□□□□□ -2.05
PDLIM1O00151 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC2.23□□□□□ -2.05
PDLIM1O00151 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC2.23□□□□□ -2.05
PDLIM1O00151 MTCYBP5-201ENST00000423752 1135 ntBASIC2.23□□□□□ -2.05
PDLIM1O00151 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC2.23□□□□□ -2.05
PDLIM1O00151 AC004383.1-201ENST00000438135 289 ntBASIC2.23□□□□□ -2.05
PDLIM1O00151 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC2.23□□□□□ -2.05
PDLIM1O00151 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC2.23□□□□□ -2.05
PDLIM1O00151 OFD1P4Y-201ENST00000455273 1179 ntBASIC2.23□□□□□ -2.05
PDLIM1O00151 RPS29P15-201ENST00000458329 171 ntBASIC2.23□□□□□ -2.05
PDLIM1O00151 AP001324.2-201ENST00000461163 319 ntBASIC2.23□□□□□ -2.05
PDLIM1O00151 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.23□□□□□ -2.05
PDLIM1O00151 AC114781.4-201ENST00000513707 639 ntBASIC2.23□□□□□ -2.05
PDLIM1O00151 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC2.23□□□□□ -2.05
PDLIM1O00151 RNA5SP320-201ENST00000516263 124 ntBASIC2.23□□□□□ -2.05
PDLIM1O00151 RNA5SP148-201ENST00000516527 94 ntBASIC2.23□□□□□ -2.05
PDLIM1O00151 RNA5SP503-201ENST00000517047 117 ntBASIC2.23□□□□□ -2.05
PDLIM1O00151 AP002963.1-201ENST00000530590 184 ntBASIC2.23□□□□□ -2.05
PDLIM1O00151 CYCSP26-201ENST00000534107 320 ntBASIC2.23□□□□□ -2.05
PDLIM1O00151 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC2.23□□□□□ -2.05
PDLIM1O00151 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC2.23□□□□□ -2.05
PDLIM1O00151 AC234778.2-201ENST00000566241 354 ntBASIC2.23□□□□□ -2.05
PDLIM1O00151 MIR4775-201ENST00000581168 75 ntBASIC2.23□□□□□ -2.05
PDLIM1O00151 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.23□□□□□ -2.05
PDLIM1O00151 SRP54-214ENST00000630962 162 ntTSL 5 BASIC2.23□□□□□ -2.05
PDLIM1O00151 AC243829.7-201ENST00000633081 225 ntBASIC2.23□□□□□ -2.05
PDLIM1O00151 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC2.23□□□□□ -2.05
PDLIM1O00151 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
PDLIM1O00151 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC2.22□□□□□ -2.05
PDLIM1O00151 RNU6-371P-201ENST00000364283 108 ntBASIC2.22□□□□□ -2.05
PDLIM1O00151 RNU4-48P-201ENST00000365559 182 ntBASIC2.22□□□□□ -2.05
PDLIM1O00151 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC2.22□□□□□ -2.05
PDLIM1O00151 OR5H15-201ENST00000383696 930 ntBASIC2.22□□□□□ -2.05
PDLIM1O00151 RNU6-748P-201ENST00000384648 107 ntBASIC2.22□□□□□ -2.05
PDLIM1O00151 SNORA67.4-201ENST00000384688 142 ntBASIC2.22□□□□□ -2.05
PDLIM1O00151 RNU2-9P-201ENST00000410194 145 ntBASIC2.22□□□□□ -2.05
PDLIM1O00151 CDK8P2-201ENST00000415020 547 ntBASIC2.22□□□□□ -2.05
PDLIM1O00151 AL031779.1-201ENST00000415663 330 ntBASIC2.22□□□□□ -2.05
PDLIM1O00151 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC2.22□□□□□ -2.05
PDLIM1O00151 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC2.22□□□□□ -2.05
PDLIM1O00151 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC2.22□□□□□ -2.05
PDLIM1O00151 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC2.22□□□□□ -2.05
PDLIM1O00151 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC2.22□□□□□ -2.05
PDLIM1O00151 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC2.22□□□□□ -2.05
PDLIM1O00151 MTATP6P26-201ENST00000445926 662 ntBASIC2.22□□□□□ -2.05
PDLIM1O00151 AC132479.1-201ENST00000449160 144 ntBASIC2.22□□□□□ -2.05
PDLIM1O00151 AC012308.1-201ENST00000451232 178 ntBASIC2.22□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 167.9 ms