Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 RPL7P54-201ENST00000438336 674 ntBASIC2.08□□□□□ -2.08
TRIM49D1C9J1S8 AL445687.1-201ENST00000439946 251 ntBASIC2.08□□□□□ -2.08
TRIM49D1C9J1S8 AC009296.1-201ENST00000443146 155 ntBASIC2.08□□□□□ -2.08
TRIM49D1C9J1S8 AL136380.1-201ENST00000447970 162 ntBASIC2.08□□□□□ -2.08
TRIM49D1C9J1S8 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC2.08□□□□□ -2.08
TRIM49D1C9J1S8 AC233279.1-201ENST00000455300 423 ntBASIC2.08□□□□□ -2.08
TRIM49D1C9J1S8 SRRM1P2-201ENST00000464531 1192 ntBASIC2.08□□□□□ -2.08
TRIM49D1C9J1S8 HMGB1P29-201ENST00000505659 499 ntBASIC2.08□□□□□ -2.08
TRIM49D1C9J1S8 CCDC34P1-201ENST00000507441 517 ntBASIC2.08□□□□□ -2.08
TRIM49D1C9J1S8 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC2.08□□□□□ -2.08
TRIM49D1C9J1S8 RNU6-1038P-201ENST00000516516 104 ntBASIC2.08□□□□□ -2.08
TRIM49D1C9J1S8 UTP23-205ENST00000520733 369 ntTSL 3 BASIC2.08□□□□□ -2.08
TRIM49D1C9J1S8 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC2.08□□□□□ -2.08
TRIM49D1C9J1S8 AP003122.3-201ENST00000526316 255 ntBASIC2.08□□□□□ -2.08
TRIM49D1C9J1S8 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC2.08□□□□□ -2.08
TRIM49D1C9J1S8 GLYCAM1-201ENST00000546596 285 ntBASIC2.08□□□□□ -2.08
TRIM49D1C9J1S8 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC2.08□□□□□ -2.08
TRIM49D1C9J1S8 NTS-203ENST00000551529 801 ntTSL 3 BASIC2.08□□□□□ -2.08
TRIM49D1C9J1S8 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC2.08□□□□□ -2.08
TRIM49D1C9J1S8 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC2.08□□□□□ -2.08
TRIM49D1C9J1S8 MIR4435-1-201ENST00000582552 80 ntBASIC2.08□□□□□ -2.08
TRIM49D1C9J1S8 AC008945.2-201ENST00000606056 604 ntBASIC2.08□□□□□ -2.08
TRIM49D1C9J1S8 AC008536.2-201ENST00000607284 349 ntBASIC2.08□□□□□ -2.08
TRIM49D1C9J1S8 AL365204.3-201ENST00000612448 685 ntBASIC2.08□□□□□ -2.08
TRIM49D1C9J1S8 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC2.08□□□□□ -2.08
TRIM49D1C9J1S8 AL512643.1-201ENST00000635735 524 ntBASIC2.08□□□□□ -2.08
TRIM49D1C9J1S8 AC027514.1-201ENST00000588561 1603 ntBASIC2.08□□□□□ -2.08
TRIM49D1C9J1S8 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC2.08□□□□□ -2.08
TRIM49D1C9J1S8 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
TRIM49D1C9J1S8 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
TRIM49D1C9J1S8 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
TRIM49D1C9J1S8 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC2.07□□□□□ -2.08
TRIM49D1C9J1S8 OR56A5-201ENST00000340110 738 ntBASIC2.07□□□□□ -2.08
TRIM49D1C9J1S8 ZBTB8OSP1-201ENST00000342688 498 ntBASIC2.07□□□□□ -2.08
TRIM49D1C9J1S8 RNU6-884P-201ENST00000363889 107 ntBASIC2.07□□□□□ -2.08
TRIM49D1C9J1S8 RNY1P12-201ENST00000364251 105 ntBASIC2.07□□□□□ -2.08
TRIM49D1C9J1S8 SNORA68.1-201ENST00000364537 132 ntBASIC2.07□□□□□ -2.08
TRIM49D1C9J1S8 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
TRIM49D1C9J1S8 RNU6-116P-201ENST00000384042 109 ntBASIC2.07□□□□□ -2.08
TRIM49D1C9J1S8 RNU6-483P-201ENST00000384088 108 ntBASIC2.07□□□□□ -2.08
TRIM49D1C9J1S8 RNU6-217P-201ENST00000384164 104 ntBASIC2.07□□□□□ -2.08
TRIM49D1C9J1S8 RNU4-52P-201ENST00000384209 138 ntBASIC2.07□□□□□ -2.08
TRIM49D1C9J1S8 MIR767-201ENST00000390228 109 ntBASIC2.07□□□□□ -2.08
TRIM49D1C9J1S8 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
TRIM49D1C9J1S8 RNU6-550P-201ENST00000391057 101 ntBASIC2.07□□□□□ -2.08
TRIM49D1C9J1S8 SNORD115-47-201ENST00000391226 86 ntBASIC2.07□□□□□ -2.08
TRIM49D1C9J1S8 FGFR1OP2P1-201ENST00000395943 500 ntBASIC2.07□□□□□ -2.08
TRIM49D1C9J1S8 MIR1290-201ENST00000408735 78 ntBASIC2.07□□□□□ -2.08
TRIM49D1C9J1S8 RNU2-8P-201ENST00000410727 190 ntBASIC2.07□□□□□ -2.08
TRIM49D1C9J1S8 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
TRIM49D1C9J1S8 AC092047.1-201ENST00000424997 240 ntBASIC2.07□□□□□ -2.08
TRIM49D1C9J1S8 AL358075.3-201ENST00000426289 226 ntBASIC2.07□□□□□ -2.08
TRIM49D1C9J1S8 ELOCP14-201ENST00000428070 331 ntBASIC2.07□□□□□ -2.08
TRIM49D1C9J1S8 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC2.07□□□□□ -2.08
TRIM49D1C9J1S8 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC2.07□□□□□ -2.08
TRIM49D1C9J1S8 RPL36AP53-201ENST00000432891 316 ntBASIC2.07□□□□□ -2.08
TRIM49D1C9J1S8 ELOCP7-201ENST00000439968 331 ntBASIC2.07□□□□□ -2.08
TRIM49D1C9J1S8 HIGD1AP2-201ENST00000446367 280 ntBASIC2.07□□□□□ -2.08
TRIM49D1C9J1S8 WASF1P1-201ENST00000447560 1131 ntBASIC2.07□□□□□ -2.08
TRIM49D1C9J1S8 AL360271.2-201ENST00000447710 161 ntBASIC2.07□□□□□ -2.08
TRIM49D1C9J1S8 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.07□□□□□ -2.08
TRIM49D1C9J1S8 SNORD97-201ENST00000459187 142 ntBASIC2.07□□□□□ -2.08
TRIM49D1C9J1S8 AC022493.1-201ENST00000492984 337 ntBASIC2.07□□□□□ -2.08
TRIM49D1C9J1S8 AC117522.1-201ENST00000509821 380 ntBASIC2.07□□□□□ -2.08
TRIM49D1C9J1S8 AC010486.1-201ENST00000511793 424 ntBASIC2.07□□□□□ -2.08
TRIM49D1C9J1S8 AC011352.1-201ENST00000512300 793 ntBASIC2.07□□□□□ -2.08
TRIM49D1C9J1S8 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC2.07□□□□□ -2.08
TRIM49D1C9J1S8 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC2.07□□□□□ -2.08
TRIM49D1C9J1S8 AC011979.2-201ENST00000527568 352 ntBASIC2.07□□□□□ -2.08
TRIM49D1C9J1S8 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC2.07□□□□□ -2.08
TRIM49D1C9J1S8 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC2.07□□□□□ -2.08
TRIM49D1C9J1S8 RPS3AP4-201ENST00000555161 764 ntBASIC2.07□□□□□ -2.08
TRIM49D1C9J1S8 AL118558.2-201ENST00000556294 238 ntBASIC2.07□□□□□ -2.08
TRIM49D1C9J1S8 AL391261.3-201ENST00000557194 520 ntBASIC2.07□□□□□ -2.08
TRIM49D1C9J1S8 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC2.07□□□□□ -2.08
TRIM49D1C9J1S8 RPS3AP23-202ENST00000574601 686 ntBASIC2.07□□□□□ -2.08
TRIM49D1C9J1S8 MIR4298-201ENST00000584380 73 ntBASIC2.07□□□□□ -2.08
TRIM49D1C9J1S8 AC073539.2-201ENST00000597113 165 ntBASIC2.07□□□□□ -2.08
TRIM49D1C9J1S8 AC068790.2-201ENST00000602601 557 ntBASIC2.07□□□□□ -2.08
TRIM49D1C9J1S8 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC2.07□□□□□ -2.08
TRIM49D1C9J1S8 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
TRIM49D1C9J1S8 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC2.07□□□□□ -2.08
TRIM49D1C9J1S8 AC138627.2-201ENST00000624202 601 ntBASIC2.07□□□□□ -2.08
TRIM49D1C9J1S8 AC068137.3-201ENST00000639191 341 ntBASIC2.07□□□□□ -2.08
TRIM49D1C9J1S8 AC073869.6-201ENST00000640656 341 ntBASIC2.07□□□□□ -2.08
TRIM49D1C9J1S8 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC2.07□□□□□ -2.08
TRIM49D1C9J1S8 AC103710.2-202ENST00000641454 2853 ntBASIC2.07□□□□□ -2.08
TRIM49D1C9J1S8 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
TRIM49D1C9J1S8 RNU6-179P-201ENST00000363350 107 ntBASIC2.06□□□□□ -2.08
TRIM49D1C9J1S8 Y_RNA.245-201ENST00000364493 95 ntBASIC2.06□□□□□ -2.08
TRIM49D1C9J1S8 Y_RNA.256-201ENST00000364594 104 ntBASIC2.06□□□□□ -2.08
TRIM49D1C9J1S8 Z98749.2-208ENST00000381646 500 ntBASIC2.06□□□□□ -2.08
TRIM49D1C9J1S8 MIR454-201ENST00000390180 115 ntBASIC2.06□□□□□ -2.08
TRIM49D1C9J1S8 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC2.06□□□□□ -2.08
TRIM49D1C9J1S8 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC2.06□□□□□ -2.08
TRIM49D1C9J1S8 RNU6-1068P-201ENST00000410958 103 ntBASIC2.06□□□□□ -2.08
TRIM49D1C9J1S8 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC2.06□□□□□ -2.08
TRIM49D1C9J1S8 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC2.06□□□□□ -2.08
TRIM49D1C9J1S8 AC098614.2-201ENST00000426040 255 ntBASIC2.06□□□□□ -2.08
TRIM49D1C9J1S8 SRIP2-201ENST00000428470 166 ntBASIC2.06□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 76.6 ms