Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC2.55□□□□□ -2
CCDC188H7C350 CALM1P1-201ENST00000442082 433 ntBASIC2.55□□□□□ -2
CCDC188H7C350 AC025750.2-201ENST00000442609 450 ntBASIC2.55□□□□□ -2
CCDC188H7C350 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC2.55□□□□□ -2
CCDC188H7C350 RN7SL429P-201ENST00000479090 223 ntBASIC2.55□□□□□ -2
CCDC188H7C350 RN7SL489P-201ENST00000486185 223 ntBASIC2.55□□□□□ -2
CCDC188H7C350 RN7SL327P-201ENST00000488659 223 ntBASIC2.55□□□□□ -2
CCDC188H7C350 AC140059.1-201ENST00000489238 361 ntBASIC2.55□□□□□ -2
CCDC188H7C350 AC104136.1-201ENST00000512969 394 ntBASIC2.55□□□□□ -2
CCDC188H7C350 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.55□□□□□ -2
CCDC188H7C350 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC2.55□□□□□ -2
CCDC188H7C350 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC2.55□□□□□ -2
CCDC188H7C350 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC2.55□□□□□ -2
CCDC188H7C350 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.55□□□□□ -2
CCDC188H7C350 AC023824.2-201ENST00000566185 400 ntBASIC2.55□□□□□ -2
CCDC188H7C350 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC2.55□□□□□ -2
CCDC188H7C350 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC2.55□□□□□ -2
CCDC188H7C350 MIR3124-201ENST00000582636 67 ntBASIC2.55□□□□□ -2
CCDC188H7C350 AC091805.2-201ENST00000603848 235 ntBASIC2.55□□□□□ -2
CCDC188H7C350 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC2.55□□□□□ -2
CCDC188H7C350 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC2.55□□□□□ -2
CCDC188H7C350 AP001486.3-201ENST00000615334 372 ntBASIC2.55□□□□□ -2
CCDC188H7C350 RN7SL853P-201ENST00000617250 223 ntBASIC2.55□□□□□ -2
CCDC188H7C350 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.55□□□□□ -2
CCDC188H7C350 AL137790.1-201ENST00000634283 177 ntBASIC2.55□□□□□ -2
CCDC188H7C350 FO624990.1-201ENST00000636373 85 ntBASIC2.55□□□□□ -2
CCDC188H7C350 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC2.55□□□□□ -2
CCDC188H7C350 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.55□□□□□ -2
CCDC188H7C350 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
CCDC188H7C350 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.54□□□□□ -2
CCDC188H7C350 AC007336.1-201ENST00000576365 3828 ntBASIC2.54□□□□□ -2
CCDC188H7C350 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
CCDC188H7C350 RBBP8P1-201ENST00000449447 1844 ntBASIC2.54□□□□□ -2
CCDC188H7C350 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.54□□□□□ -2
CCDC188H7C350 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.54□□□□□ -2
CCDC188H7C350 Y_RNA.1-201ENST00000352915 104 ntBASIC2.54□□□□□ -2
CCDC188H7C350 SNORD114-19-201ENST00000363072 75 ntBASIC2.54□□□□□ -2
CCDC188H7C350 RNU6-371P-201ENST00000364283 108 ntBASIC2.54□□□□□ -2
CCDC188H7C350 Y_RNA.582-201ENST00000391023 95 ntBASIC2.54□□□□□ -2
CCDC188H7C350 BTF3L4P1-201ENST00000413813 468 ntBASIC2.54□□□□□ -2
CCDC188H7C350 AL353621.1-201ENST00000418219 243 ntBASIC2.54□□□□□ -2
CCDC188H7C350 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC2.54□□□□□ -2
CCDC188H7C350 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC2.54□□□□□ -2
CCDC188H7C350 MICF-203ENST00000432679 129 ntBASIC2.54□□□□□ -2
CCDC188H7C350 AL513328.1-201ENST00000446460 224 ntBASIC2.54□□□□□ -2
CCDC188H7C350 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC2.54□□□□□ -2
CCDC188H7C350 SNRPFP3-201ENST00000457792 225 ntBASIC2.54□□□□□ -2
CCDC188H7C350 RPL23AP49-201ENST00000492925 468 ntBASIC2.54□□□□□ -2
CCDC188H7C350 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC2.54□□□□□ -2
CCDC188H7C350 RNU1-86P-201ENST00000516108 154 ntBASIC2.54□□□□□ -2
CCDC188H7C350 RNA5SP367-201ENST00000516557 118 ntBASIC2.54□□□□□ -2
CCDC188H7C350 RNU1-107P-201ENST00000516617 154 ntBASIC2.54□□□□□ -2
CCDC188H7C350 AC105137.2-201ENST00000569073 466 ntBASIC2.54□□□□□ -2
CCDC188H7C350 MIR4446-201ENST00000578505 67 ntBASIC2.54□□□□□ -2
CCDC188H7C350 MIR4658-201ENST00000584344 65 ntBASIC2.54□□□□□ -2
CCDC188H7C350 RPS15AP11-201ENST00000594193 385 ntBASIC2.54□□□□□ -2
CCDC188H7C350 AC073539.2-201ENST00000597113 165 ntBASIC2.54□□□□□ -2
CCDC188H7C350 RPL12P50-201ENST00000603116 116 ntBASIC2.54□□□□□ -2
CCDC188H7C350 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC2.54□□□□□ -2
CCDC188H7C350 AC067747.1-201ENST00000608026 250 ntBASIC2.54□□□□□ -2
CCDC188H7C350 AC136475.10-201ENST00000620253 385 ntBASIC2.54□□□□□ -2
CCDC188H7C350 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.54□□□□□ -2
CCDC188H7C350 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.53□□□□□ -2
CCDC188H7C350 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC2.53□□□□□ -2
CCDC188H7C350 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC2.53□□□□□ -2
CCDC188H7C350 OR56A5-201ENST00000340110 738 ntBASIC2.53□□□□□ -2
CCDC188H7C350 RNU6-859P-201ENST00000362728 107 ntBASIC2.53□□□□□ -2
CCDC188H7C350 SNORD114-30-201ENST00000364448 72 ntBASIC2.53□□□□□ -2
CCDC188H7C350 RNU6-384P-201ENST00000364900 104 ntBASIC2.53□□□□□ -2
CCDC188H7C350 RNU5E-7P-201ENST00000365290 117 ntBASIC2.53□□□□□ -2
CCDC188H7C350 SNORA80E-201ENST00000384744 137 ntBASIC2.53□□□□□ -2
CCDC188H7C350 MIR27B-201ENST00000385129 97 ntBASIC2.53□□□□□ -2
CCDC188H7C350 RN7SKP284-201ENST00000411002 343 ntBASIC2.53□□□□□ -2
CCDC188H7C350 CYCSP48-201ENST00000417124 323 ntBASIC2.53□□□□□ -2
CCDC188H7C350 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC2.53□□□□□ -2
CCDC188H7C350 ACTR3BP6-201ENST00000422332 1241 ntBASIC2.53□□□□□ -2
CCDC188H7C350 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC2.53□□□□□ -2
CCDC188H7C350 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.53□□□□□ -2
CCDC188H7C350 EEF1B2P7-201ENST00000451177 676 ntBASIC2.53□□□□□ -2
CCDC188H7C350 AC073901.1-201ENST00000462471 408 ntBASIC2.53□□□□□ -2
CCDC188H7C350 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.53□□□□□ -2
CCDC188H7C350 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC2.53□□□□□ -2
CCDC188H7C350 RNU6-405P-201ENST00000516637 110 ntBASIC2.53□□□□□ -2
CCDC188H7C350 IL7-206ENST00000520269 456 ntTSL 3 BASIC2.53□□□□□ -2
CCDC188H7C350 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC2.53□□□□□ -2
CCDC188H7C350 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC2.53□□□□□ -2
CCDC188H7C350 AC078814.3-201ENST00000553036 491 ntBASIC2.53□□□□□ -2
CCDC188H7C350 MIR5571-201ENST00000577998 113 ntBASIC2.53□□□□□ -2
CCDC188H7C350 AC087683.1-201ENST00000591187 441 ntBASIC2.53□□□□□ -2
CCDC188H7C350 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC2.53□□□□□ -2
CCDC188H7C350 AC012507.3-201ENST00000603556 477 ntBASIC2.53□□□□□ -2
CCDC188H7C350 AC021646.1-201ENST00000605469 484 ntBASIC2.53□□□□□ -2
CCDC188H7C350 RNU6-91P-201ENST00000607774 107 ntBASIC2.53□□□□□ -2
CCDC188H7C350 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC2.53□□□□□ -2
CCDC188H7C350 AC010378.1-201ENST00000619270 362 ntBASIC2.53□□□□□ -2
CCDC188H7C350 AC048344.4-201ENST00000619744 527 ntBASIC2.53□□□□□ -2
CCDC188H7C350 AC138627.2-201ENST00000624202 601 ntBASIC2.53□□□□□ -2
CCDC188H7C350 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
CCDC188H7C350 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.52□□□□□ -2.01
CCDC188H7C350 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC2.52□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms