Protein–RNA interactions for Protein: A8TX70

COL6A5, Collagen alpha-5(VI) chain, humanhuman

Predictions only

Length 2,615 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5A8TX70 SNORA40.19-201ENST00000390846 128 ntBASIC0.09□□□□□ -2.4
COL6A5A8TX70 AC009310.1-201ENST00000414414 451 ntBASIC0.09□□□□□ -2.4
COL6A5A8TX70 RPS27P16-201ENST00000425758 201 ntBASIC0.09□□□□□ -2.4
COL6A5A8TX70 HNRNPDLP3-201ENST00000456745 380 ntBASIC0.09□□□□□ -2.4
COL6A5A8TX70 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.09□□□□□ -2.4
COL6A5A8TX70 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC0.09□□□□□ -2.4
COL6A5A8TX70 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC0.09□□□□□ -2.4
COL6A5A8TX70 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC0.09□□□□□ -2.4
COL6A5A8TX70 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC0.09□□□□□ -2.4
COL6A5A8TX70 MTCO2P2-201ENST00000591258 225 ntBASIC0.09□□□□□ -2.4
COL6A5A8TX70 RPL30P11-203ENST00000598995 310 ntBASIC0.09□□□□□ -2.4
COL6A5A8TX70 AL132822.1-201ENST00000617063 513 ntBASIC0.09□□□□□ -2.4
COL6A5A8TX70 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC0.09□□□□□ -2.4
COL6A5A8TX70 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC0.08□□□□□ -2.4
COL6A5A8TX70 RNU6-349P-201ENST00000362402 107 ntBASIC0.08□□□□□ -2.4
COL6A5A8TX70 RPL36AP53-201ENST00000432891 316 ntBASIC0.08□□□□□ -2.4
COL6A5A8TX70 AC023347.2-201ENST00000433994 462 ntBASIC0.08□□□□□ -2.4
COL6A5A8TX70 AL163195.1-201ENST00000496941 348 ntBASIC0.08□□□□□ -2.4
COL6A5A8TX70 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC0.08□□□□□ -2.4
COL6A5A8TX70 AP001328.1-201ENST00000528550 176 ntBASIC0.08□□□□□ -2.4
COL6A5A8TX70 AP003066.2-201ENST00000529375 555 ntBASIC0.08□□□□□ -2.4
COL6A5A8TX70 MIR3678-201ENST00000578455 94 ntBASIC0.08□□□□□ -2.4
COL6A5A8TX70 AC069114.2-201ENST00000604699 304 ntBASIC0.08□□□□□ -2.4
COL6A5A8TX70 AC110792.4-201ENST00000609843 298 ntBASIC0.08□□□□□ -2.4
COL6A5A8TX70 MIR7157-201ENST00000635801 60 ntBASIC0.08□□□□□ -2.4
COL6A5A8TX70 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC0.08□□□□□ -2.4
COL6A5A8TX70 Y_RNA.416-201ENST00000384014 113 ntBASIC0.08□□□□□ -2.4
COL6A5A8TX70 HNRNPDP2-201ENST00000406475 478 ntBASIC0.08□□□□□ -2.4
COL6A5A8TX70 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC0.08□□□□□ -2.4
COL6A5A8TX70 snoU13.4-201ENST00000458916 104 ntBASIC0.08□□□□□ -2.4
COL6A5A8TX70 snoU13.28-201ENST00000459235 104 ntBASIC0.08□□□□□ -2.4
COL6A5A8TX70 MTND1P16-201ENST00000465177 898 ntBASIC0.08□□□□□ -2.4
COL6A5A8TX70 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC0.08□□□□□ -2.4
COL6A5A8TX70 AF213884.2-201ENST00000510417 903 ntBASIC0.08□□□□□ -2.4
COL6A5A8TX70 AP003122.4-201ENST00000530980 758 ntBASIC0.08□□□□□ -2.4
COL6A5A8TX70 AC130650.1-201ENST00000570581 415 ntTSL 2 BASIC0.08□□□□□ -2.4
COL6A5A8TX70 AC073544.2-201ENST00000601155 540 ntBASIC0.08□□□□□ -2.4
COL6A5A8TX70 AC099654.5-201ENST00000636479 350 ntBASIC0.08□□□□□ -2.4
COL6A5A8TX70 MIR506-201ENST00000384998 124 ntBASIC0.07□□□□□ -2.4
COL6A5A8TX70 AGR3-202ENST00000402239 563 ntTSL 2 BASIC0.07□□□□□ -2.4
COL6A5A8TX70 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC0.07□□□□□ -2.4
COL6A5A8TX70 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC0.07□□□□□ -2.4
COL6A5A8TX70 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC0.07□□□□□ -2.4
COL6A5A8TX70 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC0.07□□□□□ -2.4
COL6A5A8TX70 AC093023.1-201ENST00000547375 507 ntBASIC0.07□□□□□ -2.4
COL6A5A8TX70 AC107954.1-201ENST00000565906 727 ntBASIC0.07□□□□□ -2.4
COL6A5A8TX70 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC0.07□□□□□ -2.4
COL6A5A8TX70 RNU6-968P-201ENST00000384076 107 ntBASIC0.07□□□□□ -2.4
COL6A5A8TX70 RNU6-348P-201ENST00000384386 107 ntBASIC0.07□□□□□ -2.4
COL6A5A8TX70 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.07□□□□□ -2.4
COL6A5A8TX70 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC0.07□□□□□ -2.4
COL6A5A8TX70 RPL30P7-201ENST00000479312 323 ntBASIC0.07□□□□□ -2.4
COL6A5A8TX70 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC0.07□□□□□ -2.4
COL6A5A8TX70 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC0.07□□□□□ -2.4
COL6A5A8TX70 AP001893.2-201ENST00000526949 202 ntBASIC0.07□□□□□ -2.4
COL6A5A8TX70 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC0.07□□□□□ -2.4
COL6A5A8TX70 AC090888.1-201ENST00000561335 1141 ntBASIC0.07□□□□□ -2.4
COL6A5A8TX70 AC092354.1-201ENST00000606057 376 ntBASIC0.07□□□□□ -2.4
COL6A5A8TX70 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC0.07□□□□□ -2.4
COL6A5A8TX70 RNU6-514P-201ENST00000384208 107 ntBASIC0.06□□□□□ -2.4
COL6A5A8TX70 AL034374.1-201ENST00000406329 351 ntBASIC0.06□□□□□ -2.4
COL6A5A8TX70 HSPE1P13-201ENST00000451143 297 ntBASIC0.06□□□□□ -2.4
COL6A5A8TX70 SNORD54-201ENST00000459159 67 ntBASIC0.06□□□□□ -2.4
COL6A5A8TX70 MIR892C-201ENST00000516410 77 ntBASIC0.06□□□□□ -2.4
COL6A5A8TX70 AC107953.1-201ENST00000522216 297 ntBASIC0.06□□□□□ -2.4
COL6A5A8TX70 AC091489.2-201ENST00000566263 604 ntBASIC0.06□□□□□ -2.4
COL6A5A8TX70 MIR6134-201ENST00000617606 109 ntBASIC0.06□□□□□ -2.4
COL6A5A8TX70 MIR6738-201ENST00000619620 64 ntBASIC0.06□□□□□ -2.4
COL6A5A8TX70 Y_RNA.311-201ENST00000365068 96 ntBASIC0.06□□□□□ -2.4
COL6A5A8TX70 HMGN2P39-201ENST00000398005 273 ntBASIC0.06□□□□□ -2.4
COL6A5A8TX70 AC010409.1-201ENST00000487382 476 ntBASIC0.06□□□□□ -2.4
COL6A5A8TX70 SCARNA3-201ENST00000517097 143 ntBASIC0.06□□□□□ -2.4
COL6A5A8TX70 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC0.06□□□□□ -2.4
COL6A5A8TX70 AC105224.1-201ENST00000587055 421 ntBASIC0.06□□□□□ -2.4
COL6A5A8TX70 Y_RNA.190-201ENST00000363964 101 ntBASIC0.05□□□□□ -2.4
COL6A5A8TX70 AC069282.1-201ENST00000411911 526 ntBASIC0.05□□□□□ -2.4
COL6A5A8TX70 HMGB1P35-201ENST00000503360 598 ntBASIC0.05□□□□□ -2.4
COL6A5A8TX70 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC0.05□□□□□ -2.4
COL6A5A8TX70 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC0.05□□□□□ -2.4
COL6A5A8TX70 SCARNA16.5-201ENST00000517114 183 ntBASIC0.05□□□□□ -2.4
COL6A5A8TX70 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC0.05□□□□□ -2.4
COL6A5A8TX70 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC0.05□□□□□ -2.4
COL6A5A8TX70 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC0.05□□□□□ -2.4
COL6A5A8TX70 AC012435.1-202ENST00000568772 240 ntBASIC0.05□□□□□ -2.4
COL6A5A8TX70 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC0.05□□□□□ -2.4
COL6A5A8TX70 AC007363.1-201ENST00000604736 620 ntBASIC0.05□□□□□ -2.4
COL6A5A8TX70 AC068276.1-201ENST00000605793 379 ntBASIC0.05□□□□□ -2.4
COL6A5A8TX70 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC0.05□□□□□ -2.4
COL6A5A8TX70 SNORA32.1-201ENST00000364514 115 ntBASIC0.05□□□□□ -2.4
COL6A5A8TX70 RNU6V-201ENST00000384105 107 ntBASIC0.05□□□□□ -2.4
COL6A5A8TX70 RNU2-63P-201ENST00000410792 194 ntBASIC0.05□□□□□ -2.4
COL6A5A8TX70 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC0.05□□□□□ -2.4
COL6A5A8TX70 RNFT1P2-201ENST00000443064 757 ntBASIC0.05□□□□□ -2.4
COL6A5A8TX70 GAPDHP17-201ENST00000449858 1001 ntBASIC0.05□□□□□ -2.4
COL6A5A8TX70 RPL18AP17-201ENST00000455326 198 ntBASIC0.05□□□□□ -2.4
COL6A5A8TX70 MRPS36P4-201ENST00000534436 298 ntBASIC0.05□□□□□ -2.4
COL6A5A8TX70 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC0.05□□□□□ -2.4
COL6A5A8TX70 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC0.05□□□□□ -2.4
COL6A5A8TX70 AL713866.2-201ENST00000603579 219 ntBASIC0.05□□□□□ -2.4
COL6A5A8TX70 AL021997.1-201ENST00000605757 193 ntBASIC0.05□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 129.2 ms