Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 U8.10-201ENST00000384260 133 ntBASIC0.2□□□□□ -2.38
CHKB-CPT1BH3BT56 MIR520A-201ENST00000384862 85 ntBASIC0.2□□□□□ -2.38
CHKB-CPT1BH3BT56 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC0.2□□□□□ -2.38
CHKB-CPT1BH3BT56 SNORD12-201ENST00000391002 90 ntBASIC0.2□□□□□ -2.38
CHKB-CPT1BH3BT56 DHFRP6-201ENST00000401776 268 ntBASIC0.2□□□□□ -2.38
CHKB-CPT1BH3BT56 AL356776.1-201ENST00000406574 447 ntBASIC0.2□□□□□ -2.38
CHKB-CPT1BH3BT56 TAF13P2-201ENST00000416876 286 ntBASIC0.2□□□□□ -2.38
CHKB-CPT1BH3BT56 EBAG9P1-201ENST00000418955 543 ntBASIC0.2□□□□□ -2.38
CHKB-CPT1BH3BT56 ISCA1P1-201ENST00000426679 387 ntBASIC0.2□□□□□ -2.38
CHKB-CPT1BH3BT56 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC0.2□□□□□ -2.38
CHKB-CPT1BH3BT56 RNA5SP269-201ENST00000459032 137 ntBASIC0.2□□□□□ -2.38
CHKB-CPT1BH3BT56 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC0.2□□□□□ -2.38
CHKB-CPT1BH3BT56 RNU6-113P-201ENST00000516653 101 ntBASIC0.2□□□□□ -2.38
CHKB-CPT1BH3BT56 RN7SKP49-201ENST00000516675 260 ntBASIC0.2□□□□□ -2.38
CHKB-CPT1BH3BT56 RNU6-165P-201ENST00000517170 99 ntBASIC0.2□□□□□ -2.38
CHKB-CPT1BH3BT56 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC0.2□□□□□ -2.38
CHKB-CPT1BH3BT56 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC0.2□□□□□ -2.38
CHKB-CPT1BH3BT56 AC091489.2-201ENST00000566263 604 ntBASIC0.2□□□□□ -2.38
CHKB-CPT1BH3BT56 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC0.2□□□□□ -2.38
CHKB-CPT1BH3BT56 MIR5087-201ENST00000635826 76 ntBASIC0.2□□□□□ -2.38
CHKB-CPT1BH3BT56 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.2□□□□□ -2.38
CHKB-CPT1BH3BT56 RNU6-457P-201ENST00000363999 107 ntBASIC0.19□□□□□ -2.38
CHKB-CPT1BH3BT56 RNA5SP387-201ENST00000364226 106 ntBASIC0.19□□□□□ -2.38
CHKB-CPT1BH3BT56 RNU6-945P-201ENST00000383947 107 ntBASIC0.19□□□□□ -2.38
CHKB-CPT1BH3BT56 TMSB4XP8-201ENST00000402089 135 ntBASIC0.19□□□□□ -2.38
CHKB-CPT1BH3BT56 TMSB4XP6-201ENST00000415187 135 ntBASIC0.19□□□□□ -2.38
CHKB-CPT1BH3BT56 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC0.19□□□□□ -2.38
CHKB-CPT1BH3BT56 TMSB4XP1-201ENST00000424567 135 ntBASIC0.19□□□□□ -2.38
CHKB-CPT1BH3BT56 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC0.19□□□□□ -2.38
CHKB-CPT1BH3BT56 GPM6BP2-201ENST00000432046 144 ntBASIC0.19□□□□□ -2.38
CHKB-CPT1BH3BT56 TH2LCRR-202ENST00000435042 472 ntTSL 5 BASIC0.19□□□□□ -2.38
CHKB-CPT1BH3BT56 AC002429.1-201ENST00000437672 148 ntBASIC0.19□□□□□ -2.38
CHKB-CPT1BH3BT56 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC0.19□□□□□ -2.38
CHKB-CPT1BH3BT56 GPM6BP1-201ENST00000446387 144 ntBASIC0.19□□□□□ -2.38
CHKB-CPT1BH3BT56 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC0.19□□□□□ -2.38
CHKB-CPT1BH3BT56 AC000061.1-201ENST00000456270 376 ntTSL 3 BASIC0.19□□□□□ -2.38
CHKB-CPT1BH3BT56 AL672167.3-201ENST00000465951 960 ntBASIC0.19□□□□□ -2.38
CHKB-CPT1BH3BT56 AC013828.1-201ENST00000481845 158 ntBASIC0.19□□□□□ -2.38
CHKB-CPT1BH3BT56 AC023194.1-201ENST00000493084 308 ntBASIC0.19□□□□□ -2.38
CHKB-CPT1BH3BT56 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC0.19□□□□□ -2.38
CHKB-CPT1BH3BT56 MTND5P13-201ENST00000513046 1079 ntBASIC0.19□□□□□ -2.38
CHKB-CPT1BH3BT56 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC0.19□□□□□ -2.38
CHKB-CPT1BH3BT56 RNU6-991P-201ENST00000516168 107 ntBASIC0.19□□□□□ -2.38
CHKB-CPT1BH3BT56 AL590705.4-201ENST00000532209 134 ntBASIC0.19□□□□□ -2.38
CHKB-CPT1BH3BT56 AL356057.1-201ENST00000533798 831 ntBASIC0.19□□□□□ -2.38
CHKB-CPT1BH3BT56 AL121579.1-201ENST00000555129 305 ntBASIC0.19□□□□□ -2.38
CHKB-CPT1BH3BT56 CYP4A27P-201ENST00000567218 190 ntBASIC0.19□□□□□ -2.38
CHKB-CPT1BH3BT56 AL353997.4-201ENST00000586196 166 ntBASIC0.19□□□□□ -2.38
CHKB-CPT1BH3BT56 AL353765.1-201ENST00000605514 183 ntBASIC0.19□□□□□ -2.38
CHKB-CPT1BH3BT56 MTND4P14-201ENST00000435799 1354 ntBASIC0.19□□□□□ -2.38
CHKB-CPT1BH3BT56 NUCB2-220ENST00000622082 1369 ntAPPRIS P2 TSL 5 BASIC0.19□□□□□ -2.38
CHKB-CPT1BH3BT56 DLEU2_6.3-201ENST00000340052 136 ntBASIC0.18□□□□□ -2.38
CHKB-CPT1BH3BT56 RNU6-529P-201ENST00000363383 104 ntBASIC0.18□□□□□ -2.38
CHKB-CPT1BH3BT56 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.18□□□□□ -2.38
CHKB-CPT1BH3BT56 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC0.18□□□□□ -2.38
CHKB-CPT1BH3BT56 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC0.18□□□□□ -2.38
CHKB-CPT1BH3BT56 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC0.18□□□□□ -2.38
CHKB-CPT1BH3BT56 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC0.18□□□□□ -2.38
CHKB-CPT1BH3BT56 RPL30P6-201ENST00000475925 342 ntBASIC0.18□□□□□ -2.38
CHKB-CPT1BH3BT56 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC0.18□□□□□ -2.38
CHKB-CPT1BH3BT56 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC0.18□□□□□ -2.38
CHKB-CPT1BH3BT56 RNA5SP255-201ENST00000516370 107 ntBASIC0.18□□□□□ -2.38
CHKB-CPT1BH3BT56 AC093012.1-202ENST00000549403 582 ntBASIC0.18□□□□□ -2.38
CHKB-CPT1BH3BT56 AC025423.5-201ENST00000550230 219 ntBASIC0.18□□□□□ -2.38
CHKB-CPT1BH3BT56 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC0.18□□□□□ -2.38
CHKB-CPT1BH3BT56 AC091544.4-201ENST00000555268 342 ntBASIC0.18□□□□□ -2.38
CHKB-CPT1BH3BT56 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC0.18□□□□□ -2.38
CHKB-CPT1BH3BT56 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC0.18□□□□□ -2.38
CHKB-CPT1BH3BT56 AC027807.1-201ENST00000559921 996 ntBASIC0.18□□□□□ -2.38
CHKB-CPT1BH3BT56 MIR3973-201ENST00000579824 107 ntBASIC0.18□□□□□ -2.38
CHKB-CPT1BH3BT56 AC107304.1-201ENST00000604229 296 ntBASIC0.18□□□□□ -2.38
CHKB-CPT1BH3BT56 KATNBL1P5-201ENST00000605015 517 ntBASIC0.18□□□□□ -2.38
CHKB-CPT1BH3BT56 AC080078.3-201ENST00000605407 463 ntBASIC0.18□□□□□ -2.38
CHKB-CPT1BH3BT56 AC091946.2-201ENST00000606105 291 ntBASIC0.18□□□□□ -2.38
CHKB-CPT1BH3BT56 DLEU2_6.2-201ENST00000620994 136 ntBASIC0.18□□□□□ -2.38
CHKB-CPT1BH3BT56 MIR1248-201ENST00000629190 106 ntBASIC0.18□□□□□ -2.38
CHKB-CPT1BH3BT56 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC0.18□□□□□ -2.38
CHKB-CPT1BH3BT56 AC134026.1-201ENST00000623249 2239 ntBASIC0.18□□□□□ -2.38
CHKB-CPT1BH3BT56 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC0.18□□□□□ -2.38
CHKB-CPT1BH3BT56 RNU4-79P-201ENST00000362764 141 ntBASIC0.17□□□□□ -2.38
CHKB-CPT1BH3BT56 RNU6-40P-201ENST00000384254 107 ntBASIC0.17□□□□□ -2.38
CHKB-CPT1BH3BT56 RNU6-1300P-201ENST00000391046 108 ntBASIC0.17□□□□□ -2.38
CHKB-CPT1BH3BT56 AL031577.2-201ENST00000404133 280 ntBASIC0.17□□□□□ -2.38
CHKB-CPT1BH3BT56 AL139397.2-201ENST00000404529 772 ntBASIC0.17□□□□□ -2.38
CHKB-CPT1BH3BT56 RNU2-7P-201ENST00000410794 178 ntBASIC0.17□□□□□ -2.38
CHKB-CPT1BH3BT56 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC0.17□□□□□ -2.38
CHKB-CPT1BH3BT56 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC0.17□□□□□ -2.38
CHKB-CPT1BH3BT56 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC0.17□□□□□ -2.38
CHKB-CPT1BH3BT56 RPS27AP8-201ENST00000452665 445 ntBASIC0.17□□□□□ -2.38
CHKB-CPT1BH3BT56 RNU1-131P-201ENST00000458943 161 ntBASIC0.17□□□□□ -2.38
CHKB-CPT1BH3BT56 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC0.17□□□□□ -2.38
CHKB-CPT1BH3BT56 RNU4ATAC11P-201ENST00000515939 126 ntBASIC0.17□□□□□ -2.38
CHKB-CPT1BH3BT56 RNA5SP134-201ENST00000516492 96 ntBASIC0.17□□□□□ -2.38
CHKB-CPT1BH3BT56 AC092451.2-201ENST00000538746 658 ntBASIC0.17□□□□□ -2.38
CHKB-CPT1BH3BT56 NIFKP8-201ENST00000560500 874 ntBASIC0.17□□□□□ -2.38
CHKB-CPT1BH3BT56 AC090615.1-201ENST00000577519 154 ntBASIC0.17□□□□□ -2.38
CHKB-CPT1BH3BT56 MIR4672-201ENST00000583126 81 ntBASIC0.17□□□□□ -2.38
CHKB-CPT1BH3BT56 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC0.17□□□□□ -2.38
CHKB-CPT1BH3BT56 AL589994.2-201ENST00000621124 579 ntBASIC0.17□□□□□ -2.38
CHKB-CPT1BH3BT56 AC120349.3-201ENST00000624377 529 ntBASIC0.17□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 118.8 ms